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microbiology
exam3
62
Biology
Undergraduate 1
11/04/2012

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Term
Prebiotics definition
Definition
Prebiotics are the preferential food for friendly beneficial bacteria colonizing the digestive track: Colonic Food
Term
Prebiotic examples
Definition
Fructooligosaccharide (aka oligofructose, plants)
Isomaltooligosaccharide (corn, wheat)
Xylooligosaccharide
Inulin – in group of dietary fibers known as fructans
(wheat, banana, onions, garlic, leek)
Fiber
Oligmate
Palatinose (Isomaltulose) in honey
Pyrodextrin
Raftiline
Term
Synbiotic
Definition
a combination of one or more probiotics and prebiotics
Term
Functional Foods:
Definition
Substances or supplements administered to obtain a specific result “beyond those of regular nutrition.”

Also called “nutriceuticals” or biotherapeutics”
Term
Criteria for eligibility as Prebiotic
Definition
Resistance to gastric acidity, to hydrolysis by mammalian enzymes, and to gastrointestinal absorption
2) Selective stimulation of the growth and / or activity of those intestinal bacteria that contribute to health and well-being
3) Fermentation by intestinal microflora; to produce short-chain fatty acids (SCFA) and gas
4) Induce luminal or systemic beneficial effects
Term
Prebiotic functions
Definition
Non-digestible food supplements or ingredients
Not absorbed or degraded
Alter the balance of intestinal flora (microorganisms)
Act as substrates that stimulate the growth of beneficial bacteria (Lactobacillus and Bifidobacteria)
Term
Probiotics
Definition
Non-pathogenic live microbial food supplements

Live organisms that benefit the host animal by improving intestinal microbial balance
Term
Intestinal Microecology
Definition
Gut Wall

Intestinal
Microflora

Gastro Intestinal Secretions
Term
Probiotics examples
Definition
Lactobacilli – anerobic, gram (+) rods
L. Casei, L. Plantarum
L. acidophilus, L. reuteri
Bifidobacteria – anerobic, gram (+) rods
Term
Intestinal Flora Functions:
Definition
Protects the host
Stimulates immune function
Produces antimicrobial substances
Trophic effect on intestinal epithelium
Maintains the enterohepatic (liver to intestine) circulation of bile acids
Involved in metabolic processes (i.e., fermentation) in the colon
Term
Intestinal Flora
Definition
A symbiotic relationship with the host
Term
Intestinal Microflora: Location & Prevalence
Definition
Rare in the esophagus
Uncommon in the stomach
Term
number of flora in the jejunum
Definition
10^5
Term
number of flora in the colon
Definition
10^10 – 10^12
Term
Formation & Maintenance of Gut Flora (Microbiota)
Definition
Genetic factors
Age
Gender
Mother’s microbiology
Mode of delivery
Feeding practices
Breast-fed – Bifidobacterium
Bottle-fed - Lactobacillus
Co-morbid conditions
Medications
Diet
Term
Human fecal flora Aerobic organisms
Definition
E. coli
Enterococcus sp.
Streptococcus sp.
Term
Human fecal flora anaerobic organisms
Definition
Anaerobic cocci
Bacteroides sp.
Eubacterium sp.
Bifidobacterium sp.
Lactobacillus sp.
Term
Conditions that can disrupt normal gut flora
Definition
Medications
Antibiotics
Surgery
Radiation
Diet
Co-morbid diseases
Crohn’s - at type of inflammatory bowel disease
Sclerodermais - a chronic systemic autoimmunce disease
Term
intestine ecological barrier
Definition
normal inhabitant flora within intestine
Term
intestine Mechanical barrier
Definition
mucous epithelia
Term
intestine Immune barrier
Definition
secretory IgA, intraepithelial lymphocytes, macrophages, neutrophils, natural killer cells)
Term
Dys-Biosis:
Definition
Abnormal microbial colonization of the intestine Quantity and Quality of flora become Pathological & Harmful.
Term
Key Properties of Probiotics
Definition
Bacteria of human origin
Safe to use in large amounts in clinical practice
Resist secretions of the upper GI tract
Survive passage through the GI tract
Adhere to human intestinal cells
Term
Key properties of Probiotics
Definition
Able to colonize the lumen of the GI tract
Help to promote the cells against invasion by pathogens
Produce antimicrobial substances
Hydrogen peroxide
Organic acids
Bacteriocins (bacterial static compounds)
Antagonize carcinogenic and pathogenic flora
Term
Short chain fatty acids (SCFAs)
Definition
the products of colonic bacterial degradation of unabsorbed starch and non-starch polysaccharide
Term
SCFA examples
Definition
Acetate, Propionate, and Butyrate and Lactic acid.
Term
Butyrate
Definition
the preferred energy substrate for the colonocyte

