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Unit 1
Amino acids, proteins, junctions, cytoskeletons, organelles...
39
Biology
12th Grade
09/14/2013

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Term
Amino Acids
Definition
- monomer unit of protein
- 20-22 a.a. in eukaryotes
- 9 are essential (diet)
- C,H,O,N, S, P
- variable R-group (distinct for each a.a.)
Term
Bonding and joining of Amino Acids
Definition
- condensation polymerisation reaction to join 2 together
- peptide bond links 2 (peptide bonds are covalent bonds specific to a.a)
Term
Ascending order of size
Definition
1. (Peptide): A.A
*more than one*
2. Peptide/dipeptide
*more than two*
3. Polypeptide
4. Protein (funtional)
Term
Primary Structure
Definition
- amino acid sequence of the peptide
- amino acids bound together by peptide bonds
(Sequence here determines function of protein; DNA determines sequence of a.a.)
Term
Secondary Structure
Definition
- dependent on the primary structure
- hydrogen bonds that form between individual a.a. cause the peptide
- alpha helices, beta pleated sheets & random coils form
Term
Tertiary Structure
Definition
- dependent on the secondary structure
- relationship between the alpha helices, beta sheets, coils to form a functional peptide
Term
Quaternary Structure
Definition
more than one tertiary structure come together to make a fully functional structure through hydrogen/ionic bonds
- e.g. haemoglobin
Term
Insulin
Definition
- used to regulate cellular uptake of glucose from blood
- circulates through the blood
Term
Activation of insulin
- synthesis, enzymes
Definition
Synth. in an inactive form - proinsulin
activated by a seriers of enzymes (post-translational modification)
- held together by 3 disulfide bonds
Term
Activation of insulin
- mature insulin, proinsulin
Definition
- mature insulin has 35 fewer a.a.
- proinsulin is inactive as it won't fit into the receptive areas of the cell - parts are removed for maturing
Term
DNA
Definition
- inheritable genetic material
- codes for proteins (sequence of bases)
- double stranded (H-bonds and N-bonds)
- double helix - interactions between hydroxide groups
Term
DNA - purine/pyramidine
Definition
- Thymine/Uracil and Cytosine (pyramidine)
- Adenine and Guanine (purine)
Term
mRNA
Definition
MESSENGER RNA
- carries genetic material to ribosomes for protein synthesis - in nucleus
Term
rRNA
Definition
RIBOSOMAL RNA
- makes a ribosome
Term
tRNA
Definition
TRANSFER RNA
- assists in protein synthesis by transferring a.a. (taken from cytosol) to the ribosomes - in cytosol
Term
Catabolic reactions
- relating to molecules
Definition
breaking things down
Term
Anabolic reactions
- relating to molecules
Definition
building things up
Term
Exergonic reactions
- relating to energy
Definition
release energy
Term
Endergonic reactions
- relating to energy
Definition
require energy
Term
Polymerisation
Definition
- anabolic reaction (built up)
- endergonic reaction (energy expended in bonds)
Term
Cytoskelton
Definition
- protein filament (linear) makes cells the shape they are
- strength, support, shape and movement
- internal framework of proteins
Term
Microtuble
Definition
- cytoskeleton elements with largest dimaeter
- role in mytotic spindle - cell structure - transport
a.a. --> Tubulin --> Protein --> mictrotuble
Term
Microfilament
Definition
- cytoskelton with smallest diameter
- flexible and strong
a.a --> protein --> actin --> microfilament
Term
Intermediate filament
Definition
- polymers of various proteins
- link into the cytoskelton of other animal cells, forming junctions e.g. keratin
Term
Junctions
Definition
- connect animal cells to each other
- occluding junctions
- communicating junctions
- anchoring junctions
Term
Occluding junctions
Definition
- membrances come into tight contact
- proteins from each cell attach
- nothing, not even fluids can pass
Term
Occluding junction (image)
Definition
Term
Communicating junctions
Definition
- gap junctions
- protein linked pores
- enable passage of small molecules (salt ions, sugars, a.a., electrical signals)
- can open and close to allow minerals through
Term
Communicating junctions (image)
Definition
Term
Anchoring junctions
Definition
- desmosomes (collection/complex of anchoring junctions)
- only purpose is to connect cells - cell can't communicate through these - otherwise cells wouldn't hold together
Term
Anchoring junctions (image)
Definition
Term
Plant cells connections - plasmodesma
Definition
- cell walls held togehter by pectin
- junctions exist to connect plant cell walls
plasmodesmata - plural and acts as gap, occluding and anchoring junctions
Term
Photosynthesis
Definition
- energy conversion (light to chemical in the form of glucose)
- cells that contain chlorophyll when light is available
Term
Photosynthesis equation
Definition
Term
LIGHT DEPENDENT STAGE (grana; stack of membranous sacs stacked on top of each other- one section is a granum, stack = thykaloid)
Definition
- light energy is absorbed by chlorophyll in the thylakoid membranes of the grana (stacks)
- water is split into hydrogen ions and O2
- O2 gas is released
- H+ ions are made available (picked up by NADP)
- some ATP is formed
Term
LIGHT INDEPENDENT STAGE (stroma; semi-fluid substance)
Definition
- carrier molecules brings H+
- ATP is used
- Carbon reduction occurs as CO2 is converted to sugar (H+ is added)
- occurs in the stroma
Term
Photosynthesis : Light dependent and light independent stages image
Definition
Term
Cellular Respiration
Definition
- glucose --> ATP
- small amounts of energy are GRADUALLY released in the form of ATP
(approx. 50% of the energy in an ATP molecule is lost as heat)
Term
Cellular Respiration Equation
Definition
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