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Microbiology test 1
microbiology
74
Biology
Undergraduate 2
09/22/2012

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Term
Atypical bacteria
Definition
There are three main groups of atypical bacteria
1) mycoplasma
2) rickettsia
3) chlamydia
Term
Mycoplasma
Definition
- Smaller than most bacteria (about .15-.3 µm) – smallest known microorganism to grow on agar , they only form colonies on agar plates in about 7-10 days
- There is no PG in their cell walls
- There’s no rigid shapes – not coccus, bacillus or spiral
Term
Mycoplasma - harm and treatment
Definition
a) Harm – none – rarely cause harm in healthy people, usually hospital patients
- Can cause endocarditic in hospital patients
b) Treated with tetracycline and doxycycline
Term
Rickettsia
Definition
- Smaller than most bacteria (.3-.5 µm)
- Little PG in their cell walls – a coccobacillary shape (oval)
- It’s an obligate intracellular parasites - means they must live inside living cell either animal or human
- Can’t grow in agar or in a lab
- They prefer to grow inside cells lining blood vessels called enclothelia cells (the blood brings there food and oxygen)
- They are transmitted from animal to human or human to human carried by ticks or lice. They feed off blood – looking for a blood vessel that holds hear (face and scalp). It infects the lining of the blood vessel in 7-14 days
- Rockettsia is carried in the gut of the tick to the human as a result it causes red spotted rash, high fever (up to 108 F), delirium, kidney damage
Term
Infections caused by Rickettsia
Definition
a) Two important infections caused by rickettsia are:
a. Rock mountain spotted fever (RMSF) – found on mid Atlantic/east coast – MD has perfect weather for tick season march- November
o Tetracycline and doxycline are used to treat RMSF
b. Typhus – in latin is delirious – its lice – is a common cause of kidney and brain damage (not head lice)
Term
Chlamydia
Definition
- Smaller than most bacteria (.3 µm)
- Has little PG in walls and could appear coccus or rod like- the same Chlamydia can change shape
- They are obligates intracellular parasites that need living cells to survive and prefer mucous membranes
Term
Important infections caused by chlamydia
Definition
1) Psittacosis
2) Trachoma
3) Lymphogranuloma venereum (LGV)
4) Genitor - urinary chlamydia infection
Term
Psittacosis
Definition
type of ornithosis (infection of birds)
- Also called parrot fever
- Infection of tropical birds like parrots and parakeets
- From bird to bird transmission resulting in a respiratory infection causing pneumonia then death
- Human can inhale Chlamydia from their secretions causing chronic respiratory illness with cough, fever, congestion, fatigue and rarely pneumonia and death (appears like asthma in children)
- Treatment : tetracycline
Term
Trachoma
Definition
a type of conjunctivitis (eyes)
- It’s the world’s leading cause of blindness  Chlamydia is found in animal and human urine or feces which contaminates water which then gets in your eyes. Common in highly dense urban areas or in polluted water / swimming beaches.
- Treatment : tetracycline
Term
lymphogranuloma venereum (LGV)
Definition
a sexually transmitted disease
- Infects the lymph nodes of the genital that swells them and turns them black
- Similar to syphilis, rare today, came from Asia
- Treatment: tetracycline
Term
Genitor-urinary Chlamydia infection
Definition
it’s a std
- Causes prostatitis in males, results in sterility
- Causes salpingitis , infection of fallopian tubes, and ovaries can cause sterility
- Asymptomatic, women will show no signs, men will.
- Treat with tetracycline
Term
Fungi
Definition
- Not a bacteria – eukaryotic
- Larger than bacteria
- Can be multi-cellular
- Lots of cell structures
- Have a nucleus
- Mitosis
- More than 1 chromosome
- No PG in walls
Term
2 groups of Fungi
Definition
Yeasts and mold
Term
yeast
Definition
a. Usually unicellular , oval or spherical shaped (3-7µm)
b. Usually reproduce A sexually by budding (a baby year that grows on a surface  the bud then grows to the side of the mother cell and then splits (60 minute process)
Term
four important yeasts
Definition
1) sacharomyces
2) candida albicans
3) Cryptococcus neoformans
4) Pneumocystis jiroveci
Term
Sacharomyces
Definition
oval shaped
a) Must have sugar to survive
b) Non- pathogenic beneficial used for baking and brewing (wines, vodka, potatoes)
Term
Candida albicans
Definition
– most common pathogenic yeast, causes infections called candidiasis
a) is a dimorphic yeast – meaning two forms
o at body temperature (37C) appears yeast like – treated with monistat
o at cooler temperatures it appears mold like meaning multi- cellular with spores
b) Chains of cells called pseudolyphoe – they produce blastospores that reproduce chlamydospores (survival) white discharge.
