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z-NanoBioTechnology Final
BSC3424 Fall 2009 Dr. J. Manuel Perez Dr. Swadeshmukul Santra
52
Biology
Undergraduate 3
12/01/2009

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Term
What are the unique properties of nanomaterials
Definition
Fluorescence, Paramagnitivity, Catalytic Property
Term
MultiModal
Definition
Term
Larmor frequency
Definition
frequency equal to the frequency of the photon which would cause a transition between the two energy levels of the spin. (x,y)
Term
T1
Definition
T1 is the time to reduce the difference between the longitudinal magnetization (MZ) and its equilibrium value by a factor of e
Term
T2
Definition
T2 is always less than or equal to T1. The net magnetization in the XY plane goes to zero and then the longitudinal magnetization grows in until we have Mo along Z.
Term
T1 contrast
Definition
T1-weighting causes fiber tracts (nerve connections, i.e. white matter) to appear white,
congregations of neurons (i.e. gray matter) to appear gray andcerebrospinal fluidtoappeardarkgray, and cerebrospinal fluidto appear dark.
Term
T2 contrast
Definition
In a T2-weighted image, the contrast of "white matter," g g"gray matter'" and "cerebrospinal fluid" is reversed
Term
Chelation
Definition
Chelation is the formPFCation or presence of two or more separate bindings between a polydentate ligand and a single central atom. [1] Usually these ligands are organic compounds, and are called chelants, chelators, chelating agents, or sequestering agents.

The ligand forms a chelate complex with the substrate. Chelate complexes are contrasted with coordination complexes with monodentate ligands, which form only one bond with the central atom.

Chelants, according to ASTM-A-380, are "chemicals that form soluble, complex molecules with certain metal ions, inactivating the ions so that they cannot normally react with other elements or ions to produce precipitates or scale."
Term
Gd (chelate)
Definition
This water molecule interact/exchange with the gadolinium chelateWithout this interaction Gd-DTPA cannot create an MRI contrast
A completely chelated Gd is useless as an MRI contrast agent
Less chelation is better for contrast, but no for toxicity
Term
Why Iron Oxide Nanoparticles?
Definition
They are superparamagnetic
They are not magnetic until they are in the presence of an external magnetic field (external magnet)
The induced nanoparticle magnetic field affects the NMR/MRI signal of neighboring water molecules
H20.
They are biodegradable and non-toxic
Term
Absorption Coefficient of Light in Tissue
Definition
Decreases with wavelength. (purple=most, red=least)
Term
Gold chemical and catalytic properties
Definition
Gold nanospheres/nanorods have a high affinity for thiol containing molecules and polymers
Term
Iron Oxide chemical and catalytic properties
Definition
Iron oxide nanospheres/nanorods have a high affinity for carboxylated molecules and polymers
Iron oxide nanospheres/nanorods also bind molecules containg hydroxyl groups and hydroxylated polymers.
Term
Polymer coating
Definition
One can entrap molecules (dyes, drugs) within polymeric cavities.
Caution! (fluorophore quenching)
Term
MRI vs Xray CT
Definition
Xray CT uses ionizing Xray radiation and it is good for dense tissues (bone, coins and nails)

MRI uses radiofrequency signals and a magnetic field and it is good for soft, non-calcified tissues (muscle, cartilages, and Kiwi)
Term
Size of polymer coating is important
Definition
Nanoparticles coated with the 500 K dextran gives the best
Term
top down
Definition
Breaking things into nano sized particles

Micro- and nano-electromechanical systems
BioMEMS
Microarrays and nanoarrays
Dip Pen Nanolithography for nanoarrays
Protein nanoarrays
Microfluidics and nanofluidics
Nanotechnology on a chip
Microfluidic chips for nanoliter volumes
Nanogen's NanoChip

L.2
Term
Dip-Pen Nanolithography
Definition
[image]

L.2
Term
bottom up
Definition
Building nano particles from the molecule up

Nanoparticles
Quantum dots (Qdots)
Gold nanoparticles
Silica nanoparticles
Paramagnetic and superparamagnetic nanoparticles
Fluorescent nanoparticles

Nanostructures
Nanoshells
Nanotubes
Polymer nanofibers
Nanowires
Fullerenes
Dendrimers
Nanorods
Nanoneedles

L.2
Term
Nanobiotechnology in drug delivery
Definition
Viruses as nanomaterials for drug delivery

Nanoparticle-based drug delivery
Gold nanoparticles as drug carriers
Calcium phosphate nanoparticles
Cyclodextrin nanoparticles for drug delivery
Dendrimers for drug delivery
Fullerene conjugate for intracellular delivery of peptides
Polymer nanoparticles
Ceramic nanoparticles
Liposomes

Nanotubes
Lipid-protein nanotubes for drug delivery
Carbon nanotubes for drug delivery

L.2
Term
What is Nanotechnology?
Definition
between approximately 1 and 100 nanometers
different properties and manipulation of these particles
L.1
Term
Nanotechnology vs. Nanobiotechnology
Definition
Nanotechnology is the creation and utilization of materials, devices, and systems through the control of matter on the nanometer-length scale (a nanometer is one billionth of a meter.

