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Protein Synthesis: The Genetic Code
Key Terms
21
Biology
Undergraduate 2
06/15/2010

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Term
acceptor stem
Definition
site of amino acid attachment to tRNA, formed by base pairing btw nts at 5' and 3' end of tRNA, most stabilized by 7 bps, 3'-CCA_OH not base paired
Term
aminoacyl-tRNA
Definition
key component of protein synthetic machinery that carries amino acids activated to aminoacyl-AMP to bind to cognate tRNA (charged tRNA)
Term
aminoacyl-tRNA synthetase
Definition
tRNA specific, catalyzes adenylyl (AMP) group transfer from ATP to amino acid's alpha-carboxyl group and aminoacyl group transfer from aminoacyl-adenylate to tRNA
Term
amino terminus (N-terminus)
Definition
terminal of protein that binds to growing peptide during translation, beginning of protein synthesis
Term
anticodon
Definition
trinucleotide that base pairs with the codon in mRNA in an antiparallel fashion
Term
anticodon arm
Definition
arm of tRNA that is a stem loop structure that exposes anticodon triplet at one end and varies in size from one tRNA molecule to another, across from acceptor arm
Term
carboxyl terminus (C-terminus)
Definition
adenylyl group is transferred from ATP to this terminus, end of protein synthesis
Term
cell free translation system
Definition
in vitro translation system
Term
clover leaf secondary structure
Definition
D arm, anticodon arm, acceptor stem, C arm
Term
codon
Definition
particular sequence of three adjacent nucleotides that code for a specific amino acid
Term
endoplasmic reticulum (ER)
Definition
organelle that is a continuous intracellular tubular membrane network involved in the synthesis of lipds, membrane proteins, and secretory proteins
Term
frameshift mutation
Definition
mutation caused by a deletion or insertion that is not a multiple of three base pairs, thus changes the frame in which triplets are translated into protein
Term
genetic code
Definition
nonoverlapping, commaless, almost universal, highly degenerate, unambiguous, confirmed by synthetic messengers with strictly defined base sequences
Term
ribosome
Definition
large ribonucleoprotein complex consisting of two subunits that functions as a protein synthetic factory to make specific polypeptides as directed by mRNA
Term
rough ER
Definition
regions of the ER studded with ribosomes, which appear rough or grainy in electron micrographs
Term
smooth ER
Definition
regions of ER that lack ribosomes that have a smooth appearance
Term
start codon
Definition
AUG => methionine
Term
stop codon
Definition
nucleotide triplet within mRNA that signals termination of translation, brings release factor
Term
transfer RNA (tRNA)
Definition
small RNA molecule that carries a specific amino acid building block to the ribosome for incorporation into the growing polypeptide chain. A three nucleotide sequence in tRNA (the anticodon) pairs with a three nucleotide sequence in the mRNA (the codon) that is bound to the ribosome
Term
wobble
Definition
amount of play in base pairing between first base of anticodon and third base of codon that permits nonstandard base pairing
Term
wobble hypothesis
Definition
hypothesis that accounts for the ability of a tRNA to recognize more than one codon by unusual pairing with the third base of a codon, codon and anticodon form antiparallel base pairs, first two bases form standard Watson-Crick base pairs with last two bases in anticodon, wobble
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