Term
Candida infections
Definition
1) thrush
2) vaginitis
3) dermatitis
4) systemic candida
Term
Thrush
Definition
(mouth)
 Infection of the mouth (tongue, gums, etc.)
 Most common in children, AIDS patients, cancer patients or chemotherapy
 White coating on tongue, gums, palate – may be bleedings
Term
Vaginitis
Definition
 White discharge, red rash or slim discomfort. 50% of all women will develop yeast infection during pregnancy. (Children get it when they are born. For the first few months the mother’s immune system protects them but then it shows up after that.)
Term
Dermatitis
Definition
(skin)
 Bright red, flaky, peeing skin rash or moist skin. When children have thrush they can drool in their crib and get a rash on their face because the yeast moves.
Term
systemic candida
Definition
(inside the body)
 Causes pneumonia, meningitis, etc.
 Occurs in severely immunosuppressed persons (can occur in a person with AIDS)
Term
candida treatment
Definition
 nystatin
 ketocomazole (clotrimozole , lotramin)
Term
Cryptococcus neoformans
Definition
a) Has a capsule around it
b) Causes an infection called cryptococcosis
Term
cryptococcosis
Definition
o Found in soils containing certain bird droppings (especially pigeons)
o Mostly a city disease
o One can inhale cryptococus in dry dusty soil
 Get a chronic respiratory illness, cough, fever, fatigue, pneumonia, scar tissue forms in long  TB like illness.
 In rare cases: can be spread to brain and spinal cord which causes encephalitis in the brain or meningitis in the spinal cord.
o Treatment: Amphotricin B
Term
Pneumocystis jiroveci
Definition
a) Crescent shape yeast
b) Causes a very severe life threatening pneumonia in very immunosuppressed people. Leading death of AIDS patience
o Used to be known as Pneumocystis carinii
o Infection referred to as Pcp (Pneumocystis carinii pneumonia)
o Treatment: Flagyl – this will get rid of the PCP but they will keep getting it again
Term
Mold
Definition
a. “true fungi”
b. Multi-cellular , eukaryotic
Term
Mold - Hypae
Definition
c. Produce long chains of cells called hypae
i. Vegetative hypae - Hypae that grow along the surface
1. Cells which attach the mold to a surface and obtain nutrients ,food
ii. Aerial hypae – grow up
1. Contain the reproductive spores
2. Molds are 3 dimensional
Term
Three categories of molds
Definition
1) common non-pathogenic molds
2) dermatophyte molds
3) systemic/dirorphic molds
Term
Common non-pathogenic molds
Definition
a. Found in soil, on plants, on objects, air , etc.
b. Most molds are common non-pathogenic molds
Term
Dermatophyte molds
Definition
a. Infect skin, hair and nails
Term
Systemic/ dimorphic molds
Definition
a. Infect inside the body
b. Most cause respiratory infections
Term
Common non pathogenic molds
Definition
1) aspergillus
2) penicilium
3) rhizopus
Term
aspergillus
Definition
most common mold
i. Produces vegetative hypae – white
ii. Produces aerial hypae ( conidiophore)
1. On top of the aerial hypae is conidium (vesicle)
2. On top of the conidium are conidiospores (black, look like curly hair all around the outside)
Term
aspergillus 2
Definition
iii. Some people are allergic to aspergillus
1. Will have respiratory problems – it’s not the aspergillus’ fault it’s the person’s immune system
iv. Some rare species of aspergillus can produce a toxin called aflatoxin or mycotoxin when aspergillus is found on peanuts or peanut products.
