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Respiration and Photosynthesis
IB Unit 3
175
Biology
12th Grade
04/07/2009

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Term

 

Fermentation
Definition
is a partial degradation of sugars that occurs without O2
Term

 

Cellular respiration
Definition

 

-includes both aerobic and anaerobic respiration but is often used to refer to aerobic respiration
Term

 

Aerobic respiration
Definition

- consumes organic molecules and O2 and yields ATP

Term

 

formula for sugar glucose:
Definition

 

C6H12O6 + 6 O2 ® 6 CO2 + 6 H2O + Energy (ATP + heat)
Term

 

The transfer of electrons during chemical reactions
Definition

 

releases energy stored in organic molecules which 
is ultimately used to synthesize ATP
Term

 

redox reactions (
oxidation-reduction reactions)
Definition

 

Chemical reactions that transfer electrons between reactants
Term

 

In oxidation
Definition

 

a substance loses electrons, or is oxidized
Term

 

In reduction
Definition

 

substance gains electrons, or is reduced (the amount of positive charge is reduced)
Term
reducing agent
Definition

 

The electron donor
Term

 

oxidizing agent
Definition

 

The electron receptor
Term

 

In cellular respiration
Definition

 

glucose and other organic molecules are broken down in a series of steps
Term

 

Electrons from organic compounds are usually
Definition

 

first transferred to NAD+, a coenzyme
Term

 

NAD+ 
Definition

 

As an electron acceptor 
functions as an oxidizing agent during cellular respiration
Term

 

 NADH
Definition

 

the reduced form of NAD+
represents stored energy that is tapped to synthesize ATP
Term

 

NADH passes the electrons to the
Definition

 

electron transport chain
Term

 

the electron transport chain
Definition

 

O2 pulls electrons down the chain in an energy-yielding tumble
The energy yielded is used to regenerate ATP
 passes electrons in a series of steps instead of one explosive reaction
Term

 

Cellular respiration has three stages:
Definition

 

Glycolysis
 
The citric acid cycle
 
Oxidative phosphorylation
Term

 

Glycolysis
Definition

 

breaks down glucose into two molecules of pyruvate
Term

 

The citric acid cycle
Definition

 

completes the breakdown of glucose
Term

 

Oxidative phosphorylation
Definition

 

accounts for most of the ATP synthesis; 90% 
 
Term

 

A smaller amount of ATP is formed in glycolysis and the citric acid cycle by
Definition

 

substrate-level phosphorylation
Term

 

Glycolysis occurs in the
Definition

 

cytoplasm
Term

 

Glycolysis  has 2 major phases:  
Definition

 

 
Energy payoff phase
Energy investment phase
Term

 

In the presence of O2, pyruvate enters the
Definition

 

mitochondrion
Term

 

Before the citric acid cycle can begin
Definition

 

pyruvate must be converted to acetyl CoA
Term

 

acetyl CoA
Definition

 

links the cycle to glycolysis
Term

 

The citric acid cycle
(the Kerbs Cycle) 
takes place within the
Definition

 

mitochondrial matrix
Term
The citric acid cycle
(the Kerbs Cycle) 
oxidizes
Definition

 

organic fuel derived from pyruvate, generating 1 ATP, 3 NADH, and 1 FADH2 per turn
Term

 

The citric acid cycle has ____ steps ....
Definition

8

 

 

each catalyzed by a specific enzyme
Term

 

The acetyl group of acetyl CoA
Definition

 

joins the cycle by combining with oxaloacetate, forming citrate
Term

 

The next seven steps
Definition

 

decompose the citrate back to oxaloacetate, making the process a cycle
Term

 

The NADH and FADH2 produced by the cycle
Definition

 

relay electrons extracted from food to the electron transport chain
Term

 

Following glycolysis and the citric acid cycle, NADH and FADH2 
Definition

 

account for most of the energy extracted from food
Term

 

NADH and FADH2 
Definition

 

electron carriers donate electrons to the electron transport chain, which powers ATP synthesis via oxidative phosphorylation
Term

