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viruses
alyssa valdez
116
Microbiology
Undergraduate 3
07/25/2012

Additional Microbiology Flashcards

 


 

Cards

Term
Early development of Virology
Definition

Many Epidemics of viral diseases occured before anyone understood the nature of their causative agents

 

Term

Early Attempts to prevent viral diseases

 

 

 

 

 

 

 

 

 

Definition

Lady Wortley Montagu ( 1700s)- Inoculated children with material from small pox lesion, got idea from turkish women

 

Edward Jenner ( 1798) - tried to prevent small pox by exposure to cow pox

Term

Discovery of viruses 1800s

 

* Charles Chamberland

 

* Dimitri Ivanowski

Definition

* invented a porcelein bacterial filter used later in the discovery of viruses

 

* Demonstrated that causative agent of tobacco mosaic diease passed through bacterial filters, thought agent was toxin

 

 

 

 

 

Term

Discovery of Viruses

 

* Martinus Beijerinick

Definition
showed that the causative agent of tabacco mosaic disease was still infectious after filtration referred to agent as filterable virus
Term
Loeffler and Frosch
Definition
showed that hoof and mouth disease in catte was caused by a virus
Term
Walter Reed
Definition
Showed tht yellow fever in humans was caused by a filterable virus transmitted by a mesquito
Term
Ellerman and Bang
Definition
Showed that Leukemia in chiickens was caused by the virus
Term
Peyton Rous
Definition
Showed that muscle tumor in chicken was caused by a virus
Term
Fredrick Twort
Definition
first to isolate viruses that infect bacteria ( bacteriophages)
Term

Felix d'Helle

did what 3 things

Definition

Firmly estabished the existance of bacteriophages

Devised method for enumerating them

demonstrated that bactreriophages only reproduce in live bacteria

Term
Are viruses living or non-living entities
Definition
non-living entities
Term
Are viruses considered living organisms?
Definition
no
Term
Can virused infect organisms of all life forms?
Definition
yes
Term
 Viruses are Obligate intercellular parasites
Definition
True
Term
Are viruses able to reproduce outside a living cell?
Definition
no
Term
Viruses
Definition

Simple organism

DNA or RNA not both

unable to reproduce outside of living cell

obligate intercellular parasite

Term
Cellular organisms
Definition

Complex organism

Both DNA and RNA

carry out cell division

some are obligate intracellular parasites

Term
True of False some cellular organisms are obligate intracellular parasites
Definition
true
Term
Virion
Definition
complete virus particle
Term
what does a virion consist of
Definition
nucleic acid surrounded by a protein coat
Term
The protein of a virus is termed what
Definition

a capsid

 

Term
what is the capsid (protein coat) of a virus composed of
Definition
capsomeres
Term
What is the main purpose of the protein coat (capsid) of a virus
Definition
To protect genome and aids in transfer between host cells
Term
True or false sometimes enzymes are included within the capsid
Definition
true
Term
Many capsids have additional layers?
Definition
true
Term
Virions ( the complete virus particle) can be Naked or enveloped true or false
Definition
True
Term
Naked Virions
Definition
are without an envelope
Term
Virions with an envelope are
Definition
surrounded by a lipid mebrane
Term
Viral envelopes
Definition
membrane structures aurrounding some viruses
Term
Lipid and carbohydrates in the virus envelope are usually derived from
Definition
host membranes
Term
Peplomers
Definition
(spikes) are proteins in the envelope and are virus specific
Term
Do viruses have different shapes?
Definition
yes
Term
Helical capsids
Definition
shaped like hollow tube with protein walls
Term
Icosahedral Capsid
Definition
Regular polyhedron with 20 equilateral triangular faces and 12 vertices
Term
What is a complex virus
Definition
viruses with capsids of complex symmetry
Term
A viral genome contains how many types of nucleic acid
Definition