1. This toxin can cause liver cancer
Term
penicilium
Definition
i. Produce vegetative hypae
ii. Produce aerial hypae (conidiophore) (white)
1. On top of the aerial hypae sterigmata (phialides)
2. On top of the sterigmata are conidiospores (green-blue)
iii. Bread mold – not harmful, beneficial  produces penicillin
1. We would not have cheese without mold
Term
Rhizopus
Definition
i. Vegetative hypae(silver- white)
ii. Aerial hypae (sporangiophore)
1. Sporangiospores – ball like on top of aerial hypae
2. Sporangium – little balls inside the sporangiospores
Term
Dermatophyte molds
Definition
a. Infect skin, hair and nails
i. They need a protein called keratin (found in skin, hair and nails)– they cannot survive without keratin
Term
three common dermatophytes
Definition
1) microsprum
2) trichophytom
3) epidermophyton
Term
dermatophyte
Definition
ii. Dermatophytes produce vegetative hypae (tan) but no aerial hypae
1. Grow spore directly on top of vegetative hypae called macroconidia and also small circles called microconidia
Term
dermatophyte infection
Definition
iii. Infection occurs from direct contact with the spores – from another person
1. Dermatophytes cause a bright red raised circular rash on skin, hair loss and thickening and discoloration and cracking of nails.
a. Originally thought it was a worm so called it ringworm also known as tinea infection
Term
types of dermatiphyte infections
Definition
a. Tinea capitis – ringworm of the scalp
b. Tinea barbal – ringworm of the face
c. Tinea corpris – ringworm of the trunk
d. Tinea cruris – ringworm of the groin
e. Tinea pedis – feet
f. Treatment: griseofuluin , ketoconazole
Term
systemic molds
Definition
1) Histeplasma capulatum
2) coccidioides immitis
Term
histemplasma capulatum
Definition
i. Found mostly in mid west and eastern U.S.
ii. Vegetative hyphae – whitish tan
iii. no aerial hyphae
iv. causes infection called mistoplasmosis
v. spores thrive and mold grows in moist compact soil containing nutrients found in certain bird (members of crow family) dropping or bat droppings
1. crows, blackbirds, ravens, chickens….
2. Inhalation of spores causes respiratory illness
a. Chronic fatigue , cough, congestion , pneumonia
b. TB like illness
3. Treatment : amphotericin B
Term
coccidioides immitis
Definition
i. Infection called coccidioidomycosis (also known as valley fever)
ii. Vegetative hyphae – white
iii. No aerial hyphae
iv. Spores called arthrospores
v. Thrives in dry , desert like soils of southwestern U.S.
1. Arizona, Nevada , California
vi. Inhale spores  TB like illness
1. Scarring of lungs , cavitations – open sores in lungs
vii. Treatment – amphotericin B
Term
viruses
Definition
- Smallest known infectious agents
- Measured in nanometers
- About 1000x smaller than bacteria
- Consist of proteins head (capsid) which is hollow and contains DNA or RNA
- Viruses also known as necleocapsid or nucleoprotein
Term
living
Definition
- viruses can be reproduced at very rapid rate
- 1  50,000 viruses in 2-3 hours
- Have genetic material (DNA or RNA)
- Can undergo genetic change (mutation – evolve, adapt)
Term
non living
Definition
- No cell structure
- No cytoplasm
- No water
- Carry out no
- Have few if any enzymes
- Obligate intra cell parasites
Term
How do we identify a disease as being caused by a virus?
Definition
1) Viruses are too small to be seen using a light microscope
2) Viruses can’t grow on agar plates
3) Viruses have DNA or RNA but not both
Term
Types of viruses:
Definition
1) Animal viruses – infect animal cells
2) Plant viruses – infect plant cells
3) Bacterial viruses – infect bacteria  bacteriophage
4) Fungal viruses – infect yeasts and molds – fungi  mycophage
(virus = phage
Term
Viruses are also species specific
Definition
a. Human viruses
b. Kanine viruses – dogs , wolves
c. Equine viruses – horses
d. Feline viruses – cats
e. Avian virus – birds
- Rabies = exception to rule , affects multiple species
- West nile, Manta virus and a few others are also exception but cause different infections in different species
Term
Viruses are tissue specific
Definition
a. Dermatotropic – (human) skin
b. Pneumotropic – respirtatory system
c. Hepatotropic – Liver
d. Neurotropic – Nervous system
e. Lymphotropic – Lymphocytes – WBC’s ex:HIV
Term
Virus shapes
Definition
1) icosahedtral shape
2) cylinrical or helical shape
3) complex shape
Term
Icosahedtral shape
Definition
 Some viruses have protein spikes for attachment
 Head/capsid , protein, hollow , DNA or RNA
Term
Cylinrical or Helical shape
Definition
 Capsid – protein, hollow inside is RNA
 1 helical animal virus - rabies
Term
Complex Shape
Definition
 Hollow head – contains DNA
 Tube (tail) – hollow ,protein
 Base plate
 Sheath , colar , pins tail fibers
Term
virus life cycles
Definition
1) productive life cycle of an animal virus
2) provirus life cycle of an animal virus
3)lytic life cycle of a bacterial virus
4)lysogenic life cycle of a bacterial virus
Term
productive life cycle of an animal virus (a-b)
Definition
a. Attachment to a host cell
i. Reversible, irreversible (permanent)
ii. Example - If someone has HIV and their blood gets on your skin you won’t get HIV it has to get into your blood and attach to lymphocytes in order for you to catch it
b. Entry of the virus into the host cell by endocytosis (cell takes the virus in)
Term
productive life cycle of an animal virus (c-e)
Definition
c. The uncoating of the virus head
i. The host cell degrades/ breaks down the head of the virus (it eats the head) releasing the viral DNA ( the host cell things the virus DNA is its own and therefore it does not eat the DNA)
d. The host cell transports the viral DNA to its nucleus
e. The host cell attaches viral DNA to one of its chromosomes
Term
productive life cycle of an animal virus (f-g)
Definition
f. Viral DNA takes over control of host cell and partially shut down the host cell (host cell cannot reproduce itself). It does not fully shut it down because it needs it to do its work.