 

The electron transport chain is in the
Definition

 

cristae of the mitochondrion
Term

 

The Pathway of Electron Transport
Definition
....
Term

 Most of the chain’s components are

Definition
proteins, which exist in multiprotein complexes
Term

 

The carriers
Definition

 

alternate reduced and oxidized states as they accept and donate electrons
Term

 

Electrons drop in
Definition

 

free energy as they go down the chain and are finally passed to O2, forming H2O
Term

 

Electrons are transferred from
Definition

 

NADH or FADH2 to the electron transport chain
Term

 

Electrons are passed through a number of
Definition

 

proteins including cytochromes (each with an iron atom) to O2
Term

 

The electron transport chain generates
Definition

 

no ATP
Term

 

electron transport chain 
function is to
Definition

 

break the large free-energy drop from food to O2 into smaller steps that release energy in manageable amounts
Term

 

Chemiosmosis: The Energy-Coupling Mechanism
Definition
this serves as a divider so u (i)  dont get comfused
Term
Electron transfer in the electron transport chain causes
Definition

 

proteins to pump H+ from the mitochondrial matrix to the intermembrane space
Term

 

H+ then moves
Definition

 

back across the membrane, passing through channels in ATP synthase
Term

 

ATP synthase uses the
Definition

 

ex:of 
chemiosmosis
exergonic flow of H+ to drive phosphorylation of ATP
Term

 

chemiosmosis
Definition

 

the use of energy in a H+ gradient to drive cellular work
Term

 

The energy stored in a H+ gradient across a membrane
Definition

 

couples the redox reactions of the electron transport chain to ATP synthesis
Term

 

The H+ gradient is referred to as a
Definition

 

proton-motive force, emphasizing its capacity to do work
Term

 

An Accounting of ATP Production by Cellular Respiration
Definition
divider ....
Term

 

During cellular respiration, most energy flows in this sequence:
Definition

 

glucose ® NADH  ® electron transport chain ® proton-motive force ® ATP
Term

 

About 40% of the energy in a glucose molecule is
Definition

 

transferred to ATP during cellular respiration, making about 38 ATP
Term

 

Fermentation and anaerobic respiration enable
Definition
cells
to produce ATP without the use of oxygen
Term

 

Most cellular respiration requires ___ 
to produce ATP
Definition

 

O2
Term

 

Glycolysis can produce ATP with or without
Definition

 

(in aerobic or anaerobic conditions)
O2 
Term

 

In the absence of O2, glycolysis
Definition

 

couples with fermentation or anaerobic respiration to produce ATP
Term

 

Anaerobic respiration uses .... and ex:
Definition

 

an electron transport chain with an electron acceptor other than O2, for example sulfate 
Term

 

Fermentation uses _______ instead of
Definition

 

phosphorylation
 an electron transport chain to generate ATP
Term

 

Types of Fermentation
Definition
divider ...
Term

 

Fermentation consists of
Definition

 

glycolysis + reactions that regenerate NAD+, which can be reused by glycolysis
Term

 

Two common types of fermentation are:
Definition

 

alcohol fermentation & lactic acid fermentation
Term

 

In alcohol fermentation,
Definition

 

pyruvate is converted to ethanol in two steps, with the first releasing CO2
Term

Ex of 

alcohol fermentation
Definition

 

yeast is used in brewing, winemaking, and baking
Term

 

In lactic acid fermentation
Definition

 

pyruvate is reduced to NADH, forming lactate as an end product, with no release of CO2
Term

2 exs of 

Lactic acid fermentation
Definition

 

by some fungi and bacteria is used to make cheese and yogurt
 
Human muscle cells use lactic acid fermentation to generate ATP when O2 is scarce
Term

 

Fermentation and Aerobic Respiration Compared
Definition

divider

 

Term

Both 

Fermentation and Aerobic Respiration  use
Definition

 

glycolysis to oxidize glucose and other organic fuels to pyruvate
Term

 

Fermentation and Aerobic Respiration 
have different final electron acceptors
Definition

