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Nucleic Acids
IB Unit 4
274
Biology
12th Grade
04/08/2009

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Term

 

The Molecular Basis of Inheritance
Definition

divider

 

Term

 

transformation
Definition

 

a change in genotype and phenotype due to assimilation of foreign DNA
Term

 

Frederick Griffith
Definition

         Griffith worked with two strains of a bacterium, one pathogenic and one harmless

         When he mixed heat-killed remains of the pathogenic strain with living cells of the harmless strain, some living cells became pathogenic

Term
The discovery of the genetic role of DNA began with research by  ________ in _________
Definition

        Frederick Griffith

 1928

Term

 

It was known that DNA is a
Definition

 

polymer of nucleotides, each consisting of a nitrogenous base, a sugar, and a phosphate group
Term

 

Chargaff’s rules state that
Definition

 

in any species there is an equal number of A and T bases, and an equal number of G and C bases
Term

 

The Watson-Crick model explains Chargaff’s rules: 
The Watson-Crick model explains Chargaff’s rules:
Definition

 

in any organism the amount of A = T, and the amount of G = C
Term

 

Since the two strands of DNA are complementary, each strand
Definition

 

acts as a template for building a new strand in replication
Term

 

In DNA replication, the parent molecule
Definition

 

unwinds, and two new daughter strands are built based on base-pairing rules
Term

 

Watson and Crick’s semiconservative model  of replication
Definition

 

predicts that when a double helix replicates, each daughter molecule will have one old strand (derived or “conserved” from the parent molecule) and one newly made strand
Term

 

the conservative model
Definition
the two parent strands rejoin
Term

 

dispersive model
Definition
each strand is a mix of old and new
Term

 

origins of replication
Definition

 

 
where the two DNA strands are separated, opening up a replication “bubble”
 
Term

 

Replication proceeds
Definition

 

in both directions from each origin, until the entire molecule is copied
Term

 

 
At the end of each replication bubble is a
Definition

replication fork

Term
replication fork
Definition

 

a Y-shaped region where new DNA strands are elongating
Term

 

Replication begins at special sites called
Definition

 

origins of replication
Term

 

What are Helicases?
Definition

 

are enzymes that untwist the double helix at the replication forks
Term

 

 What does Single-strand binding protein do? 
Definition

 

binds to and stabilizes single-stranded DNA until it can be used as a template
Term

what does 

Topoisomerase do?
Definition

 

corrects “overwinding” ahead of replication forks by breaking, swiveling, and rejoining DNA strands
Term

 

DNA polymerases cannot .....they can ....
Definition
initiate synthesis of a polynucleotide.....  only add nucleotides to the 3¢ end
Term

 

The initial nucleotide strand is a short RNA
Definition

 

primer
Term

 

primase
Definition

 

An enzyme

can start an RNA chain from scratch & adds RNA nucleotides one at a time using the parental DNA as a template

Term

 

The primer is
Definition

 

short 5–10 nucleotides long
Term

 

the 3¢ end
Definition

 

serves as the starting point for the new DNA strand
Term

 

DNA polymerases
Definition

an enzyme

 

 

catalyze the elongation of new DNA at a replication fork
Term

 

Most DNA polymerases require
Definition

 

primer and a DNA template strand
Term

 

DNA polymerases add nucleotides only to the free ___ end of a growing strand
Definition
 3¢
Term

 

the new DNA strand can elongate only in the ___ to ___ direction
Definition
5¢  to  3¢ 
Term

 

Along one template strand of DNA, the DNA polymerase synthesizes a ______ _____  continuously, moving toward the replication fork
Definition
leading strand
Term

 

To elongate the other new strand, called the_____ _____  , DNA polymerase must work in the direction away from the replication fork
Definition
lagging strand
Term

 

The lagging strand is synthesized as a series of segments called
Definition
Okazaki fragments
Term

 

Okazaki fragments, are joined together by?
Definition
DNA ligase
Term

1 job of 

DNA polymerases  is to?
Definition

 

proofread newly made DNA, replacing any incorrect nucleotides
Term

 

In mismatch repair of DNA
Definition

 

repair enzymes correct errors in base pairing
Term

 

In nucleotide excision repair
Definition

 

a nuclease cuts out and replaces damaged stretches of DNA
Term

 