provides fuel (nutrition) for ileal (the final section of the small intestine)
Term
Acetate
Definition
increases colonic blood flow and enhances ileal motility
Term
Ileo - Colonic Brake
Definition
contractions of the
Ileum (the final section of the small intestine)
Term
Probiotics: Potential Uses
Definition
Irritable Bowel Syndrome (IBS)
Inflammatory Bowel Disease (IBD)
Infectious diarrhea in children (i.e., rotavirus)
Traveler’s diarrhea
Antibiotic associated diarrhea
Clostridium difficile
Term
Virulence as a process is
Definition
MULTIFACTORIAL, MULTIDIMENSIONAL
Term
Common bacteria found in the normal flora
Definition
Staphylococcus aureus, Bacteroides and Enterobacteriaceae, Pseudmonas aeruginosa
Term
We are constantly also exposed to bacteria from:
Definition
air,
water
soil
food
other animals etc…
Term
nosocomial
Definition
hospital-acquired infection
Term
compromised patients
Definition
defenses are weakened
Term
Steps in successful infection
Definition
Sex comes before disease
acquire virulence genes
Sense environment
and Switch virulence genes on and off
Swim to site of infection
Stick to site of infection
Scavenge nutrients
especially iron
Survive stress
Stealth
avoid immune system
Strike-back
damage host tissues
Subvert
host cell cytoskeletal and signalling pathways
Spread
through cells and organs
Scatter
Term
Bacteria have three ways of exchanging DNA
Definition
Transformation
cells take up naked DNA
Transduction
phages carry DNA
Conjugation
cells mate through specialised appendages
Term
Bacterial Sex
Definition
acquiring virulence genes
Term
Bacterial Sex Mobile genetic elements
Definition
Transposons
ST enterotoxin genes
Virulence Plasmids
e.g. TTSSs in Shigella, Yersinia; toxins in Salmonella, E. coli, anthrax
Phage-encoded virulence
e.g. botulinum toxins, diphtheria toxin, shiga-like toxin (linked to lysis), staphylococcal toxins, TTSS substrates in Salmonella.
Term
Common adherence mechanisms
Definition
Capsules and slime
Biofilm formation (multicellular organism)
Term
MSCRAMMs
Definition
microbial surface components recognizing adhesive matrix molecule
Term
Gram-negative adhesins
Definition
Fimbriae, Afimbrial adhesins
Outer Membrane Proteins
Types III-IV secretion systems
Term
Siderophores
Definition
chelate available iron & transport it into bacteria
Term
stresses
Definition
Acid stress within stomach
Heat shock during fever
Oxidative stress within phagocytes
Term
Endotoxin
Definition
Term
Exotoxins
Definition
Term
Actions of Endotoxin
Definition
Pyrogenicity – fever producing
Leucopenia then leucocytosis – high white blood cell count
Hypotension
“Gram-negative Shock”
Life-threatening complication of septicaemia
e.g. in meningococcal infection, in oncology patients
Endotoxic shock seen with dirty intravenous equipment
Term
phospholipases
Definition
degrade components of the membrane
Term
Biofilm
Definition
are communities of microorganisms in a matrix that joins them together and to living or inert substrates
Term
Submerged biofilms
Definition
to form columns and mushroom like projections that are separated by water-filled channels
Term
Floating biofilms
Definition
form a skin or pellicle at the air- liquid interface – shows organization of cells with the matrix at the outside
Term
Steps in biofilm formation
Definition
Initiation of biofilm formation – interaction of cells with a surface or with each other
Films aggregate
Then the cells form an extracellular matrix
Structure of biofilms are dramatically different due to the specific organisms in the film and environmental conditions
Term
Matrix
Definition
components of the matrix are extracellular polysaccharides and proteins
Term
Confocal scanning laser microscopy
Definition
Allows visualization of hydrated state
3D reconstruction
Term
Biofilms characteristics
Definition
antiobiotic resistant
containing 1 or more microbial species
Protection from physical injury
Promote horizontal gene transfer
Enhance cell-cell communication
Term
Quorum sensing
Definition
Intermicrobe communication
Signaling (language) system that allows bacteria to sense cell density
Term
Why quorum sensing?
Definition
Bacterial population can coordinately control gene expression of entire community
Allows bacteria to act as multicellular organisms
Allow bacteria to obtain nutrients from breakdown of complex polymers
Keep bacteria invisible to host defenses until enough bacteria present to overwhelm host
Term
Virulence determinants of B. burgdorferi
Definition
Motility
Manganese transporter (BmtA)
Outer-surface protein A (OspA)
Surface-located membrane protein 1
Term
Lyme disease
Definition
caused by the bacterium Borrelia burgdorferi and is transmitted to humans by the bite of infected ticks
Term
Spirochetes
Definition
Long, corkscrew-shaped Gram-negative bacteria
arrangement of axial filaments that run lengthways between cell wall and outer membrane allow movement by rotation
Term
Pathogenic species of Borrelia:
Definition
Borrelia burgdorferi; Bb (US)
- Borrelia afzelii (Asia / Europe
- Borrelia garinii
Term
Signs and Symptoms of lyme
Definition
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