 

an organic molecule (such as pyruvate or acetaldehyde) in fermentation and O2 in cellular respiration
Term

 

Cellular respiration produces ___ ATP per glucose molecule 
Definition

 

38
Term

 

fermentation produces __ATP per glucose molecule  
Definition

 

2
Term

 

Obligate anaerobes
Definition

 

carry out fermentation or anaerobic respiration and cannot survive in the presence of O2
Term

 

facultative anaerobes and exs:
Definition

 

Yeast and many bacteria 
 
meaning that they can survive using either fermentation or cellular respiration
Term

 

In a facultative anaerobe, pyruvate
Definition

 

is a fork in the metabolic road that leads to two alternative catabolic routes
Term

 

Photosynthesis
Definition

 

 
Directly / indirectly 
nourishes almost the entire living world
 
is the process that converts solar energy into chemical energy
Term

 

Autotrophs
Definition

 

are the producers of the biosphere
Term

 

Autotrophs sustain themselves
Definition

 

without eating anything derived from other organisms
Term

 

Autotrophs produce
Definition

 

organic molecules from CO2 and other inorganic molecules
Term

 

Almost all plants are
Definition

 

photoautotrophs, using the energy of sunlight to make organic molecules from H2O and CO2
Term

 

Photosynthesis occurs in
Definition

 

 
These organisms feed not only themselves but also most of the living world
plants, algae, certain other protists, and some prokaryotes
Term

 

Heterotrophs
Definition

 

they obtain their organic material from other organisms 
are the consumers of the biosphere
Term

 

all heterotrophs, including humans, depend on
Definition

 

photoautotrophs for food and O2
Term

 

Chloroplasts: The Sites of Photosynthesis in Plants
Definition
divider.....
Term

 

the major locations of photosynthesis  are
Definition

the 

Leaves
Term

 

chlorophyll
Definition

 

the green pigment within chloroplasts
Term
Light energy absorbed by chlorophyll drives
Definition
the synthesis of organic molecules in the chloroplast
Term

 

stomata
Definition

 

microscopic pores
Term

 

__  enters and __  exits the leaf
Definition

 

CO2 
 
O2 
Term

 

Chloroplasts are found mainly in cells of the
Definition

 

mesophyll
Term

 

mesophyll
Definition

is 

the interior tissue of the leaf
Term

 

A typical mesophyll cell has  _______ 
chloroplasts
Definition

 

30–40
Term

 

The chlorophyll is in the membranes of
Definition

 

thylakoids
Term

 

thylakoids
Definition

 

connected sacs in the chloroplast
Term

 

 
thylakoids may be stacked in columns called
Definition
grana
Term

 

Chloroplasts also contain
Definition

 

stroma
Term

 

stroma
Definition

 

a dense fluid
Term

 

 
Tracking Atoms Through Photosynthesis: Scientific Inquiry Tracking Atoms Through Photosynthesis: Scientific Inquiry
Definition
divider
Term

 

Photosynthesis can be summarized as the following equation:
Definition

 

6 CO2 + 12 H2O + Light energy ® C6H12O6 + 6 O2 + 6 H2O
Term

 

The Splitting of Water
Definition
divder
Term

 

Chloroplasts split
Definition

 

H2O into hydrogen and oxygen, incorporating the electrons of hydrogen into sugar molecules
Term

 

Photosynthesis as a Redox Process
Definition

divider

 

Term

 

Photosynthesis is a ____ process in which
Definition
H2O is oxidized and CO2 is reduced
Term

 

The Two Stages of Photosynthesis
Definition

divider

 

Term

 

Photosynthesis consists of the
Definition

 

light reactions (the photo part) and Calvin cycle (the synthesis part)
Term

 

The light reactions :
Definition

 

in the thylakoids
Split H2O
Release O2
Reduce NADP+ to NADPH
Generate ATP from ADP by photophosphorylation
Term

 

The Calvin cycle
Definition

 

 forms sugar from CO2, using ATP and NADPH
in the stroma
Term

 