Eukaryotic chromosomal DNA molecules have at their ends nucleotide sequences called 
Definition
telomeres
Term

 

Telomeres do not ....... but they do ......
Definition
prevent the shortening of DNA molecules ..... postpone the erosion of genes near the ends of DNA molecules
Term

 

telomerase
Definition

 

catalyzes the lengthening of telomeres in germ cells
Term

 

From Gene to Protein
Definition
divider...
Term

 

Proteins are the links between
Definition

 

genotype and phenotype
Term

 

Gene expression is  the
Definition

process by which 

DNA directs protein synthesis

Term

 

Gene expression includes two stages:
Definition
transcription and translation
Term

 

one gene–one enzyme hypothesis was developed by
Definition

 

George Beadle and Edward Tatum
Term
one gene–one enzyme hypothesis states that
Definition

 

each gene dictates production of a specific enzyme
Term

 

one gene–one enzyme hypothesis was later changed to?
Definition

 

one gene–one polypeptide hypothesis
Term

 

RNA is the intermediate between
Definition

 

genes and the proteins for which they code
Term

 

Transcription
Definition

 

is the synthesis of RNA under the direction of DNA
Term

 

Transcription produces
Definition

 

messenger RNA (mRNA)
Term

 

Translation
Definition

 

is the synthesis of a polypeptide, which occurs under the direction of mRNA
Term

 

Ribosomes
Definition

 

are the sites of translation
Term

 

In prokaryotes, mRNA produced by transcription is
Definition

 

immediately translated without more processing
Term

in a 

eukaryotic cell, the nuclear envelope separates
Definition

 

transcription from translation
Term

 

Eukaryotic RNA transcripts are modified through ....to.. 
Definition
RNA processing to yield finished mRNA
Term

 

A primary transcript
Definition

 

is the initial RNA transcript from any gene
Term

 

The central dogma is the concept that cells are governed by a cellular chain of command:
                     
Definition
DNA ® RNA ® protein
Term

 

There are___ amino acids, but there are only __ nucleotide bases in DNA
Definition

20

 

4

Term

 

The flow of information from gene to protein is based on a
Definition
triplet code
Term
triplet code
Definition
is a series of non overlapping, three-nucleotide words
Term

the 

triplet code is the 
______units of uniform length that can code for ....
Definition

 

smallest ....
 all the amino acids
Term

 

During transcription
Definition
one of the two DNA strands called the template strand provides a template for ordering the sequence of nucleotides in an RNA transcript
Term

 

During translation, the mRNA base triplets called____ are read in the ___ to ___   direction
Definition

codons

5¢ to 3¢

Term

 

Each codon
Definition

 

specifies the amino acid to be placed at the corresponding position along a polypeptide
Term

 

Codons along an mRNA molecule are read by
Definition

 

translation machinery in the 5¢ to 3¢ direction
Term

 

no codon specifies
Definition
more than one amino acid
Term

 

Codons must be read in the correct ____ _____  in order for the specified polypeptide to be produced
Definition
reading frame (correct groupings)
Term

 

Of the 64 triplets, 61 code for.... ; 3 triplets are .....
Definition

amino acids

 

“stop” signals to end translation

Term

 

Genes can be transcribed and translated after
Definition

 

being transplanted from one species to another
Term

 

Transcription, is the ____ stage of gene expression
Definition
 first
Term

 

RNA synthesis is catalyzed by
Definition
RNA polymerase
Term
 What does RNA polymerase do? 
Definition
it pries the DNA strands apart and hooks together the RNA nucleotides
Term

 

RNA synthesis follows the same base-pairing rules as DNA, except
Definition

 

uracil which substitutes for thymine
Term

 

The DNA sequence where RNA polymerase attaches is called the
Definition
promoter
Term
 in bacteria, the sequence signaling the end of transcription is called the
Definition
terminator
Term

 

The stretch of DNA that is transcribed is called a
Definition

 

transcription unit
Term

 

The three stages of transcription:
Definition

 

Initiation
Elongation
Termination
Term

 

 What do Promoters do? 
Definition
they signal the initiation of RNA synthesis
Term

 

What do Transcription factors do?
Definition

 

mediate the binding of RNA polymerase and the initiation of transcription
Term

 

