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Microbiology Lecture 4 Vocab
Microscopy
24
Biology
Undergraduate 2
01/21/2009

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Term
Magnification
Definition
The process of enlarging the size of something, as an optical image.
Term
Resolution
Definition

How close together two objects can be and still be separated clearly in the image

 

How much detail can be seen

Term
Contrast
Definition

How distinct the specimen is from the background

 

Can be enhanced by staining either specimen (+) or background (-)

 

Can be enhanced using optical "tricks"

Term
Immersion Oil
Definition

Use using the 100x objective of a light microscope to improve the resolution

 

It improves resolution because the oil has the same refractory index as glass preventing light from escaping by refracting causing all of the light to go into the objective

Term
Bright Field Microscope
Definition

Type of light that microscope that illuminates the field of view evenly

 

Used in lab

 

Path of light: condensor, diaphragm, specimen, objective, ocular lens

Term
Dark Field Microscope
Definition

Type of microscope that directs light toward the specimen at an angle, so that only light scattered by the specimen enters the objective lens; materials in the specimen stand out as bright objects against a dark background

 

Term
Dark Field Condenser
Definition

Block light that goes thru specimen so it is illuminated thru the side

 

Like the dust example used in class

Term
Phase Contrast Microscope
Definition
Type of light microscope that employs special optical devices to amplify the difference in the refractive index of a cell and the surrounding medium, increasing the contrast of the image
Term

Phase Plate (=phase shifting element)

Definition
Rear focal plane of objective?
Term
Differential Interference Contrast Microscopes
Definition
Type of light microscope that employs optical devices to cause the specimen to appear as a 3-D image
Term
Wollaston Prism
Definition

Used in interference microscope to separate incoming light into perpendicular polarized components and it then recombines incoming polarized light into the same polarization

 

See figure in notes

Term
90° Polarized Light
Definition
What happens to light when it is in interference microscope, it gets separated in to two beams of 90° polarized light in order to dected 3-D details in the sample
Term
Fluorescence Microscope
Definition

Special type of microscope used to observe cells that have been stained or tagged with fluoresent dyes

 

Uses excitation wavelengths as illuminating light, can see emission wavelength of fluorescently-labeled specimen

Term
Confocal Scanning Laser Microscope
Definition

Type of microscope that focuses a laser beam to illuminate a given point on one vertical plane of a specimen; after successive regions and planes have been scanned, a computer can construct a 3-D image of a thick structure

 

Uses an aperture to shut out light from all but one focal plane of the object. Computer builds up 3-D object plane by plane

Term
Confocal Pinhole
Definition

Light goes thru pinhole to detector

 

You can move pin hole to get multiple images at different planes to make an overall image

Term
Transmission Electron Microscope (TEM)
Definition

Type of microscope that directs a beam of electrons at a specimen; used to observe fine details of cell structure

 

Damages specimen after multiple uses

 

Requires that specimen to be sectioned and extensively fixed and stained

Term
Scanning Electron Microscope (SEM)
Definition
Type of electron microscope that scans a beam of electrons back and forth over the surface of a specimen; used for observing surface details, but not internal structure of cells
Term
Electron Cryotomography
Definition

Less energetic electrons, less damage to specimen

 

Rotate baterium around source of electrons, takes images at multiple angles

 

See internal details in 3-D

 

At cold temps so specimen doesn't degrade

Term
Atomic Force Microscopy
Definition

Type of scanning probe microscope that has a tip mounted so it can bend in response to the slightest force between the tip and the sample

 

Electric field is monitored at the tip of a nanotube probe

 

Field varies as probe is pushed over a surface

 

Can see atoms.

Term
Simple Stain
Definition

Staining technique that employs a basic dye to impart color to cells

 

Basic (+) dye attaches to (-) phospholipid head groups

 

All cells stained the same color

Term
Differential Stains
Definition

Type of staining procedure used to distinguish one group of bacteria from another by taking advantage of the fact that certain bacteria have distinctly different chemical structures in some of their components

 

More than one stain used

Term
Gram Stain
Definition

Staining technique that divides bacteria into two groups, Gram (+) or Gram (-), on the basis of color; among bacteria, the staining reaction correlates well with cell wall structure (thickness)

 

Pink = thin (gram -)

Purple = thick (gram +)

 

1st purple, then alcohol decolorizes thin, 2nd pink identifies thin

Term
Acid-Fast Stain
Definition

A procedure used to stain certain microorganisms, particularly members of the genus Mycobacterium, thatdo not readily take up dyes used in microbiology

 

Differentiates based on waxy coating impervious to acidified alcohol

 

Red = acid-fast, Blue = not

 

1st red, 2nd decolorize w/acidified alcohol, 3rd blue not acid fast

Term
Negative Stain
Definition
Staining technique that employs an acidic dye to stain the background against which colorless cells can be seen
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