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MICRO EXAM #2b
na
40
Microbiology
Undergraduate 3
06/14/2015

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Cards

Term
What is potential energy?
Definition
-stored energy
-water behind a dam
Term
What is kinetic energy?
Definition
-energy of motion
-free energy available to do work
-movement of water from behind a dam
Term
What is catabolism?
Definition
-biodegradation

-energy-releasing processes

-breakdown of compounds in order to produce ATP
Term
What is anabolism?
Definition
-biosynthesis

-energy-consuming processes

-utilize stored energy to synthesize macromolecules
Term
What are the 3 types of metabolic pathways?
Definition
-linear

-branched

-cyclical
Term
Is ATP formed or used in catabolism/anabolism?
Definition
-ATP are made in catabolism

-ATP are used in anabolism
Term
What are the characteristics and functions of enzymes?
Definition
-enzymes are biologically active proteins
-produced from genes w/in DNA
-are catalysts
-can be recycled
-end in "-ase"
Term
How do enzymes speed up chemical reactions?
Definition
they lower the activation energy

-strain on the bond lowers activation energy
Term
What is induced fit?
Definition
enzymes bind their substrates at the active site

-active site molded to fit substrate

-lock & key shape
Term
What factors can affect enzyme activity?
Definition
-temperature

-pH

-salt concentration (low)
Term
What are coenzymes?
Definition
non-protein, organic/inorganic compounds

(tend to be small molecules)
Term
What are cofactors?
Definition
-organic
-come & go
-carry/shuttle ATP
Term
What are the 2 types of enzyme inhibition?
Definition

Competitive

-blocks correct substrate from binding

-usually permanent

 

Noncompetitive/allosteric

-inhibitor binds to allosteric site

-changes shape & temp. prevents substrate from binding

-indirectly block active site

Term
What is feedback inhibition?
Definition

a form of allosteric inhibition 

 

-when end product binds to active site of 1st enzyme in a pathway

-allows pathways to self-regulate

Term
Why is ATP a high-energy molecule?
Definition

-fuels enzymatic reactions

-energy currency of the cell 

-energy is stored in the chemical bonds between the      phosphate groups

-energy to produce ATP comes from catabolic metabolism of organic molecules

Term
What is oxidation?
Definition

the loss of electrons, release energy

 

(LEO)

Term
What is reduction?
Definition

the gain of electrons, gain energy

 

(GER)

Term
What are the 2 primary electron carriers and what is their job?
Definition

NAD+ (oxidized)

NADH  (reduced) 

 

FAD (oxidized)

FADH2 (reduced)

 

-they are electron "taxis"

Term
What are precursor metabolites?
Definition

intermediate products produced in catabolic pathways that are used in anabolic pathways

 

-serve as carbon skeleton for building macromolecules

Term
What is glycolysis?
Definition

-10 step oxidation of glucose into 2 pyruvate

 

-generates ATP & NADH

    -net gain of 2 ATP (sub. level phosph.)

    -net gain of 2 NADH (from redox rxns)

 

-produces 6 different precursor metabolites

 

-functions with or without oxygen

Term
What happens in the preparatory stage of glycolysis?
Definition
  • 2 ATP used 
  • glucose split into two 3-carbon molecules  (PGAL & DHAP)
Term
What happens in the pay-off stage of glycolysis?
Definition
  • 4 ATP produced (sub. level phosphorylation)
  • 2 NADH produced
  • 2 PGAL oxidized to 2 pyruvic acid
Term
What is substrate phosphorylation?
Definition
ATP using chemical energy to add phosphate ion to ADP
Term
How does the Pentose Phosphate Pathway (PPP) contribute to glycolysis?
Definition
  • aids glycolysis in brekdown of glucose
  • converts 6-carbon sugars to 5-carbon sugars
  • yields PGAL to enter into glycolysis
  • major contributor to biosynthesis (anabolism)
  •     produces reducing power = NADPH
  •     produces 2 vital precursor metabolites
  • functions with or without oxygen
  • end @ pay-off stage of glycolysis
Term
Wht is formed in the transition step?
Definition
  • 2 NADH per glucose are produced
  • pyruvic acid (from glycolysis) is oxidized & decarboxylated into Acetyl Co-A
Term
What is formed, per glucose, in the Krebs cycle? Are there precursor metabolites?
Definition
  • 6 NADH
  • 2FADH2
  • 2 ATP

Yes

Term
What is the Electron Transport Chain?
Definition
a series of membrane-bound carrier molecules that are oxidized and reduced as e- are passed down the chain to terminal e- acceptor
Term
Where is the ETC located in bacterial cells?
Definition
cytoplasmic membrane
Term
What is a Proton Motive Force?
Definition

Protons (H+) are pumped from inside the cell to the outside as e- are passed

 

  • creates H+ concentration gradient
  • used by ATP synthase to generate ATP (chemiosmosis)
Term
What is aerobic respiration?
Definition
final electron acceptor in ETC is molecular O2
Term
What is anaerobic respiration?
Definition

final electron acceptor in ETC is NOT O2

 

-yields less energy than aerobic resp.

Term
What is ATP Synthase and what fuels it?
Definition

creates ATP by transporting H+ back into the cell (Proton Motor vis Chemiosmosis)

  • ADP + Pi -> ATP
  • 3 protons (H+) to make 1 ATP
  • 1 NADH = 3 ATP
  • 1 FADH2 = 2 ATP
Term

How much ATP is produced from one glucose molecule through both substrate-level phosphorylation and oxidative  phosphorylation?

Definition

AEROBIC

 Glycolysis = 2 ATP (sp)

 TCA Cycle = 2 ATP (sp)

 ETC          = 34 ATP (ox. phos.)

 Total = 38 ATP


ANAEROBIC

 Glycolysis              = 2 ATP (sp)

 Partial TCA & ETC   = 30 ATP (ox. phos.)

 Total = 32 ATP

Term
Why do organisms use fermentation?
Definition
  • used by organisms that cannot respire
  • ATP (2) is produced only in glycolysis
Term
What is the substitute terminal electron acceptor of fermentation?
Definition
pyruvate or another organic molecule
Term
What group/type of enzymes are necessary for breaking down macromolecules?
Definition
Hydrolytic enzymes
Term
What is photosynthesis?
Definition
harvesting energy from sunlight to make ATP and sugar; and fix CO2
Term
Chemolithotrophs
Definition
utilize inorganic compounds as energy source for ETC
Term
What purpose do anabolic pathways serve and what are their substrates?
Definition
they synthesize macromolecules
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