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Archaea are a gruo pf phylogenically related prokaryotes distinct from Bacteria |
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Bacteria are a group of phylogenically related prokaryotes distinct from Archaea |
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Cladistics are phylogenetic methods that group organisms by their evolutionary relationships, not by their phenotypic similarities |
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What is DNA-DNA hybridization? |
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DNA-DNA hybridization is the experimental determination of genomic similarity by measuring the extent of hybridization of DNA from the genome of one organism with that of another |
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An ecotype is a population of genetically identical cells sharing a particular resource within an ecological niche |
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What is the exact definition of evolution? |
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Evolution is defined as descent with modification |
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What is the FAME test and what is it used to detect? |
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FAME stands for "fatty acid methyl ether" and is used in the determination of water contamination in several water treatment facility as it detects the presence of various biological contaminants |
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What is the FISH practice and what is it useful for? |
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The FISH practice stands for fluorescent in-situ hybridization which is useful both in the environment and in culture |
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What is the definition of fitness? |
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Fitness is the capacity of an organims to survive and reproduce as compared to competing organisms |
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What is the definition of monophyletic? |
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Definition
To be monophyletic, you must be within a group derived from the same ancestor |
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What is multilocus sequence typing (MLST)? |
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Definition
MLST is a taxonomic tool for classifying organisms on the basis of gene sequence variations in several housekeeping genes |
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Wha is a phylogenetic probe? |
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Definition
A phylogenetic probe is an oligonucleotide, somestimes made fluorescent by attachment of a dye, complementary in sequence to some ribosomnal RNA signature sequence |
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Proteobacteria are a large group of phylogenetically related Gram - bacteria |
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What is the ribosomal database project (RDP)? |
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The ribosomal database project is a large database of small subunit ribosomal RNA sequences that can be retrieved electronically and used in comparative ribosomal RNA sequence studies |
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Ribotyping is a means of identifying microorganisms from analysis of DNA fragments generated from restriction enzyme digestion of genes encoding their 16S rRNA |
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What is a signature sequence? |
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Definition
A signature sequence is short oligonucleotides of defined sequence in SSU ribosomal RNA characteristic of specific organisms or a group of phylogenetically related organisms |
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What is 16S ribosomal RNA? |
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Definition
16S ribosomal RNA is a large polynucleotide (about 1,500 bases) that functions are part of the small subunit of the ribosome of bacteria and archaea and from whose gene sequence evolutionary information can be obtained. The eukaryotic counterpart to 16S is 18S |
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A stromatolite is a laminated mocrobial mat, typically built from layers of filamentous bacteria and other microorganisms which can become fossilized |
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