Term
thick slime layer of a bacteria is called what? 2 |
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Definition
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Why are Special techniques have to be used to stain a capsule? |
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Definition
b/c capsule is damaged with heat fixxing, capsules also repel most stains |
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capsule staining begins with what? cells are spread in a film with what? and are not What?
what kind of dye are used for capsule staining?
what do they appear like on microscope? |
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Definition
capsule stain- negative stain
on acidic film-no heat fixing
indian dye
halo
afterwards. similar neg staining protocol |
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Term
resting stages of genera bacillus and clostridun, it's function |
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Definition
resting stages called endospores when they exhaust essential nutrients. |
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Term
what function does endospre serve |
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Definition
dorment stage of in bacterial help protect against enviromental conditions not suitable for growth
--> making stains hard to penetrate keratin of cell wall
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Definition
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two different kinds of shapes |
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Definition
Spherical or elliptical (oval) |
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method using to stain endospores |
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Definition
Schaeffer-Fulton
"futon shaver" |
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Term
stain used for endospore
stain used for vegetative portion of cell
color of each |
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Definition
malachite green to stain the endospore
safranin to stain the vegetative portion Endospores will be green Vegetative cells and spore mother cells will be pink
GIVES
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Term
function of streak plate method |
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Definition
isolate mixed colonies to produce COLONIES (one type of cell) or colony-forming unit (CFU)
mixed--> isolated |
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Term
2 types of streak methods |
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Definition
T-streak & quadrant streak
T quadrant |
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Term
function of streak plating |
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Definition
Purpose is to reduce the number of cells being spread with each successive series of streaks thus diluting the concentration of cells. |
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Term
wat should we not do when preparing streaks |
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Definition
Do NOT Gouge the Agar!! Try to make all streaks as close as possible |
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Definition
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Definition
ABILITY TO LIVE WITH OXY PRESENT |
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Definition
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Definition
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Definition
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Definition
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Term
AEROTOLERANT ANAEROBES/ FACULATIVE ANAEROBES |
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Definition
DO NOT REQUIRE AND ARE NOT NEG AFFECTED BY O2 |
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Definition
DO NOT REQUIRE O2
BUT DOES NOT MEAN IT IS HARMFUL EITHER |
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Definition
FLEXIBLE, NOT ADVERSELY AFFECTED BY O2 |
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Definition
hates O2- DOES NOT WANT IT AT ALL |
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Term
WHERE DOES OBLIGATE GROW (STRICT) |
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Definition
TOPWHERE OXYGEN IN ABUNDANT |
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Definition
FLEXIBLE, GROWTH IS MORE RAPID WITH, BUT WILL DO WITHOUT |
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Term
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Definition
Grow equally well whether oxygen is present or not Do not require oxygen and are not adversely affected by it.
"IMMUNE" |
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Term
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Definition
- Survive only in environments containing lower than atmospheric levels of oxygen.
- DESIRE SMALL AMOUNTS |
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Term
HABITAT OF Obligate (strict) anaerobes |
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Definition
DEEP MUD, LAKES,OCEANS AND SOILS |
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Term
WHAT FUNCTION DOES INOCULATING FLUID THIOGLUCOLLATE MEDIA DO?
what kind of agent is thio and why? |
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Definition
IT TEST FOR OXYGEN REQUIREMENTS OF AN ORG.
-SUPPORTS GROWTH OF BOTH AERIOBIC AND ANAEROBIC BACTERIA
thioglco- is a reducing agent which reduces oxygen to water |
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WHAT IS THE DYE IN THIOGLYCOLLATE, WHAT FUNCTION DOES IT SERVE?
