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Microbiology- Virology
Virus Structure and Classification (T Pierce)
19
Medical
Professional
10/29/2009

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Cards

Term
composition of viruses
Definition
  • protein coat (capsid)
  • nucleic acid core (genome)
  • core proteins
  • lipid envelope (SOME)- lipid bilayer with inserted proteins
Term
What makes a virus different from bacteria, fungi, eukaryotic cells
Definition
  • obligate intracellular parasites
  • filterable
  • contain only one kind of nucleic acid
  • self assembly, not binary fission
  • no ribosomes, respiratory enzymes, cell walls
Term
Classification of viruses based on what?
Definition
Genetic material and structure
Term
What makes an RNA + or -
Definition
  • +: directly translatable into proteins (got start codon and appropriate signals)
  • -: not directly translatable
Term
Different types of nucleic acid genomes you may see in virus
Definition
  • ss, ds, DNA, RNA
  • RNA may be (+), (-), or ambisense (+/-)
  • linear or circular
  • may be segmented (ex: influenza A)
  • may be diploid (ex: HIV)
Term
Function of core viral proteins
Definition
  • carry out functions needed for viral replication
    • nonstructural proteins
    • function in assembly and replication
      • virus encoded enzymes involved in replication (ex: reverse transcriptase)
      • histones for genome packing
      • tethering proteins linking core to capsid
Term
viral capsid: morphology, function
Definition
  • function- protect genome from nucleases
  • morphology
    • symmetrical structure with repeating units
    • repetitive structure minimizes genome size
    • icosahedral or helical symmetry (allows to be made from repeating, ID subunits aka self assemble)
      • icosahedral- regular polyhedron with 20 triangular faces and 12 vertices
      • helical- hollow tube with a helical surface
Term
lipid envelope (origin, contents, effect of damage)
Definition
  • lipid bilayer derived from host cell membrane
  • contains embedded viral proteins involved in host cell recognition/attachment
  • damage (ex: detergents) block infection
    • ex: herpesvirus, retrovirus
Term
Mechanisms of classification for viruses
Definition
  • type of genetic material
  • morphology (capsid structure, enveloped)
  • host/tissue tropism (ex: liver)
  • susceptibility to physical/chemical agents
  • immunologic properties
  • pathology (ex: giant cell formation)
  • clinical syndrome (ex: pneumonia)
Term
examples of dsDNA viruses
Definition
  • adenoviruses
  • herpesviruses
    • HSV
    • VZV
    • CMV (pneumonia, retinitis)
    • EBV (mono)
    • HHV-6, HHV-8 (roseola, Kaposi's)
  • papovaviruses (tumors of skin, mucosa)
  • polyomaviruses (neurologic infection)
  • poxviruses (smallpox)
Term
example of ssDNA viruses
Definition
parvoviruses (parvovirus B19)
Term
example of ss/dsDNA virus
Definition
  • hepadnaviruses (liver)
    • HepB virus
Term
example of dsRNA virus
Definition
  • reovirus
    • rotavirus (gastroenteritis)
Term
examples + strand ssRNA
Definition
  • picornaviruses
  • flaviviruses
  • hepaciviruses (hep C)
  • togavirus (rubella)
  • cornaviruses (common cold, sars)
  • caliciviruses (gastroenteritis)

 

Term
examples of - strand ssRNA viruses
Definition
  • orthomyxoviruses (ex: influenza)
  • parmyxoviruses (measles, mumps)
  • rhabdoviruses (rabies)
  • filoviruses (ebola)
Term
examples of ambisense RNA viruses
Definition
  • arenaviruses (Lassa fever)
  • bunyaviruses (encephalitis, hemorrhagic fever)
Term
examples of retroviruses
Definition
  • HIV
  • human T cell lymphotrophic viruses
Term
define prions
Definition
  • infectious agents that contain protein coat but no nucleic acid
  • associated with transmissible encephalopathies
  • may represent corrupted cellular protein
Term
Other filterable pathogens
Definition
  • prions
  • non animal viroids
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