The completed assembly of transcription factors and RNA polymerase II bound to a promoter is called a
Definition
transcription initiation complex
Term

 

A promoter called a _____ _____ is crucial in forming the initiation complex in eukaryotes
Definition
TATA box
Term

 

The mechanisms of termination in 
 bacteria is that
Definition

 

the polymerase stops transcription at the end of the terminator
Term
The mechanisms of termination in eukaryotes
Definition
the polymerase continues transcription after the pre-mRNA is cleaved from the growing RNA chain; the polymerase eventually falls off the DNA
Term

 

Enzymes in the eukaryotic nucleus modify.....before.....
Definition

pre-mRNA......the genetic messages are dispatched to the cytoplasm

 

 

Term

 

 
During RNA processing in 
eukaryotes
Definition

 

both ends of the primary transcript are usually altered
Term

 

The 5¢ end receives a modified nucleotide
Definition

 

5¢ cap
Term

 

The 3¢ end gets a
Definition
poly-A tail
Term

 

These modifications share several functions:
Definition

 

They seem to facilitate the export of mRNA
They protect mRNA from hydrolytic enzymes
They help ribosomes attach to the 5¢ end
Term

 

noncoding regions are called
Definition

intervening sequences

 

OR

 

introns

 

Term

 

The other regions are called ....because.... usually translated into .....
Definition
exons .....they are eventually expressed.....amino acid sequences
Term
 What does RNA splicing do?
Definition

 

it removes introns and joins exons, creating an mRNA molecule with a continuous coding sequence
Term
Spliceosomes consist of
Definition

 

a variety of proteins and several small nuclear ribonucleoproteins (snRNPs) that recognize the splice sites
Term
What are Ribozymes?
Definition

 

they are catalytic RNA molecules that function as enzymes and can splice RNA
Term

 

Three properties of RNA enable it to function as an enzyme
Definition

 

It can form a three-dimensional structure because of its ability to base pair with itself
Some bases in RNA contain functional groups
RNA may hydrogen-bond with other nucleic acid molecules
Term

 

Because of alternative splicing
Definition

 

the number of different proteins an organism can produce is much greater than its number of genes
Term

 

Some genes can encode more than one kind of polypeptide, depending on which segments are treated as exons during RNA splicing
Such variations are called?
Definition
alternative RNA splicing
Term

 

Proteins often have a modular architecture consisting of discrete regions called
Definition
domains
Term

 

different exons code for
Definition

 

the different domains in a protein
Term

 

Exon shuffling may result in the
Definition
evolution of new proteins
Term

 

A cell translates an mRNA message into protein with the help of
Definition
transfer RNA (tRNA)
Term

 

Molecules of tRNA are not identical:
Definition

Each carries a specific amino acid on one end

Each has an anticodon on the other end
Term
 the anticodon base-pairs with a
Definition
complementary codon on mRNA
Term

 

Flattened into one plane to reveal its base pairing, a tRNA molecule looks like a
Definition
cloverleaf
Term

 

Because of ___ ____  tRNA actually twists and folds into a three-dimensional molecule
Definition
hydrogen bonds
Term
tRNA is roughly
Definition
L-shaped
Term

 

Accurate translation requires
Definition

 

2 steps
Term

 

the 1st step in Accurate translation is?
Definition

 

a correct match between a tRNA and an amino acid, done by the enzyme aminoacyl-tRNA synthetase
Term
aminoacyl-tRNA synthetase is invloved in
Definition

 

the 1st step of Accurate translation
Term

 

2nd step in Accurate translation is
Definition

 

a correct match between the tRNA anticodon and an mRNA codon
Term

 

Flexible pairing at the third base of a codon is called
Definition
wobble
Term
wobble allows?
Definition
some tRNAs to bind to more than one codon
Term

 

Ribosomes facilitate specific coupling of.....with....in....
Definition
tRNA anticodons...mRNA codons....protein synthesis
Term

 

The two ribosomal subunits (large and small) are made of ____and ____  
Definition
 proteins and ribosomal RNA (rRNA)
Term

 

A ribosome has ___ binding sites for tRNA which are?
Definition

3

 

The P site  

The A site  
The E site
Term

 