what color does it change, what does this represent |
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Definition
DYE: RESAZURIN- INDICATOR FOR OXYGEN --> BECOMES PINK
res-a-zur-in turns pink in the pressence of oxygen |
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Term
DYE RESAZURIN BECOMES W/ COLOR IN THE PRESENCE OF OXYGEN |
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Definition
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Term
AFTER BOILING FTM BROTH AND IS PINK,(GETTING RID OF OXY) DEPENDING ON OXYGEN REQUIREMENTS WHERE WILL AEROBIC AND ANAEROBIC ORG BE LOCATED IN CONTAINER? |
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Definition
AEROBIC ORG- AT THE TOP
ANAEROBIC- BOTTOM |
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Term
FUNCTION OF ANAEROBIC JAR |
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Definition
CREATE A ANAEROBIC ENVIROMENT FOR THE CULTURE OF STRICT ANAEROBES |
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Term
WHAT IS USED TO CONVERT H2 AND 02 --> WATER IN ANAEROBIC JAR |
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Definition
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Term
KEY METABOLITES IN METABLOISM
2 |
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Definition
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Term
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Definition
NO SEVERAL DIFFERENT PRODUCTS FOR DURING REACTION |
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Term
PYRUVIC ACID IS FORMED IN WHICH PROCESS |
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Definition
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Term
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Definition
process of deriving energy from the oxidation of organic compounds, such as carbohydrates. |
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Term
Carbohydrate fermentation is the metabolic process by which |
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Definition
an organic molecule acts as an electron donor (becoming oxidized) and one or more of its organic products acts as the final electron acceptor.
OXYGEN IS NOT THE FINAL E- ACEPTOR |
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Term
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Definition
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Term
MICROORG PRESENT IN FERMEN |
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Definition
ANAEROBIC BACT/ EUKARYOTES/ YEASTS |
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Term
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Definition
determine if an organism is able to ferment glucose |
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Term
IF ORG ABLE TO FERMENT GLUCOSE W/ IS THE BYPRODUCT |
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Definition
acid will be produced and gas may be produced. |
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Term
IF ACID IS INDEED FORMED IN GLUCOSE TEST WHAT COLOR WILL OF TUBE B AND WHY? |
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Definition
YELLOW-->PHENOL RED INDICATOR
positive fermentation of glucose |
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Term
IN METHY RED AND VOGES PROSKAUER TESTS
HOW MANY MEDIAS ARE YOU USING
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Definition
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Term
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Definition
TEST FOR PRODUCTION OF MIXED ACIDS FROM GLUCOSE FERMENTATION |
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Term
HOW MANY DROPS OF METHYL RED INDICATOR ARE PLACED IN OVERNIGHT CULTURE |
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Definition
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Definition
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Definition
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Definition
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Definition
MIXED ACID FERMENTATION PRODUCT |
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Term
FUNCTION OF VOGUES MAGAZINE |
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Definition
to see if the organism produces 2,3 butanediol instead of acids from glucose fermentation |
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Term
THERE IS NO WAY TO DIRECTLY TEST FOR 2,3 BUTANEDIOL SO WHAT IS THE VOGUES REALLY TESTING FOR?? |
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Definition
ACETONIN- PRECURSOR TO 2,3 BUTANEDIOL |
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Term
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Definition
no way to test the presence of 2,3 butanediol directly. Therefore, the VP test is actually testing for the presence of acetoin, which is a precursor of 2,3 butanediol |
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Term
AFTER ADDING BARRITS REAGENT a (ALPHA NAPTHOL) And BRB + KOH(s/p 3 days)
if reagents cause acetonin to oxidize to diacetyl which further reacts with guanidine nuclei from peptone what color will be produced? |
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Definition
red or pink, indicates a positive reaction for acetoin, which tells you that the organism is a butanediol fermenter |
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Term
what does a positive reaction of acetoin indicate( red or pink) |
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Definition
org is a butanediol fermenter (remember can't direct test for this) GOal is this! |
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Term
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Definition
Tests for the precusor of acetoin, which is a precursor of 2,3 butanediol fermentation product |
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Term
in respiration final electron acceptor is always.... |
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Definition
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Term
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Definition
converts hydrogen peroxide into oxygen and wawter
h2o2--> h2 + o2
Mainly used to distinguish between staphylococcus and streptococcus** |
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Term
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Definition
test for presence of enzyme nitrate reductase |
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Term
what is enzyme nitrate reductase |
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Definition
-produced by faculative bacteria to carry out anaerobic respitation
-enzyme catalyzes the transfer of electrons from cytochrome b to nitrate reducing it to nitrite |
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Term
red or pink color change reprsents what for nitrate reduction |
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Definition
represents positive for indicating that org capable of anaerobic respiration |
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Term
function of nitrate reduction test |
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Definition
indicates org capable of anaerobic respiration |