The Calvin cycle begins with
Definition

 

carbon fixation, incorporating CO2 into organic molecules
Term

 

The light reactions convert solar energy to the chemical energy of ATP and NADPH
Definition

divider

 

Term

the

Chloroplasts's 
thylakoids
Definition

 

transform light energy into the chemical energy of ATP and NADPH
Term

 

The Nature of Sunlight
Definition

divider

 

Term

 

Light
Definition

 

 is a form of electromagnetic energy, also called electromagnetic radiation
 
travels in rhythmic waves
Term

 

Wavelength
Definition

 

is the distance between crests of waves
Term

 

Wavelength determines
Definition

 

the type of electromagnetic energy
Term

 

The electromagnetic spectrum
Definition

 

is the entire range of electromagnetic energy, or radiation
Term

 

Visible light
Definition

 

consists of wavelengths (including those that drive photosynthesis) that produce colors we can see
Term

 

Light also behaves as though it consists of discrete particles, called
Definition

 

photons
Term

 

Photosynthetic Pigments: The Light Receptors
Definition
divider...
Term

 

Pigments are substances that
Definition

 

absorb visible light
Term

 

Different pigments
Definition

 

absorb different wavelengths
Term

 

Wavelengths that are not absorbed
Definition

 

are reflected or transmitted
Term

 

Leaves appear green because
Definition

 

chlorophyll reflects and transmits green light
Term

 

Excitation of Chlorophyll by Light
Definition
divider ....
Term

 

When a pigment absorbs light
Definition

 

it goes from a ground state to an excited state, which is unstable
Term

 

When excited electrons fall back to the ground state
Definition

 

photons are given off, an afterglow called fluorescence
Term

 

If illuminated, an isolated solution of chlorophyll
Definition

 

will fluoresce, giving off light and heat
Term

 

A photosystem consists of a
Definition

 

reaction-center complex 
surrounded by light-harvesting complexes
Term

 

a reaction-center complex is:  
Definition
a type of protein complex
Term

 

light-harvesting complexes are... and...
Definition

 

pigment molecules bound to proteins
 
funnel the energy of photons to the reaction center
Term

 

A primary electron acceptor in the reaction center
Definition

 

accepts an excited electron from chlorophyll a
Term

 

the first step of the light reactions
Definition

 

Solar-powered transfer of an electron from a chlorophyll a molecule to the primary electron acceptor
Term

 

There are two types of photosystems in the thylakoid membrane
Definition

 

Photosystem II (PS II)
 
Photosystem I (PS I)
Term

 

Photosystem II (PS II)
Definition

 

functions first
 
and is best at absorbing a wavelength of 680 nm
Term

 

Photosystem I (PS I)
Definition

 

is best at absorbing a wavelength of 700 nm
Term

 

The reaction-center chlorophyll a of PS II is called
Definition

 

P680
Term

 

The reaction-center chlorophyll a of PS I is called
Definition

 

P700
Term

 

Linear Electron Flow
Definition

divider

 

Term

 

During the light reactions, there are two possible routes for electron flow
Definition

 

cyclic and linear
Term

 

Linear electron flow is the:
Definition

 

primary pathway
Term

 

Linear electron flow involves:
Definition

 

both photosystems
Term

 

Linear electron flow produces:
Definition
ATP and NADPH using light energy
Term

 

Linear electron flow goes as follows?
Definition

 

         A photon hits a pigment and its energy is passed among pigment molecules until it excites P680

         An excited electron from P680 is transferred to the primary electron acceptor

         P680+ (P680 that is missing an electron) is a very strong oxidizing agent

         H2O is split by enzymes, and the electrons are transferred from the hydrogen atoms to P680+, thus reducing it to P680

         O2 is released as a by-product of this reaction

         Each electron “falls” down an electron transport chain from the primary electron acceptor of PS II to PS I

         Energy released by the fall drives the creation of a proton gradient across the thylakoid membrane

         Diffusion of H+ (protons) across the membrane drives ATP synthesis

         In PS I (like PS II), transferred light energy excites P700, which loses an electron to an electron acceptor

