Shared Flashcard Set

Details

Specimens (general) Respiratory Org.
Collection and transport of specimens, Respiratory diseases and organisms
40
Microbiology
Undergraduate 4
11/13/2014

Additional Microbiology Flashcards

 


 

Cards

Term

 

What is the normal cut-off time for specimen collections?

Definition

 

2 hours

Term

 

What should be indicated on the label of  specimens?

Definition
  1. Name
  2. Date and time of collection 
  3. Patien ID number/ or hospital number 
  4. Source 
  5. Type of collection
Term

 

What is the transport media Carey-Blair typically used for?

Definition
good for stool cultures or specimens that need to be held for extended period of time (mailing etc..)
Term

 

What is the transport media Amies typically used for?

Definition
Good for Neisseria gonorrhea
Term

 

What is the transport media Stuarts typically used for ?

Definition
supports transport of almost all pathogens
Term

 

What is the transport media JEMBEC typically used for?

Definition

for genital cultures that cant get to the lab in a timely fashion

 

Specifically looking for N. gonorrhoeaa

Term

 

Mouth cultures are not routinely processed-will grow URF, what is the exception?

Definition

 

Mycology cultures may be performed to rule out THRUSH (Candida albicans)

Term

 

What are you looking for in throat cultures?

Definition
Primarily used for the detection of Group A beta-hemolytic streptococci (cause of strep throat)
Term

 

If group A strep is left untreated...sequelae include...

Definition
Rheumatic Fever and Glomerulonephritis
Term
What do type of agar do you plant throat cultures on?
Definition

 

BAP - streak for isolation

Term

 

Group A rapid tests are commonly performed for throat cultures, but what is the problem with them?

Definition
Rapid tests are specific, but not sensitive...A Negative rapid test MUST be confirmed by culture
Term

 

Nasopharyngeal cultures are not routinely done, if performed they are by request and only to screen for carriers of.....

Definition

S. aureus

N. meningitidis

H. influenzae

Term
What are the steps to Nasopharyngeal cultures?
Definition
  1. Plant on BAP (STAX)/ Choc
  2. Incubate in increased CO2
  3. Special Circumstances- use Calcium alginate swab on thin nichrome wire (C. diptheriae B. pertussis)

 

Term

 

What is a Nares culture usually used for?

Definition
to rule out MRSA
Term
What are the types of Lower Respiratory Specimens?
Definition

Expectorated Sputum

Suctioned Sputum  (leukens tube)

Bronchoscopy specimen or bronchial washing  (BAL)

Bronchial Brushing 

Transtracheal Aspirate 

Lung Aspirate 

Lung Biopsy

Term
LRT specimen processing begins with...
Definition

Gram Stain 

Calulate Q-Score 

If acceptable quality..process specimen

Term
For the Q-score, sputum is evaluated at low power (10x) and neutrophils and squamous cells are graded...how many cells for a score of 0, 1, 2, or 3?
Definition
  • No cells= 0
  • 1-9= 1
  • 10-24= 2
  • >25= 3
Term

 

What plates do you innoculate when you have an acceptable quality Lower resp specimen??

Definition
BAP, MAC, and CHOC
Term

 

After BAP and MAC cultures of Lower Resp specimens have grown....whats next?

Definition

Add STAX to BAP

 

If both GN and GP appear in significant numbers...add CNA or PEA

Term

 

For Lower Resp Specimens...when do you report "Pneumo"

Definition

when you see pairs of GP diplococci, sometimes lancet shaped, encapsulated, or with blotchy appearence,

>25 pairs/oil immersion field (OIF)

Term
For Lower Resp Specimens...when do you report "Staph"
Definition

GP cocci in clusters 

>25/Oil immersion field 

Term
For Lower Resp Specimens....when do you report "yeasts"
Definition
at least one yeast cell with pseudohyphae/OIF
Term
For Lower Resp Specimens..when do you report "Enteric/Psuedomonas"
Definition
GNB >10/OIF
Term
For Lower Resp Specimens...when do you report "Bacteriodes/ Hemophilus" (B/H)
Definition
GN coccobacilli/pleomorphic > 10 /OIF
Term
For Lower Resp Specimens...when do you report "Branhamella/Acinetobacter"
Definition
Plump GN diplococci >25/OIF
Term
What are the most common pathogens of the Upper and Lower Respiratory Tract?
Definition

Strep pneumoniae

Haemophilus influenzae

Klebsiella pneumoniae and other Enterobacteriaceae

Pseudomonas aeruginosa and other "Pseudomonads"

Legionella pneumophila

Candida albicans (Thrush)

Acinetobacter spp.

Moraxella (Branhamella) catarrhalis 

Beta-hemolytic streptococci

Term

 

What are the "other" respiratory pathogens which require specialized media for isolation?

Definition

Corynebacterium diphtheriae

Mycobacterium tuberculosis and other Mycobacterium spp.

Bordetella pertussis 

Nocardia asteriods 

Mycoplasma pneumoniae

Chlamydia pneumoniae and other spp 

Pneumoncystis carinii 

Viruses ( CMV, HSV, Adeno, Influenza, etc)

Fungi including Histoplasma capsulatum and others 

Anaerobes (Prevotella melaninogenicus, Fusobacterium nucleatum etc.)

Term

 

What are the organisms considered normal upper respiratory flora? (URF)

Definition

Alpha and gamma hemolytic Streptococcus 

Staphylococcus spp (NOT aureus)

Neisseria spp (NOT meingiditis)

Corynebacterium spp (NOT diphtheriae)

Many anaerobes 

Candida spp.

Term

 

What organisms are isolated in the URT of hospitalized patients and is usually not reported unless its a chemo patients?

Definition

Klebs. pneumoniae

Ps. aeruginosa

Other Enterobacteriaceae 

Term

 

What are the causative organisms of Vincents Angina (Trench Mouth)

Definition

Borrelia vincentii (a.k.a. Bacteriodes denticola/Prevotella)

 

Fusobacterium nucleatum (now Fusobacterium necrophorum)

Term

 

In Vincents Angina (Trench mouth) what organisms predominate in the acute cases? Chronic cases?

Definition

Acute: Spirochetes

Chronic: Fusiform

Term

 

How are samples of Trench mouth tested in lab?

Definition

Direct smear with Z/N or crystal violet

 

ALOT of Spirochetes and Fusiforms will be seen

Term
What are the most likely organisms in otitis media infections?
Definition

Stp pneumoniae (25-50%)

Hem. influenzae (15-30%)

Mor. cararralis (3-20%)

Stp. pyogenes (2%)

Sth. aureus (1%)

Enterobacteriaceae (1%)

Term
What are the most likely organisms in Otitis Externa infections?
Definition

Ps. aeruginosa 

Sth. aureus 

Other aerobic bacteria

Term

 

What skin contaminants are not significant in otitis media samples?

Definition

Sth. epidermidis 

Diphtheroids

Term
A Nasopharyngeal swab is used in suscpected cases of...
Definition

Neisseria meningitidis

Bordetella pertussis

Term
Chronic Granulomatus infection of nasal passages is due to the infection of what organism?
Definition
Klebs rhinoscleromatis
Term
chronic mucopurulent nasal discharge, foul smelling, due to secondary low grade anaerobic infection of what organism?
Definition
Klebs. ozanae
Term
What is the expected flora of the nasopharyngeal?
Definition

Neisseria spp 

alpha/gamma strep

Haemophilus spp

Diphtheroids

Anaerobic Bacteria 

Strep pneumoniae

Staph

small amounts of GNB (as hospitlization increase..so does GNB)

small number of yeasts

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