g. The viral DNA directs the host cell to make copies of the viral DNA. It will make 10,000-50,000 in one to two hours (being made in nucleus)
Term
productive life cycle of an animal virus (h-j)
Definition
h. The host cell makes copies of the viral heads (being made in ribosomes)
i. Assembly of mature viruses. Host cell enzymes carry the viral DNA to the heads and then the DNA is inserted into the heads
j. The viruses are then released from the cell by reverse endocytosis also called budding out.
Term
productive life cycle of an animal virus (k-l)
Definition
k. Re-infection of more cells
l. Result is the host cell is dead
 If the virus tears a piece of the membrane (envelope) cell dies faster and envelope hides the virus from the immune system
Term
provirus life cycle (a-c)
Definition
a. Attachment to a host cell
i. Reversible, irreversible (permanent)
ii. Example - If someone has HIV and their blood gets on your skin you won’t get HIV it has to get into your blood and attach to lymphocytes in order for you to catch it
b. Entry of the virus into the host cell by endocytosis (cell takes the virus in)
c. The uncoating of the virus head
iii. The host cell degrades/ breaks down the head of the virus (it eats the head) releasing the viral DNA ( the host cell things the virus DNA is its own and therefore it does not eat the DNA)
Term
provirus life cycle (d-g)
Definition
d. The host cell transports the viral DNA to its nucleus
e. The host cell attaches viral DNA to one of its chromosomes
f. No take over and no shutdown – infected lives and reproduces as usual
g. The viral DNA (virogene) is replicated with the host cell DNA
Term
provirus life cycle
Definition
- If the viral DNA ever separates from the host DNA  take over and shutdown host cell and go to steps f-k of the productive life cycle – slow virus disease –
- Chicken pox and shingles are the same virus
- If the virogene separates from the host DNA but does not take over the cell it can cause a mutation of that cell  cancer
Term
Lytic life cycle of a bacterial virus(a-d)
Definition
a. Attachment of the virus to the wall of a bacteria
b. Injection of viral DNA through hollow tail
c. Viral DNA attaches to the bacterial DNA
d. Viral DNA takes over and shuts down the bacteria
Term
Lytic life cycle of a bacterial virus(e-i)
Definition
e. New viral DNA copies are made 100-200
f. New viral heads, tails etc are made
g. Assembly
h. Bacteria bursts open releasing the viruses
i. Re-infection
Term
Lysogenic life cycle of a bacterial virus
Definition
a. Attachment
b. Injection
c. Viral DNA attaches to the bacterial DNA
d. No take out no shutdown
e. Prophage – viral DNA remains attached to bacterial DNA
Term
Two main defenses against these viruses
Definition
1) neutralizing antibodies
2) interferons
Term
neutralizing antibodies
Definition
 proteins made by the immune system against a specific virus after exposure to that virus
 antibodies will remain in circulation for years and will attach and cover the head of that same virus type
 blocking the virus from attaching to body cells
• vaccines
Term
interferons
Definition
 Proteins made in virus infected cells
 Interferons pass into surrounding cell and black virus take over and replication in these cells
 Interferons are non- specific
Term
antiviral medications
Definition
1) DNA inhibitors
2) Protease inhibitors
Term
DNA inhibitors
Definition
• Idoxuridine
• Methisazone
• AZT
• Amantadine
Term
Protease inhibitors
Definition
• Retrovir
• Acyclovir
• Inverase
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