Nanobiotechnology, an integration of physical sciences, molecular engineering, biology, chemistry and biotechnology holds considerable promise of advances in pharmaceuticals and healthcare.
L.1
Term
Photolithography
Definition
1. A laser beam writes circuit pattern for a microchip on a layer of light sensitive polymer that rests on a layer of chromium and a glass substrate. polymer struck by laser is removed.
2. Exsposed chromium is also removed, the rest of the polymer is dissolved.
3. UV light is directed at mask. Light passes through gaps in chromium as a lens shrinks the pattern by focusing the light onto a layer of photoresist on a silicon wafer
4. Exposed parts of photoresist removed alowing replication of the replication of pattern in miniature on silicon chips
L.3
Term
Soft-lithography
Definition
Elastic stamp, Microcontact Printing, Micromolding in Capillaries
L.3
Term
Elastic Stamp (Softlithography)
Definition
1. Liquid precursor to polydimethylsiloxane (PDMS) is poured over a bas-relief master produced by photolithography or electron-beam lithography.
2. Liquid is cured into a rubbery solid that matches the original pattern.
3. PDMS stamp is peeled off the master.
L.3
Term
Microcontact Printing
Definition
1. PDMS stamp is inked with solution consisting of organic molecules (thiols) and then pressed against a thin film of gold on a silicon plate.
2. Thiols form a self-assembled monolayer on the gold surface reproducing the stamp's pattern. (fetures in this pattern are as small as 50 nanometers)
L.3
Term
Micromolding in Capillaries
Definition
1. PDMS stamp placed on hard surface and a liquid polymer flows into the recesses between the surface and the stamp.
2. Polymer solidifies into the desired pattern. (May contain features smaller than 10 nanometers)
L.3
Term
Scanning Tunneling Microscopy
Definition
Allows scientists to see and manipulate individual atoms.
L.3
Term
Nanofabrication
Definition
Photolithography, Soft Lithography, Scanning probe Methods, Bottom-Up Methods
L.3
Term
Quantum Dot Assembly
Definition
1. A chemical reaction brings together cadmium ions, selenium ions, and organic molecules.
2.Organic molecules act as surfactants, binding to the surface of the cadmium selenide crystal as it grows.
3. When crystal reaches its optimum size, organic molecules coat the surface in a stable packing.
L.3
Term
Biomolecular Motor
Definition
L.3
Term
Self-assembled monolayer (SAM)
Definition
Surfaces consisting of a single layer of molecules on a substrate.
Term
Nanoring Array
Definition
1. Print hydrophilic SAM to Hyrophobic substrate 2. Condense water 3. Cover with chloroform polymer solution 4. Evaporate Chloroform 5. Evaporate water
L.4
Term
patterning the solid state/direct solid-state synthesis
Definition
1. Dip-coat metal salt solution on SAM printed substrate 2. Dry drops vertically 3. Heat 4. Solid state nanodots
L.4
Term
Transfer printing of thin films
Definition
Deposit gold from PDMS stamp onto GaAs then second printing on top or ICP etch
L.4
Term
Electrostatic Patterning
Definition
1. Ink PDMS with HS(CH2)nX- on Au 2. Wash with HS(CH2)nY+ L.4
Term
Reversibly switching SAMs
Definition
UV light - cis isomer formation increase in surface free energy. Blue light - trans isomer formation octyl chain-low surface energy (capture of a microshere by an oil droplet by photoinducing an inchworm-like motion in the droplet.) L.4
Term
Electrowettability switch
Definition
Precursor monolayer -hydrolysis-> Hydrophilic monolayer then e- switch L.4
Term
DPN Surfaces
Definition
Au:Alkenthiols
Silicon and Glass:Silanes
Term
Aspect Ratio
Definition
of a two dimensional shape is the ratio of its longer dimension to its shorter dimension.
Term
Strategies for achieving 1D growth
Definition
a) dictation by the anisotropic crystallographic structure of a solid b) confinement by liquid droplet as in the vapor-liquid-solid process c) direction through the use of a template d) kinetic control provided by capping reagent e) self-assembly of nanostructures f) size reduction of a 1D microstructure
Term
Qdot synthesis (CdO)
Definition
1. Nuceation 2. Growth 3. Purification
Term
Qdot Surface modification
Definition
Purification (-S-CH2-COO(-)Qdot)
Term
Qdot synthesis in W/O microemulsion
Definition
Water and oil -Surfactant-> water-pool (nano-reactor) surounded by surfacant molecules. Mix Cd and S microemulsions, intermicelle exchange, thiol capping, micelle disruption, and functionalized particles can be isolated by centrifugation or by precipitation.
Term
Surface States
Definition
Nonradiative relaxation by trapping electrons and holes
Term
Surface Passivation
Definition
Organic Passivation and Inorganic Passivation
Term
Organic Passivation
Definition
Selective site passivation, Steric effects (bulky large organic molecules), Partial surface coverage.
Term
Inorganic Passivation
Definition
Core/Shell, Epitaxial growth of shell with wider band gap (effective surface coverage, robust passivation, carrier confinement by shell barrier), Enhanced Quantum Efficiency, Improved Photostability.
Term
Core vs. Core-Shell Qdots
Definition
Shell of a higher band-gap material (ZnS) improves stability and brightness of Qdots
Term
CdS:Mn/ZnS development for bioimaging applications
Definition
First generation: Bright fluoresence, Radio-opaque, paramagnetic (WEAK), Ultra-small (3.1nm), Photostable. Second generation: Bright fluoresence, Radio-opaque, paramagnetic (STRONG), Small (7.5nm), Photostable.
Term
Qdot based sensing
Definition
Advantages: Sensitivity (core, Qdots), Selectivity (shell, ligand), Photostability (core, Qdots)
Term
FRET
Definition
fluorescence resonance energy transfer
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