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Term
if nitrate red test has no color change that means it's neg--> if you suspect this to be the case add some zinc dust if it turns red what does this represent |
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Definition
confirmed to be negative-
there is no color change after adding the zinc, then this indicates that the nitrate was reduced a different nitrogenous compound, not nitrite |
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Term
define oxidation
define reduction |
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Definition
- Oxidation is the loss of electrons
- Reduction is the gain of electrons
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Term
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Definition
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Term
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Definition
to differentiate org based on ability to grow when esstential nutriens are limited |
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Term
function of citrate slant |
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Definition
some organisms can utilize citrate as ONLY carbon source |
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Term
function of CITRATE PERMEASE |
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Definition
enzyme some org that only use carbon to transport citrate into the cell producing pyruvate from it |
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Term
what is contained in medium for utilization test |
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Definition
medium contains:
- sodium nitrate--C source
- ammonium phosphate--N source |
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Term
what is the indicator dye used for citrate test |
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Definition
bromthymol blue due - indicator |
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Term
as the pH increase medium color changes to what |
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Definition
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Term
bacteria using citrate and survive in media convert ______ into ____ and ____ ____ causing media to become more ____ |
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Definition
ammonium phsphate into ammonia and ammonium hydroxide, alkaline
bacteria using citrate and survive in media convert ammonium phosphate into ammonia and ammonium hydroxyde causing media to become more alkaline |
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Term
Blue color represents
green color change
can organism use citrate as sole source of carbon |
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Definition
blue-- org uses citrate as sole Carbon source
green- NO media stay green |
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Term
function of hydrolytic enzymes |
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Definition
perform hydrolytic reactions - using water to split compelx molecules |
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Term
intraceulluar vs exoenzymes |
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Definition
intracellular enzymes- catalyze the reaction inside the cell
exoenzymes- secreed from the cell to catalyze the reactions outside the cell |
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Term
3 different test for hydrolytic exoenzymes |
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Definition
1. starch hydrolysis
2. casease
3. gelatinase |
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Term
test for intracellular enzyme |
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Definition
urease
urine comes from the inside |
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Term
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Definition
amylose (linear) -losing streak
amylopectin (branched)- birds peck on trees with variety of directions
alpha-amylase and
oligo 1,6-glucosidase |
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Term
what are we using to test wheather an org can produce alpha-amylase and oligo 1,6 glucosidase? |
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Definition
Starch agar- simple plated medium of beef extract soluble starch, and agar |
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Term
if test proves positive for alpha amylase/ or oligo what does this mena |
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Definition
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Term
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Definition
iodine- turns blue with positive starch |
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Term
when starch indicator reacts with starch the media should change what color? |
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Definition
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Term
for a positive result of exoenzymes what should petri look like? |
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Definition
clear zone around bacteria |
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Term
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Definition
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Term
when do you add iodine to starch hydrolysis ( testing for exoenzymes) |
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Definition
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function of urease enzyme |
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Definition
hydrolyzes urea into ammonia and CO2 |
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Term
what will be using to determine urease prod |
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Definition
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Term
what is the ingrediants of urea broth |
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Definition
- yease extract and urea
- has phenol red as pH indicator***
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Term
what is the pH indicator in urea broth |
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Definition
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Term
if org grown in urea broth is urease, pH and color is effected how? |
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Definition
ph will increase, phenol red will change to yellow to red to PINK |
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Term
how long does urease phenol red take to complete |
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Definition
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Term
function of casein hydrolysis test |
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Definition
to test if bacteria requires protein as a source of amino acid. |
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Term
function of CASEASE enzyme?? |
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Definition
breakes down large proteins into subunits that can be brough into the cell |
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Term
for casein hydrolysis test how do you interpret result??