         P700+ (P700 that is missing an electron) accepts an electron passed down from PS II via the electron transport chain

         Each electron “falls” down an electron transport chain from the primary electron acceptor of PS I to the protein ferredoxin (Fd)

         The electrons are then transferred to NADP+ and reduce it to NADPH

         The electrons of NADPH are available for the reactions of the Calvin cycle

Term

 

Cyclic Electron Flow
Definition

divider

 

Term

 

Cyclic electron flow uses
Definition

 

only photosystem I 
Term

Cyclic electron flow 

produces
Definition

ATP  but not 

NADPH

Term

 

Cyclic electron flow generates
Definition

 

surplus ATP, satisfying the higher demand in the Calvin cycle
Term

 

Cyclic electron flow may
Definition

 

protect cells from light-induced damage
Term

 

A Comparison of Chemiosmosis in Chloroplasts and Mitochondria
Definition

divider

 

Term

 

both Chloroplasts and mitochondria generate
Definition

 

ATP by chemiosmosis, BUT use different sources of energy
Term

 

Mitochondria transfer
Definition

 

chemical energy from food to ATP
Term

 

chloroplasts transform
Definition

 

light energy into the chemical energy of ATP
Term

 

In mitochondria, protons are
Definition

 

pumped to the intermembrane space and drive ATP synthesis as they diffuse back into the mitochondrial matrix
Term

 

In chloroplasts, protons are
Definition

 

pumped into the thylakoid space and drive ATP synthesis as they diffuse back into the stroma
Term

 

light reactions generate
Definition

 

ATP and increase the potential energy of electrons by moving them from H2O to NADPH
Term

 

The Calvin cycle uses ATP and NADPH to convert CO2 to sugar
Definition
divider...
Term

 

The Calvin cycle, like the citric acid cycle
Definition

 

regenerates its starting material after molecules enter and leave the cycle
Term

 

The Calvin cycle
builds sugar from .... and ...
Definition

 

smaller molecules by using ATP.... the reducing power of electrons carried by NADPH
Term

 

Alternative mechanisms of carbon fixation have evolved in hot, arid climates
Definition

divider...

 

Term

 

photorespiration
Definition

 

On hot, dry days, plants close stomata, which conserves H2O but also limits photosynthesis
The closing of stomata reduces access to CO2 and causes O2  to build up
Term

 

Photorespiration: An Evolutionary Relic?
Definition

divider...

 

Term

 

In most plants (C3 plants), initial fixation of CO2, via rubisco
Definition

 

forms a three-carbon compound
Term

 

In photorespiration
Definition

 

rubisco adds O2 instead of CO2 in the Calvin cycle
Term

 

Photorespiration consumes
Definition

 

O2 and organic fuel and releases CO2 without producing ATP or sugar
Term

 

Photorespiration limits
Definition

 

damaging products of light reactions that build up in the absence of the Calvin cycle
Term

 

photorespiration is a problem because on a hot, dry day it can
Definition

 

drain as much as 50% of the carbon fixed by the Calvin cycle
Term

 

C4 Plants
Definition
divider...
Term

 

C4 plants minimize
Definition

 

 
This step requires the enzyme PEP carboxylase
the cost of photorespiration by incorporating CO2 into four-carbon compounds in mesophyll cells
Term

 

PEP carboxylase has ....it...
Definition

 

a higher affinity for CO2 than rubisco does.....
it can fix CO2 even when CO2 concentrations are low
Term

 

These four-carbon compounds are exported to
Definition

 

bundle-sheath cells, where they release CO2 that is then used in the Calvin cycle
Term

 

CAM Plants
Definition
divider
Term

 

Some plants, including succulents, use  ____ to fix carbon
Definition

 

crassulacean acid metabolism (CAM)
Term

 

CAM plants
Definition

 

open their stomata at night, incorporating CO2 into organic acids
Term

 

Stomata close during the day, and
Definition

 

CO2 is released from organic acids and used in the Calvin cycle
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