The P site holds the
Definition

 

tRNA that carries the growing polypeptide chain
Term

 

The A site holds the
Definition
tRNA that carries the next amino acid to be added to the chain
Term

 

The E site is the
Definition
exit site, where discharged tRNAs leave the ribosome
Term

 

The initiation stage of translation brings together ____, a ___ with the ___ and ____
Definition

 mRNA

tRNA

first amino acid

the two ribosomal subunits

Term

 

The 1st step of the initiation stage is that
Definition
  a small ribosomal subunit binds with mRNA and a special initiator tRNA
Term
Then after the 1st  step of the initiation stage is that
Definition

 

the small subunit moves along the mRNA until it reaches the start codon (AUG)
Term

 

The Last step in the  initiation stage is that  
Definition

 

Proteins called initiation factors bring in the large subunit that completes the translation initiation complex
Term
initiation factors bring in the
Definition
large subunit that completes the translation initiation complex
Term

 

During the elongation stage, amino acids are
Definition

 

added one by one to the preceding amino acid
Term

 

Each addition in the 
elongation
stage/process  involves proteins called.....
and occurs in .... steps
Definition
elongation factors ...three.....
Term

 

The elongation factors occurs in three steps whic are?
Definition
: codon recognition, peptide bond formation, and translocation
Term

 

Termination occurs when a
Definition
stop codon in the mRNA reaches the A site of the ribosome
Term

 

The A site accepts a protein called a
Definition
release factor
Term

 

The release factor causes the
Definition
addition of a water molecule instead of an amino acid
Term
The release factor reaction releases?
Definition

 

 the polypeptide, and the translation assembly then comes apart
Term

 

A number of ribosomes can translate a single mRNA simultaneously, forming a
Definition
polyribosome (or polysome)
Term

 

Polyribosomes enable a
Definition
cell to make many copies of a polypeptide very quickly
Term

 

Polypeptide chains are modified after
Definition
translation
Term

 

Completed proteins are targeted to
Definition
specific sites in the cell
Term

 

During and after synthesis
Definition
 a polypeptide chain spontaneously coils and folds into its three-dimensional shape
Term

 

Some polypeptides are .....others.....
Definition

 

activated by enzymes that cleave then ......
come together to form the subunits of a protein
Term

 

Two populations of ribosomes are evident in cells:
Definition
free ribsomes and bound ribosomes 
Term

 

free ribsomes are in the
Definition
 cytosol
Term
 bound ribosomes are attached to the
Definition
ER
Term

 

What do Free ribosomes do?
Definition

 

they mostly synthesize proteins that function in the cytosol
Term

 

Bound ribosomes make proteins of the.... and..... that are secreted from the cell
Definition
endomembrane system...proteins
Term

 

Ribosomes are .... and can...
Definition
identical....switch from free to bound
Term

 

Polypeptide synthesis always begins in the
Definition
cytosol
Term

 

Synthesis finishes in the .... unless
Definition
cytosol....the polypeptide signals the ribosome to attach to the ER
Term

 

Polypeptides destined for the ER or for secretion are marked by a 
Definition
signal peptide
Term

 

 What does A signal-recognition particle (SRP) do? 
Definition
binds to the signal peptide
Term

 

The SRP brings the..... and its.... to the....
Definition
signal peptide ...ribosome....ER
Term

 

Mutations are
Definition

 

changes in the genetic material of a cell or virus
Term

 

Point mutations are
Definition
chemical changes in just one base pair of a gene
Term

 

Point mutations within a gene can be divided into two general categories:
Definition

Base-pair substitutions

Base-pair insertions or deletions
Term

 

A base-pair substitution replaces
Definition

 

one nucleotide and its partner with another pair of nucleotides
Term

 

Silent mutations have .....b/c
Definition

 

no effect on the amino acid produced by a codon ....of redundancy in the genetic code
Term

 

Missense mutations
Definition
still code for an amino acid, but not necessarily the right amino acid
Term

 

Nonsense mutations
Definition

 

change an amino acid codon into a stop codon, nearly always leading to a nonfunctional protein
Term

 

Insertions and deletions are ....and have a.....
Definition

 

additions or losses of nucleotide pairs in a gene.....
disastrous effect on the resulting protein more often than substitutions do
Term

 

