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Micro- Unit 2
Chapters 5, 6, 7, 20
31
Microbiology
Undergraduate 2
06/14/2011

Additional Microbiology Flashcards

 


 

Cards

Term
Metabolic Pathway
Definition
A sequence of enzymatically catalyzed chemical reactions occuring in a cell- determined by enzymes
Term
Collision Theory
Definition
The principle that chemical reactions occur because energy is gained as particles collide.
Term
Metabolism
Definition
Refers to the sum of all chemical reactions within a living organism
Term
Catabolism
Definition
All decomposition reactions in a living organism.  The breakdown of complex organic compounds into simpler ones.
Term
Anabolism
Definition
All synthesis reactions in a living organism; the building of complex organic molecules from simpler ones.
Term
Activation Energy
Definition
The collision energy required for a chemical reaction.
Term
Reaction Rate
Definition
The frequency of collisions containing sufficient energy to bring about a reaction- depends on the number of reactant molecules at or above the activation energy level.
Term
Catalyst
Definition
A substance that increases the rate of a chemical reaction but is not altered itself.
Term
Enzyme
Definition
A molecule that catalyzes biochemical reactions in a living organism, usually a protein.
Term
Substrate
Definition
Any compound with which an enzyme reacts.
Term
Enzyme Components
Definition
Although some enzymes consist entirely of proteins, most consist of both a protein portion called an apoenzyme, and a non protein component, called a cofactor. If the cofactor is an organic molecule, it is called a coenzyme. Apoenzymes are inactive by themselves; they must be activated by cofactors. Together, the apoenzyme and cofactor form a holoenzyme.
Term
Nicotinamide Adenine Dinucleotide (NAD+)
Definition
  • Contains derivatives of the B vitamin niacin
  • functions as electron carrier
  • primarily involved in catabolic (energy yielding) reactions
Term
Nictinamide Adenine Dinucleotide Phosphate (NADP+)
Definition
  • Contains derivatives of the B vitamin niacin
  • functions as electron carrier
  • primarily involved in anabolic (energy-requiring) reactions
Term
Mechanism of Enzymatic Action
Definition
  1. The surface of the substrate contacts a specific region of the surface of the enzyme molecule, called the active site.
  2. A temporary intermediate compound forms, called an enzyme-substrate complex.
  3. The substrate molecule is transformed by the rearrangement of existing atoms, the breakdown of the substrate molecule, or in combination with another substrate molecule.
  4. The transformed substrate molecules- the products of the reaction- are released from the enzyme molecule because they no longer fit in the active site of the enzyme.
  5. The unchanged enzyme is now free to react with other substrate molecules.
Term
Factors Influencing Enzyme Activity
Definition
  1. Termperature- rate increases as temp increases, however elevation beyond a certain temp (optimal temp) drastically reduces the rate.
  2. pH- Above or below optimal pH rate for an enzyme will reduce the rate. Extreme changes in pH can cause denaturation.
  3. Substrate Concentration- with increasing concentration of substrate molecules, the rate of reaction increases until the active sites on all enzyme molecules are filled, at which point the max rate of reaction is reached.
Term
Enzyme Inhibitors
Definition

Competitive Inhibitors fill the active site of an enzyme and compete with the normal substrate for the active site. Unlike the substrate, it does not undergo any reaction to form products- some are reversible, some are not.

Noncompetitive Inhibitors do not compete with the substrate for the enzyme's active site; instead, they interact with another part of the enzyme.

 

Term
Oxidation-Reduction Reactions
Definition

Oxidation: Removal of electrons

Reduction: Gain of electrons

Redox Reaction: An oxidation reaction paired with a reduction reaction.

 

In biological systems, the electrons are often assiociated with hydrogen atoms.  Biological oxidations are often dehydrogenations.

Term
Generation of ATP
Definition

ATP is generated by the phosphorylation of ADP. Energy from the transfer of a high-energy PO4- to ADP generates ATP directly from a substrate:

C-C-C~P + ADP-->C-C-C + ATP

 

Energy released from transfer of electrons (oxidation) of one compound to another (reduction) is used to generate ATP in the electron transport chain and chemiosimosis.

Term
The Electron Transport Chain
Definition
A series of carrier molecules that are, in turn, oxidized and reduced as electrons are passed down the chain. Energy released can be used to produce ATP by chemiosmosis.
Term
Carbohydrate Catabolism
Definition

1. Glycolisis-The oxidation of glucose to pyruvic acid

2. The Krebs Cycle- oxidation of acetyl CoA (a derivative of pyruvic acid) to carbon dioxide, with the production of some ATP, energy-containing NADH, and another reduced electron carrier, FADH2 (the reduced form of flavin adenine dinucleotide).

3. In the electron transport chain (system), the energy of the electrosn is used to produce a great deal of ATP.

Term
Physical Requirements for Growth
Definition
Minimum, optimum & maximum growth temperatures exist for microbial growth.
Term
Microbial Growth
Definition
Increase in number of cells, not cell size. Populations and colonies form.
Term
What is the role of oxygen in electron transport?
Definition
It is the final hydrogen and/or electron acceptor.
Term
What type of cells carry out fermentation and why? What are the typical products of fermentation?
Definition
Any cell that can or must metabolize in the absence of O2. They do it to recycle their NADH to NAD.
Products- acids, alcohols and gases.
Term
At what pH do most bacteria grow?
Definition
Between 6.5-7.5.

Molds & yeasts grow between 5 & 6.
Term
Osmotic Pressure
Definition
The measurement of solute concentration-
Term
Hypotonic
Definition
lower osmotic pressure- cell wall protects, but poor growth weight.
Term
Isotonic
Definition
Equal osmotic pressure- provides conditions for optimum growth.
Term
Hypertonic
Definition
higher osmotic pressure- increase salt or sugar, cause plasmolysis- shrinkage of cytoplasm.
Term
Chemical Requirements for Growth of Chemoheterotrophs
Definition
Carbon, Nitrogen, Sulfur, Phosphorus
Term
3 Temperature Groups in growth
Definition
Phsycrophiles- Optimum temp below 25 C

Mesophiles- Optimum temp 25-40 C

Thermophiles- Optimum temp above 40 C
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