pos
neg |
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Definition
positive- clear zone
negative result- no clear zone |
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Term
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Definition
test to see if organism has enzyme that allows some organisms to hydrolyze gelatin |
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Term
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Definition
Gelatin is a protein derived from collagen – a component of vertebrate connective tissue. |
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Term
what is a important step in gelatinase test |
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Definition
Chill media for (4°C) ~30 mins before looking at results. |
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Term
positve or neg result of gelatinase test |
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Definition
positive- gel liquid
negative- solid gel |
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Term
Starch Hydrolysis: Polysaccharide catabolism, exoenzyme catalyzed Casein Hydrolysis: Polypeptide catabolism, exoenzyme catalyzed Urea Hydrolysis: Protein catabolism, intracellular enzyme catalyzed Gelatin Hydrolysis: Polysaccharide catabolism, exoenzyme catalyzed |
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Definition
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Term
function of combination differential media |
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Definition
- combination differential media combine compoenents of several compatible tests into one med
- include core test to differentiate members of specific bacterial group
- can be used as a follow up to selective media |
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Term
function of SIM, what does it stand for |
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Definition
sem-solid media
tests: sulfur reduction/ indole prod from tryptophan/ motility |
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Term
sulfur reaction: function of cysteine desulfurase/ thisulfate reductase |
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Definition
bacteria can reduce sulfur to hydrogen sulfide using either of 2 enzymes both produce hydrogen sulfide gas |
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Term
If the organism can reduce sulfur___will be seen in the tube. |
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Definition
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Term
indole production:
function of tryptophanase
(4) |
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Definition
bacteria that produces enzyme hydrolyze trypophan to pyruvate, ammonia, and indole |
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Term
how to tet for indole production |
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Definition
kovak's reagent is used on an inoculated, incubated culture |
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Term
kovac's reagent will react with indole to produce what? |
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Definition
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Term
what indicates a positive result for enzyme tryptophanase? |
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Definition
red color
brown means neg |
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Term
motility 3rd test function |
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Definition
stabbing technique is used, if cloudiness is seen in the media away from stab line, motility is indicated |
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Term
you want to maintain the needle how during sim motility test |
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Definition
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Term
what does the SIM motility resemble |
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Definition
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Term
how far in do you want to in, what position do you want to keep the |
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Definition
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Term
TSIA - tripple sugar iron agar
3 tests it provides |
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Definition
sugar utilization
gas production
hydrogen sulfide production |
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Term
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Definition
lactose, sucrose, glucose small amt |
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Term
what is the indicator for TSIA |
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Definition
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Term
what indicates ferrous sulfate |
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Definition
hydrogen sulfide
no color change- no sugars fermented |
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Term
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Definition
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Definition
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Term
Fastidious heterotrophs
Nonfastidious heterotrophs
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Definition
Fastidious heterotrophs – rely heavily on the environment to supply ready-made organic compounds
Nonfastidious heterotrophs – do not rely as heavily on environment. Can make some of their own compounds. ex. Autotrophs are less fastidious than the most nonfastidious heterotrophs. |
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Term
Never use what with oil immersion?? |
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Definition
Never use the coarse adjustment with the oil immersion lens! |
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Term
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Definition
Total magnification = Magnification of Objective X Magnification Of Ocular |
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Term
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Definition
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Term
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Definition
• some float on top of medium and produce a type of surface membrane |
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Term
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Definition
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Term
Uniform fine turbidity (UFT) |
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Definition
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Term
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Definition
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Term
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Definition
Bacteria are:
Simple Lack a nuclear membrane
Have circular DNA
Cell surrounded by peptidoglycan |
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Term
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Definition
a rigid curved or spiral shaped cylinder |
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Term
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Definition
Gently curved rods
part of spirilli |
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Term
spirochetes
part of spirilli |
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Definition
Slender flexible spirals are called spirochete (spirochetes) which is greek for coil of long hair |
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Term
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Definition
Gram positive (+) cells have a thicker peptidoglycan layer.
retain the primary stain of crystal violet because they have a thick outer layer of peptidoglycan that traps the dye among its high degree of teichoic acid crosslinks.
purple
pos dark
counter-intuitive |
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Term
crystal violet
water
iodine
ethanol
safranin |
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Definition
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