Insertion or deletion of nucleotides
Definition

 

may alter the reading frame, producing a frameshift mutation
Term

 

Spontaneous mutations can occur during DNA
Definition

 

replication, recombination, or repair
Term

 

Mutagens are
Definition

 

physical or chemical agents that can cause mutations
Term

 

gene can be defined as a
Definition
region of DNA that can be expressed to produce a final functional product, either a polypeptide or an RNA molecule
Term

 

Regulation of Gene Expression
Definition
divider...
Term

 

Prokaryotes and eukaryotes alter gene expression in response
Definition
to their changing environment
Term

 

In multicellular eukaryotes, gene expression regulates ..... and is responsible for .....
Definition
development....differences in cell types
Term

 

A cell can regulate the production of enzymes by ....OR by
Definition
feedback inhibition ....gene regulation
Term

 

Gene expression in bacteria is controlled by the
Definition
operon model
Term

 

A cluster of functionally related genes can be under coordinated control by a single on-off “switch” The regulatory “switch” is a segment of DNA called an.... usually positioned within the... 
Definition
operator....promoter
Term

 

An operon is
Definition

 

the entire stretch of DNA that includes the operator, the promoter, and the genes that they control
Term

 

The operon can be switched off by a
Definition
protein repressor
Term

 

The repressor prevents gene transcription by .... and...
Definition
 binding to the operator... blocking RNA polymerase
Term

 

The repressor is the product of a separate 
Definition
regulatory gene
Term

 

The repressor can be in an ... or ... form, depending on the...
Definition
active...inactive...presence of other molecules
Term

 

A corepressor is a
Definition

 

molecule that cooperates with a repressor protein to switch an operon off
Term

 

By default the ... is on and the genes for... are...
Definition
trp operon....tryptophan synthesis... transcribed
Term

 

When tryptophan is present
Definition

 

it binds to the trp repressor protein, which turns the operon off
Term

 

The repressor is active only
Definition

 

in the presence of its corepressor tryptophan
Term

 

the trp operon is turned off (repressed)
Definition
if tryptophan levels are high
Term

 

A repressible operon is one that is usually 
Definition
on
Term

 

binding of a repressor to the....  shuts off ....
Definition
operator....transcription
Term

 

Example of a  repressible operon
Definition

 

The trp operon
Term

 

An inducible operon is one that is usually
Definition
off
Term

 

a molecule called an .... inactivates the .... and turns on...
Definition
inducer...repressor...transcription
Term

 

Example of an inducible operon
Definition

 

The lac operon
Term

 

The lac operon contains
Definition
genes that code for enzymes used in the hydrolysis and metabolism of lactose
Term

 

By itself, the lac repressor is....  and switches the ...
Definition
active...lac operon off
Term

 

inducer
Definition
inactivates the repressor to turn the lac operon on
Term

 

Inducible enzymes usually function in... their synthesis is induced by a....
Definition
catabolic pathways....chemical signal
Term

 

Repressible enzymes usually function in ...... their synthesis is repressed by...
Definition
anabolic pathways....high levels of the end product
Term

 

Regulation of the trp and lac operons involves ....because
Definition
negative control of genes ....operons are switched off by the active form of the repressor
Term

 When glucose  is scarce

catabolite activator protein (CAP),
is activated by binding with
Definition
cyclic AMP
Term

 

Activated CAP attaches to the .... and increases the ...., thus accelerating ....
Definition
promoter of the lac operon...affinity of RNA polymerase....transcription
Term

 

CAP helps regulate other
Definition
operons that encode enzymes used in catabolic pathways
Term

 

Differences between cell types result from
Definition
differential gene expression
Term
differential gene expression
Definition

 

the expression of different genes by cells with the same genome
Term

 

Errors in gene expression can lead to
Definition
diseases including cancer
Term

 

Genes within highly packed ...... are usually not expressed
Definition
heterochromatin
Term

 

Chemical modifications to histones and DNA of chromatin influence both ..... and...
Definition
chromatin structure.....gene expression
Term

 

In histone acetylation
Definition

 

acetyl groups are attached to positively charged lysines in histone tails
Term

 

the process histone acetylation.....thereby
Definition

 

loosens chromatin structure....promoting the initiation of transcription
Term

 

