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NEU Genetics Fall 2010 Lec 24
These flashcards cover most slide and lecture material from lecture 24 of Vollmer's Fall 2010 section
28
Microbiology
Undergraduate 1
11/30/2010

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Term
What are the two key events involved in the cell cycle?
Definition

Replicate chromosomal DNA once and put identical replicas of each chromosome into two daughter cells

Term
What are some major things to note in general about the cell cycle?
Definition

The cell cycle is under genetic control, the cell cycle can't be reversed, many genes are transcribed during the cell cycle right before their products are needed and mutations affecting the cell cycle have helped to identify the key regulatory pathways (and cancers)

Term
What are some important things to note about the buds that come off of parent yeast cells during cell replication?
Definition

The bud first emerges shortly after DNA synthesis begins. At the onset of mitosis, the bud is almost as large as the mother cell. After separation and completiong of mitosis the bud cell must grow to reach a certain size before it can start its own mitosis cycle

Term
What is the cell cycle regulated by?
Definition
The cell cycle is regulated by cyclins and cyclin-dependent protein kinases (CDKs)
Term
What do cyclin-CDK complexes do in regards to target proteins?
Definition
They change their activity level (positively or negatively)
Term
What is a mitogen?
Definition

A mitogen is a chemical or some sort of treatment that stimulates the mitotic cell cycle

Term
What are four key things to remember about cyclin dependent kinases (CDKs)?
Definition

They're only active when bound to a cyclin, specific CDK-cyclin complexes trigger progression through each stage of the cell cycle, kinases add a phosphate to the target protein and adding or taking away a phosphate changes the shape (and therefore the function) of a protein

Term
What two cyclins are typically present during the G1 stage of the cell cycle?
Definition

D-CDK4 and D-CDK6

Term
What cyclin is normally found primarily towards the end of the G1 cycle heading into the S stage?
Definition

E-CDK2

Term
What cyclin is typically found during the S phase of the cell cycle?
Definition
A-CDK2
Term
What cyclin is typically found during the beginning of the G2 phase of the cell cycle?
Definition
B-CDC2
Term
How do cyclins control the G1 to S phase transition?
Definition

1. Growth factor activates the signaling cascade. 2. Cyclin D is expressed. 3. CyclinD/CDK4&6 phosphorylates the retinoblastoma (RB) protein to form pRB. 4. pRB lets go of the E2F transcription factor. 5. E2F goes into the nucleus and activates the transcription of cyclin E and then cyclin A later. 6. Cyclin E and CDK2 drive the cycle into the S phase

Term
What will happen in regards to the cell cycle if the retinoblastoma protein remains active and unphosphorilated?
Definition

The cell will remain in the G1 phase until the cell becomes large enough so that it can enter the S phase

Term
What do cyclins and CDKs do in regards to promotion of DNA replication?
Definition

They promote replication. CDC6 and proteins of the replication complex bind to the origins of replication and CDC6 is taken off by phosphorilation (which also initiates DNA replication)

Term
What cyclin is progression from the G2 into the M pase dependent on?
Definition

The B-CDK2 complex known as maturation-promoting complex

Term
What is proteolysis and how does this help the cell cycle? Give one example of this
Definition

Proteolysis is the degradation of proteins used in the preceding phase as well as proteins that would inhibit progression of the cycle into the next phase. The anaphase-promoting complex (APC/C) adds a 76-amino-acid protein ubiquitin to target proteins which mark them for destruction in the proteasome

Term
How do cell cycle checkpoints work?
Definition

Cells can monitor their internal and external environments and they maintain the correct order of steps as they go through the cycle. Cells can pause when defects are detected so that these issues can be fixed if possible. Once these checkpoints are passed the cell is either clear to go on with the cycle or will self-destruct

Term
What are the three major checkpoints involved in the cell cycle (that is, what do they mainly relate to?)
Definition

There is the DNA damage checkpoint, the centrosome duplication checkpoint and the spindle checkpoint

Term
What does the DNA damage checkpoint do to prevent potential problems?
Definition

The checkpoint arrests the cell cycle when DNA is damaged or when replication isn't completed. The three points when the DMA damange checkpoint is used is at the G1/S transition, in the S period and at the G2/M boundary

Term
Why is p53 such an important factor when talking about cancer and DNA damage?
Definition

p53 is a transcription factor that acts as a DNA damage sensor; p53 switches on expression of target genes that halt the cell cycle so that DNA can be repaired. If the DNA can't be repaired p53 can initiate apoptosis. Roughly 50% of all human cancers have one or more mutations within the p53 gene

Term
How does MDM2 expression affect p53 and its levels within the nucleus?
Definition

The more MDM2 the less p53. MDM2 takes p53 out of the nucleus where it is degraded by the proteasome. DNA damage will initiate the phosphorylation and acetylation of the p53 product

Term
What happens when the DNA damage checkpoint determines that apoptosis is necessary?
Definition

A cascade of proteolysis is initiated which culminates in cell death. The proteases involved are called caspases

Term
What happens when Bc12 is overexpressed through something like activation of an oncogene?
Definition

Apoptosis, in this case, is blocked and the cell basically becomes immortalized (cancerous)

Term
What happens when Bax and Bc12 production in balanced within cells?
Definition

A Bax-Bc12 heterodimer is produced and the cells grow and go through apoptosis like normal

Term
What happens when Bax is overexpressed in cells and more p53 than normal is expressed?
Definition

The cells automatically go through apoptosis

Term
What is the primary function of the centrosome duplication checkpoint and how does it accomplish this oversight?
Definition

It functions to maintain the normal compliment of chromosomes by monitoring the spindle formation (correlated with cyclin B-CDC2 production) and coordinating with the spindle checkpoint and the exit from mitosis

Term
What is the spindle checkpoint and how does it accomplish its oversight?
Definition

The spindle checkpoint monitors the assembly of the spindle and its attachment to the kinetochores. Incorrect or unbalanced attachment to the spindle activates spindle checkpoint proteins which trigger a block in the separation of the sister chromatids by preveting activation of the anaphase-promoting complex (APC/C)

Term
When the correct attachment of chromatids happens in the cells what genes are essentially active and which ones aren't?
Definition

CDC20 and APC/C are active but Bub1, 2 and 3 as well as Mad1, 2 and 3 and MPS1 are all inactive

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