1

either DNA of RNA never both

Term
A viral genome can be single stranded or double stranded and can be linear or circular?
Definition
true
Term
Viruses can only multiply inside metabolizing cell?
Definition
true, use host machinary to support reproduction
Term
Every virus contains information to-
Definition

make viral proteins

assure replication

move in and out of host cell

Term
What two phases do viruses live in
Definition

extracellular phase

metaboliclly inert

intracellular phase

metabolically active

Term
Bacteriophage classification are based on two major criteria
Definition

phage morphology

nucleic acid properties

Term
When the virus enters the host cell the effect on the cell depends on the
Definition
infecting phage
Term
the infecting bacteriophage can infect the host cell in two ways
Definition
Some phages multiply in host cell, producing numerous progeny but other phages integrate into host genome
Term
The lytic cycle of viral reproduction
Definition
Viral life cycle that cumulates with host cell bursting, releasing viral particles
Term
The lytic cycle involving virulous agents
Definition
lyse their host cells during the reproductive cycle
Term
5 stages of viral reproduction
Definition

- absorbtion/ attachment

-penetration

- synthesis

-assembly

-release

Term

penetration

and uncoating during penetration

Definition

entrance of the virus or its nucleic acid into the host cell

viral genome is released

Term
synthesis
Definition
production of viral nucleic acid and protein
Term
assembly
Definition
making the viral particles
Term
release
Definition
viral particles are leaving the cell
Term

The lytic cyles:

absorbtion / attachment

Definition

The phage collide by chance with the bacteria

the base plate with its tail spikes settles in on the surface of the bacterium

Term
Receptor sites during absorbtion/attachment of the lytic cycle
Definition

specific surface structure on host of which viruses attach they are specific for each virus

some can be lipopolysacharides, techoic acids..etc

Term
During the lytic cycle : attachment and penetration
Definition
The bacterial viruses inject the nucleic acid into the host through the cell
Term

Synthesis of the lytic cycle

Sequential steps

Definition

duplication of viral components is a sequential process

 1. Virus will inhibit activity of the host DNA

-Viruses produce enzymes to destroy host DNA

2. Viral DNA takes over anf begins transcribing mRNA

-early mRNA synthesis

- Late mRNA synthesis

Term
Early mRNA synthesis
Definition
early viral proteins are associated with the replication of viral nucleic acid
Term
Late mRNA synthesis
Definition
encode capsid proteins and other proteins needed for phage assembly
Term
Assembly
Definition
The protein structures of the phage such as heads, tails,tail spikes and tail fibers are synthesized independantly of one another, the replicated viral components are assembled into an intact, mature virus particle
Term
scaffolding protein
Definition
viral encoded proteins aid in construction of procapsid
Term
Realease of Phage particles during the lytic cycle
Definition
T4 lysis of host is brought about by several proteins
Term
two examples of the many proteins that are involved in T4 lysis of the host cell
Definition

endolysin- attack peptidoglycan

holin- produces lesions in the cell membrane

Term
Other things that help T4 lysis of host cell
Definition
production of enzymes that disrupt cell wall construction, host cell bursts and releases viruses to the outside enviroment
Term
How many pathways are there to the lytic cycle
Definition
two
Term
Viral reproduction: lysogeny
Definition
a- non lytic relationship between a virus and its host, usually involves viral genome into host DNA, contains a prophage
Term
Twp types of viral reproduction
Definition

lytic cycle- virus replicates in the cell and the cell eventually burts

lysogeny- the virus integrates viral genome into host DNA

Term
prophage
Definition
integrated phage genome
Term
Temperate phage
Definition
phage able to resist lysogeny
Term

lysogens

 

Definition
Lysogenic bacteria, infected bacteria host
Term
An example of lysogeny
Definition
Lambda Virus
Term
Lambda Virus
Definition

lysogeny begins like the lytic cycle

attachment/absorbtion

penetration...

double stranded DNA phage

 its genome circularizes upon entry into the host

 

Term
How is Lysogeny and the lytic cycle controlled
Definition

incorporation depends on the production and competition of two regular proteins:

Lambda repressor

Cro protein

Term
lambda repressor
Definition
blocks transcription of the lytic genes, including cro genes
Term
cro protein
Definition

involved in regulating lytic cycle genes

blocks the synthesis of the lambda repressor

Term
How do we know which repressor becomes functional first
Definition
it depends on the various circumstannces and is not completely understood
Term
during lysogeny and lytic control if the lambda repressor wins the competition
Definition

then the viral nucleic acid will incorporate into the host chromosome, and integrase will catalyse integration

the viral DNA is replicated only when the host cell replicates, this allows for the population of the bacterial cells to carry viruses

Term
what happens during the lytic/lysogeny cycle when the cro protein wins
Definition
the lytic cycle occurs
Term
During lysogeny/ lytic control once incorporated the repressor protein continues to be produced at low levels this process is reversable
Definition
true
Term
induction
Definition
phage production is initiated
Term
What is induction triggered by
Definition
damage to chromosomal DNA ( SOS repair causes drop in repressor protein), the excising of the viral genome initiates the lytic cycle
Term
the excising of the viral genome initiated the lytic cycle
Definition
true
Term
during lysogenic conversion prophage can cause change in the
Definition
host phenotype
Term
Lysogenic conversion the phage DNA is not completly suppressed because
Definition
the gene coding for the new trait are expressed in the bacterium
Term
filamentous phages
Definition
single stranded DNA viruses that appear as long thin filaments, some of these phages do not undergo lysogeny pr follow the lytic cycle, the infected bacteria continue to grow and reproduce, the viral genome and proteins are also produced
Term
filamentous phages
Definition

the virion is extruded from the cell

the capsid proteins are stored in the bacterial membrane

as the DNA is extruded, the virion is assembled

this occurs continuously and the infected cells are the carriers

Term

Transduction

 

Definition

bacteria DNA that is transferred from donor to recipitant via bacteriophage two types

generalized and specialized

Term
generalized tranduction
Definition
any gene of donor can be transferred
Term
specialized transduction
Definition
only specific genes can be transferred
Term
generalized transduction
Definition

any part of the bacterial genome can be transferred

occurs during the lytic cycle of virus replication

during viral assembly, fragments of host DNA are mistankenly packed into phage head forming generalized transducing particles

Term
embly
Definition
Term
specialized transduction is also called
Definition
restrictiong transduction
Term
specializeds transduction is carrier out only by
Definition
temperate phages that have established lysogeny, only specific portion of bacterial genome is transferred
Term
when  does specialized transduction occur
Definition
when prophage is incorrectly excised
Term
the bacterium containnig prophage during specialized transduction
Definition

induction occurs and begins viral replication

the excised genome contains a portion of the bacterial chromosome

Term
what contains the altered DNA in specialized transduction
Definition
the assembled phage particles
Term
During specialized transduction virus particles are released and infect new cells, the piece of bacterial chromosome becomes incorporated into the new host genome
Definition
true
Term
host range
Definition
the number of different bacteria that a phage can infect, usually limited to a single bacteria or a single strand for a single phage
Term
two most important factors that limit host range
Definition

phage must be able to attach to host receptors

restriction-modification system of the host cell must be overcome

Term
host ranges for phages receptors on bacterial surface
Definition
vary in chemical structure and location usually on bacteria cell wall
Term

host ranges for phages receptor sites can be altered by two mechanisms

 

Definition

mutation

lysogenized bacteria can alter cell surface, which results in alteration of receptor site

Term
host ranges for phages: restriction modification system what does the restriction part do
Definition
bacteria have two genes coding for enzymes of restriction modification system, restriction enzymes that codes for endonuclease cuts small segments of DNA
Term
what does the modification part of the test do?
Definition
modification enzyme attached methyl group to DNA sequence recognizing by restriction enzyme , methylated bases are not recognized by restriction enzymed, this protects cells own DNA
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