The addition of ... can condense chromatin
Definition
methyl groups (methylation)
Term

 

the addition of ... next to a .... can loosen chromatin
Definition
phosphate groups (phosphorylation)....methylated amino acid....
Term

 

The histone code hypothesis proposes that
Definition
specific combinations of modifications help determine chromatin configuration and influence transcription
Term

 

DNA methylation, the addition of methyl groups to certain bases in DNA, is associated
Definition
with reduced transcription in some species
Term

 

DNA methylation can cause
Definition
long-term inactivation of genes in cellular differentiation
Term

 

In genomic imprinting
Definition
methylation regulates expression of either the maternal or paternal alleles of certain genes at the start of development
Term

 

The inheritance of traits transmitted by mechanisms not directly involving the nucleotide sequence is called
Definition
epigenetic inheritance
Term

 

Chromatin-modifying enzymes provide
Definition
initial control of gene expression by making a region of DNA either more or less able to bind the transcription machinery
Term

 

Associated with most eukaryotic genes are
Definition
control elements
Term
control elements
Definition

 

segments of noncoding DNA that help regulate transcription by binding certain proteins
Term

 

Control elements and the proteins they bind are critical to the precise
Definition
regulation of gene expression in different cell types
Term

 

To initiate transcription, eukaryotic RNA polymerase requires the assistance of proteins called  
Definition

 

transcription factors
Term

 

General transcription factors are essential for the
Definition
transcription of all protein-coding genes
Term

 

In eukaryotes, high levels of transcription of particular genes depend on
Definition
control elements interacting with specific transcription factors
Term

 

Proximal control elements are located
Definition
close to the promoter
Term

 

Distal control elements, groups of which are called
Definition
enhancers
Term
enhancers may be
Definition
far away from a gene or even located in an intron
Term

 

An activator is a protein that
Definition
binds to an enhancer and stimulates transcription of a gene
Term

 

Bound activators cause
Definition
mediator proteins to interact with proteins at the promoter
Term

 

Some transcription factors function as
Definition

 

repressors, inhibiting expression of a particular gene
Term

 

Some activators and repressors act indirectly by influencing
Definition
chromatin structure to promote or silence transcription
Term

 

Each of the coordinately controlled eukaryotic genes has a
Definition
promoter and control elements
Term

 

Copies of the activators recognize
Definition
specific control elements and promote simultaneous transcription of the genes
Term

 

eukaryotic genes 
can be scattered over different chromosomes, but
Definition
each has the same combination of control elements
Term

 

Regulatory mechanisms can operate at ....which allows
Definition
various stages after transcription ....a cell to fine-tune gene expression rapidly in response to environmental changes
Term

 

In alternative RNA splicing
Definition

 

different mRNA molecules are produced from the same primary transcript, depending on which RNA segments are treated as exons and which as introns
Term

 

The life span of mRNA molecules in the cytoplasm is a key to determining
Definition
protein synthesis
Term

 

The mRNA life span is determined in part by
Definition
sequences in the leader and trailer regions
Term

 

The initiation of translation of selected
mRNAs can be blocked by
Definition
regulatory proteins that bind to sequences or structures of the mRNA
Term

 

translation of all mRNAs
in a cell may be regulated
Definition
simultaneously
Term

 

After translation, various types of .....including ... and the addition of che....., are subject to control
Definition
protein processing....cleavage....chemical groups
Term

 

Proteasomes are
Definition
giant protein complexes that bind protein molecules and degrade them
Term

 

Noncoding RNAs regulate gene expression at two points:
Definition
mRNA translation and chromatin configuration
Term

 

MicroRNAs (miRNAs) are
Definition
small single-stranded RNA molecules that can bind to mRNA
Term

 

MicroRNAs (miRNAs
can
Definition
degrade mRNA or block its translation
Term

 

The phenomenon of inhibition of gene expression by RNA molecules is called
Definition
RNA interference (RNAi)
Term

 

RNAi is caused by 
Definition
small interfering RNAs (siRNAs)
Term

 

siRNAs and miRNAs are similar BUT  
Definition
form from different RNA precursors
Term

 

siRNAs play a role in ....and can.... 
Definition
heterochromatin formation...block large regions of the chromosome
Term

 

