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A sequence of enzymatically catalyzed chemical reactions occuring in a cell- determined by enzymes |
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The principle that chemical reactions occur because energy is gained as particles collide. |
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Refers to the sum of all chemical reactions within a living organism |
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All decomposition reactions in a living organism. The breakdown of complex organic compounds into simpler ones. |
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All synthesis reactions in a living organism; the building of complex organic molecules from simpler ones. |
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The collision energy required for a chemical reaction. |
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The frequency of collisions containing sufficient energy to bring about a reaction- depends on the number of reactant molecules at or above the activation energy level. |
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A substance that increases the rate of a chemical reaction but is not altered itself. |
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A molecule that catalyzes biochemical reactions in a living organism, usually a protein. |
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Any compound with which an enzyme reacts. |
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Although some enzymes consist entirely of proteins, most consist of both a protein portion called an apoenzyme, and a non protein component, called a cofactor. If the cofactor is an organic molecule, it is called a coenzyme. Apoenzymes are inactive by themselves; they must be activated by cofactors. Together, the apoenzyme and cofactor form a holoenzyme. |
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Nicotinamide Adenine Dinucleotide (NAD+) |
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- Contains derivatives of the B vitamin niacin
- functions as electron carrier
- primarily involved in catabolic (energy yielding) reactions
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Nictinamide Adenine Dinucleotide Phosphate (NADP+) |
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- Contains derivatives of the B vitamin niacin
- functions as electron carrier
- primarily involved in anabolic (energy-requiring) reactions
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Mechanism of Enzymatic Action |
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- The surface of the substrate contacts a specific region of the surface of the enzyme molecule, called the active site.
- A temporary intermediate compound forms, called an enzyme-substrate complex.
- The substrate molecule is transformed by the rearrangement of existing atoms, the breakdown of the substrate molecule, or in combination with another substrate molecule.
- The transformed substrate molecules- the products of the reaction- are released from the enzyme molecule because they no longer fit in the active site of the enzyme.
- The unchanged enzyme is now free to react with other substrate molecules.
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Factors Influencing Enzyme Activity |
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- Termperature- rate increases as temp increases, however elevation beyond a certain temp (optimal temp) drastically reduces the rate.
- pH- Above or below optimal pH rate for an enzyme will reduce the rate. Extreme changes in pH can cause denaturation.
- Substrate Concentration- with increasing concentration of substrate molecules, the rate of reaction increases until the active sites on all enzyme molecules are filled, at which point the max rate of reaction is reached.
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Competitive Inhibitors fill the active site of an enzyme and compete with the normal substrate for the active site. Unlike the substrate, it does not undergo any reaction to form products- some are reversible, some are not.
Noncompetitive Inhibitors do not compete with the substrate for the enzyme's active site; instead, they interact with another part of the enzyme.
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Oxidation-Reduction Reactions |
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Oxidation: Removal of electrons
Reduction: Gain of electrons
Redox Reaction: An oxidation reaction paired with a reduction reaction.
In biological systems, the electrons are often assiociated with hydrogen atoms. Biological oxidations are often dehydrogenations. |
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ATP is generated by the phosphorylation of ADP. Energy from the transfer of a high-energy PO4- to ADP generates ATP directly from a substrate:
C-C-C~P + ADP-->C-C-C + ATP
Energy released from transfer of electrons (oxidation) of one compound to another (reduction) is used to generate ATP in the electron transport chain and chemiosimosis. |
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The Electron Transport Chain |
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A series of carrier molecules that are, in turn, oxidized and reduced as electrons are passed down the chain. Energy released can be used to produce ATP by chemiosmosis. |
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1. Glycolisis-The oxidation of glucose to pyruvic acid
2. The Krebs Cycle- oxidation of acetyl CoA (a derivative of pyruvic acid) to carbon dioxide, with the production of some ATP, energy-containing NADH, and another reduced electron carrier, FADH2 (the reduced form of flavin adenine dinucleotide).
3. In the electron transport chain (system), the energy of the electrosn is used to produce a great deal of ATP. |
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Physical Requirements for Growth |
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Minimum, optimum & maximum growth temperatures exist for microbial growth. |
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Increase in number of cells, not cell size. Populations and colonies form. |
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What is the role of oxygen in electron transport? |
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It is the final hydrogen and/or electron acceptor. |
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What type of cells carry out fermentation and why? What are the typical products of fermentation? |
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Any cell that can or must metabolize in the absence of O2. They do it to recycle their NADH to NAD. Products- acids, alcohols and gases. |
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At what pH do most bacteria grow? |
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Between 6.5-7.5.
Molds & yeasts grow between 5 & 6. |
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The measurement of solute concentration- |
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lower osmotic pressure- cell wall protects, but poor growth weight. |
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Equal osmotic pressure- provides conditions for optimum growth. |
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higher osmotic pressure- increase salt or sugar, cause plasmolysis- shrinkage of cytoplasm. |
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Chemical Requirements for Growth of Chemoheterotrophs |
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Carbon, Nitrogen, Sulfur, Phosphorus |
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3 Temperature Groups in growth |
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Phsycrophiles- Optimum temp below 25 C
Mesophiles- Optimum temp 25-40 C
Thermophiles- Optimum temp above 40 C |
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