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Micro Lab quiz 2
N/A
61
Biology
Undergraduate 3
02/24/2009

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Term
Counts all cells alive and dead, using a hemocytometer
Definition
direct microscopic count
Term
counts only living cells that can form colonies on agar plates
Definition
Plate count
Term
Based on the principle that the greater number of cells in the population, the greater the amount of light scattered by the sample.
Definition
Turbidimetric method
Term
Estimate the weight of cells rather than the number. Measures all cells, living and dead.
Definition
Cell mass determination
Term
Titer
Definition
The number of organisms per milliliter of liquid culture or suspension.
Term
Titer calculation
Definition
T=DNP
D= dilution factor (1/(1/dilution factor))
N=number of colonies
P=plating factor (1/volume plated)
Term
What assumption is the standard plate count based on?
Definition
That each colony arose from a single bacterium.
Term
What is considered to be a countable plate?
Definition
30-300 colonies
Term
Respiration of e. coli
Definition
facultative anaerobe
Term
Which produces more energy? oxidative phosphorylation or substrate level phosphorylation
Definition
oxidative - therefore, those colonies on top of agar grow better than those within agar
Term
Microaerophiles need an O2 concentration of?
Definition
2-10% -- 20% is toxic
Term
Culturing organisms in fluid thioglycollate medium utilizes ___ gradient.
Definition
oxygen-tension
Term
Why does fluid thioglycollate contain reducing agents?
Definition
Reduces diffusion rates, so oxygen cannot penetrate into the media readily -- establishes oxygen gradient.
Term
Fluid thioglycollate medium contains __% agar, which is enough to solidify the media.
Definition
0.05%
Term
The resazurin in fluid thioglycollate medium turns ___ if O2 is present and ___ if it is absent.
Definition
Pink, yellow
Term
End products of respiration
Definition
CO2 and H2O
Term
__ is the oxidation of organic or inorganic molecules in which electrons are moved through the electron transport chain to a final inorganic TEA.
Definition
Respiration
Term
___ usually occurs under anaerobic conditions and involves the breakdown of organic compounds.
Definition
Fermentation
Term
Sugar fermentation broths contain a pH indicator called ____. It turns from ___ at pH 7 to ___ at pH 6 and below.
Definition
Bromothymol blue :: green :: yellow
Term
A positive indication of sugar fermentation is a __ color, whereas a negative indication of sugar fermentation is a __ color.
Definition
yellow :: green or blue
Term
A positive citrate test indicates production of ___. This implies that the test is based on ___.
Definition
NH :: pH
Term
What indicator is used in the citrate utilization test?
Definition
Bromo blue
Term
Fermentation tests are based on?
Definition
Acid production (measured by change in pH)
Term
What 3 things does the indole test detect?
Definition
Indole, pyruvic acid, NH
Term
What medium is used for the indole test?
Definition
tryptophan
Term
What reagents are added to the indole tests?
Definition
Kovac's reagent
Term
How are the results of an indole test interpreted?
Definition
Red layer = positive
Term
What does the methyl red test detect?
Definition
strong acid production from fermentation
Term
the result of this test is based on a change in -H
Definition
Term
What medium is used for the methyl red test?
Definition
MR-VP broth
Term
How are the results of the methyl red test interpreted?
Definition
immediate formation of a red color
Term
What enzyme catalyzes the reaction of formate to CO2 and H2?
Definition
formic hydrogenase
Term
What organisms can be distinguished with the MR test?
Definition
enteric organisms
Term
3 characteristics of the MR test
Definition
large amounts of lactic acid, succinic and acetic acid are produced :: a small quantity of ethanol is produced :: a relatively small amount of gas is prodcued from formic dehydrogenase
Term
The acid:alcohol ratio in the MR test is relatively ___.
Definition
Large
Term
What does the VP test detect?
Definition
presence of acetoin
Term
How are the results of the VP test interpreted?
Definition
Red color = positive result
Term
2 characteristics of the VP test
Definition
Alcohols produced in larger amounts than acids because of butanediol production :: a large amount of gas is produced
Term
What does the Cyt C oxidase test detect?
Definition
The presence of Cyt c in the electron transport chain.
Term
What medium is used in the oxidase test?
Definition
TSA plates
Term
What dye is used in the oxidase test and why?
Definition
p-phenylenediamine dihydrochloride - forms dark blue color if cyt c is present
Term
How are the results of the oxidase test interpreted?
Definition
Pos - color change w/in first 30 sec
Term
What are cytochromes?
Definition
hemoproteins transferring electrons to electron acceptors such as oxygen
Term
What is detected in the catalase test?
Definition
Catalase - apparent when hydrogen peroxide is converted to H2O and O2 (bubbles)
Term
What reaction does superoxide dismutase catalyze?
Definition
O2 + H2O --> H2O2
Term
What reaction does catalase catalyze?
Definition
H2O2 --> H2O + O2
Term
Which 3 general types of organisms are able to produce catalase?
Definition
aerobes, facultative anaerobes and microaerophiles
Term
What medium is used for the catalase test?
Definition
TSA plates
Term
What reagent is used in the catalase test?
Definition
H2O2
Term
How are the results of the catalase test interpreted?
Definition
bubbling = pos
Term
What 2 things does the urease test detect?
Definition
Breakdown of urea into ammonium and CO2
Term
What indicator is used for the urease test?
Definition
phenol red
Term
What medium is used for the urease test?
Definition
Stuart medium
Term
How are the results of the urease test interpreted?
Definition
Change from peachy to hot pink = pos
Term
What 2 things does the cysteine desulferase test detect?
Definition
hydrogen disulfide production :: iron sulfide
Term
The cysteine desulferase test involves breakdown of what amino acid?
Definition
cysteine
Term
A positive result of the cysteine desulfurase tes is indicated by the present of a dark precipitate called ____. What 2 substrates react to form this?
Definition
Ferrous sulfide :: hydrogen sulfide and ferrous sulfate
Term
what medium is used for the cysteine desulferase test?
Definition
KIA slants
Term
How are the results of the cysteine desulferase test interpreted?
Definition
a dark precipitate = pos for H2S production
Term
What 4 tests utilize a pH indicator?
Definition
urease :: VP :: Citrate :: ??
Term
2NH2 + CO --> 2NH4 + CO :: this reaction is catalyzed by?
Definition
urease
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