Small RNAs may also
Definition
block transcription of specific genes
Term

 

Cell types are organized successively into
Definition
tissues, organs, organ systems, and the whole organism
Term

 

The transformation from zygote to adult results from
Definition
cell division, cell differentiation, and morphogenesis
Term

 

Cell differentiation is 
Definition

the 

process by which cells become specialized in structure and function

Term

 

The physical processes that give an organism its shape constitute
Definition
 morphogenesis
Term

 

Differential gene expression results from
Definition
genes being regulated differently in each cell type
Term

 

An egg’s cytoplasm contains .... that are distributed unevenly in the unfertilized egg
Definition
RNA, proteins, and other substances
Term

 

Cytoplasmic determinants are
Definition
maternal substances in the egg that influence early development
Term

 

The other important source of developmental information is the....  especially signals from... nearby
Definition
environment around the cell... embryonic cells
Term

 

In the process called ..... signal molecules from embryonic cells cause transcriptional changes in nearby target cells
Definition
induction
Term

 

interactions between cells induce
Definition
differentiation of specialized cell types
Term

 

Determination commits
Definition

 

a cell to its final fate
Term

 

Determination precedes
Definition
differentiation
Term

 

Cell differentiation is marked by the
Definition
production of tissue-specific proteins
Term

 

Myoblasts produce
Definition
muscle-specific proteins and form skeletal muscle cells
Term

 

MyoD is one of several “master regulatory genes” that produce
Definition
proteins that commit the cell to becoming skeletal muscle
Term

 

The MyoD protein is a .... that
Definition
transcription factor...binds to enhancers of various target genes
Term

 

Pattern formation is
Definition

 

the development of a spatial organization of tissues and organs
Term

 

Positional information is
Definition

 

the molecular cues that control pattern formation
Term
Positional information tells a cell
Definition

 

its location relative to the body axes and to neighboring cells
Term

 

embryonic lethals are
Definition

 

embryos with lethal mutations
Term

 

Maternal effect genes encode for
Definition

 

cytoplasmic determinants that initially establish the axes of the body of Drosophila
Term

 

These maternal effect genes are also called
Definition
egg-polarity genes
Term

 

egg-polarity genes control
Definition
orientation of the egg and consequently the fly
Term

 

the bicoid gene
Definition

 

affects the front half of the body(the fruitfly?)
Term

 

gradients of substances called .....establish .....
Definition
morphogens ....an embryo’s axes and other features
Term

 

The bicoid research is important for three reasons:
Definition

 

-It identified a specific protein required for some early steps in pattern formation
It increased understanding of the mothers role in embryo development
It demonstrated a key developmental principle that a gradient of molecules can determine polarity and position in the embryo
Term

 

The gene regulation systems that go wrong during cancer are the very same systems involved in
Definition
embryonic development
Term

 

Cancer can be caused by
Definition
mutations to genes that regulate cell growth and division
Term

 

Tumor viruses can cause ....in
Definition
cancer.... animals including humans
Term

 

Oncogenes are
Definition

 

cancer-causing genes
Term

 

Proto-oncogenes are
Definition

 

the corresponding normal cellular genes that are responsible for normal cell growth and division
Term

 

Conversion of a proto-oncogene to an oncogene can lead to
Definition
abnormal stimulation of the cell cycle
Term

 

Proto-oncogenes can be converted to oncogenes by
Definition

 

-Movement of DNA within the genome: if it ends up near an active promoter, transcription may increase
-Amplification of a proto-oncogene: increases the number of copies of the gene
-Point mutations in the proto-oncogene or its control elements: causes an increase in gene expression
Term

 

Tumor-suppressor genes help
Definition

 

prevent uncontrolled cell growth
Term

 

Mutations that decrease protein products of tumor-suppressor genes may
Definition
contribute to cancer onset
Term

 

What doTumor-suppressor proteins do?
Definition

 

-Repair damaged DNA
- Control cell adhesion
-Inhibit the cell cycle in the cell-signaling pathway
Term

 

Multiple mutations are generally needed for
Definition
full-fledged cancer; thus the incidence increases with age
Term

 

At the DNA level, a cancerous cell is usually characterized by at least
Definition
one active oncogene and the mutation of several tumor-suppressor genes
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