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Stereochemical Terminology
Definitions of the most common terms
20
Chemistry
Graduate
09/11/2009

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Term
Absolute configuration
Definition
A designation of the position or order of arrangement of the ligands of a stereogenic unit in reference to an agreed upon stereochemical standard
Term
Achiral
Definition
Not chiral. A necessary and sufficient criterion for achirality in a rigid molecule is the presence of any improper symmetry element
Term
Achirotopic
Definition
Opposite of chirotopic (chirotopic: the term used to denote that an atom, point, group, face, or line resides in a chiral environment)
Term
Anomers
Definition
Diastereomers of glycosides or related cyclic forms of sugars that are specificially epimers at the anomeric carbon (C1 of an aldose or C2,C3,etc. of a ketose)
Term
Anti
Definition
Modern usage is to describe relative configuration of two stereogenic centers along a chain. The chain is drawn in zigzag form, and if two substituents are on opposite sides of the plan of the paper, they are designated anti.
Term
Anticlinical
Definition
A term describing a conformation about a single bond. In A-B-C-D, A and D are anticlinical if the torsion angle between them is between 90 and 150 or -90 and -150.
Term
Antiperiplanar
Definition
A term describing a conformation about a single bond. In A-B-C-D, A and D are antiperiplanar if the torsion angle between them is +150 to -150.
Term
Apical = axial, basal = equatorial
Definition
Terms associated with the bonds and positions of ligands in trigonal bipyramidal structures
Term
Asymmetric
Definition
Lacking all symmetry elements. All asymmetric molecules are chiral
Term
Asymmetric carbon atom
Definition
Traditional term used to describe a carbon with four different ligands attached. Not recommended in modern usage.
Term
Atactic
Definition
A term describing the relative configuration along a polymer backbone. In an atactic polymer, the stereochemistry is random--no particular pattern or bias is seen.
Term
Atropisomers
Definition
Stereoisomers (can be either enantiomers or diastereomers) that can be interconverted by rotation about single bonds and for which the barrier to rotation is large enough that the stereoisomers can be separated and do not interconvert readily at room temperature.
Term
Chiral
Definition
Existing in two forms that are related as non-congruent mirror images. A necessary and sufficient criterion for chirality in a rigid molecule is the absence of any improper symmetry elements
Term
Chiral center
Definition
Older term for a tetracoordinate carbon or similar atom with four different substituents. More modern, and preferable, terminology is "stereogenic center" (or "stereocenter").
Term
Chirotopic
Definition
The term used to denote an atom, point, group, face, or line resides in a chiral environment
Term
Cis
Definition
Describing the stereochemical relationship between two ligands that are on the same side of a double bond or a ring system. For alkenes only, Z is preferred.
Term
Configuration
Definition
The relative position or order of the arrangement of atoms in space that characterizes a particular stereoisomer
Term
Conformers or conformation isomers
Definition
Stereoisomers that are interconverted by rapid rotation about a single bond
Term
Constitutionally heterotopic
Definition
The same groups or atoms with different connectivities
Term
D and L
Definition
An older system for identifying enantiomers, relating all stereocenters to the sense of chirality of D- or L-glyceraldehyde. Generally not used anymore, except for biological structures such as amino acids and sugars.
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