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Micro Chapter 16 & 19
Nester Chapter 16 & 19
168
Biology
Undergraduate 2
03/01/2014

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Term
endotoxin
Definition
Lipopolysaccharide component of outer membrane of gram negative bacteria
Term
what is responsible for toxic properties of LPS
Definition
lipid A
Term
exotoxin
Definition
toxic protein produced by a microorganism (toxin)
Term
opportunistic pathogen
Definition
microbe that causes disease only when introduced into an unusual location or into an immunocompromised host
Term
primary pathogen
Definition
microbe or virus able to cause disease in an otherwise healthy individual
Term
virulence factors
Definition
traits of a microbe that promote pathogenicity
Term
symbiosis
Definition
living together
Term
3 types of symbiosis
Definition
mutualism, commensalism, parasitism
Term
mutualism
Definition
both partners benefit
Term
ex of mutualism
Definition
bacteria synthesize vitamin K and B vites
Term
commensalism
Definition
one partner benefits, other unharmed
Term
ex of commensalism
Definition
microbes living on skin
Term
parasitism
Definition
one organism benefits at the expense of the other
Term
ex of parasitism
Definition
all pathogens are parasites, but typically means eukaryotic pathogens such as protozoa and helminths
Term
normal microbiota
Definition
population of microorganisms routinely found growing on body of healthy individuals
Term
occupy for extended periods
Definition
resident microbiota (compared to transient)
Term
how do normal microbiota exclude pathogens
Definition
covering binding sites, consuming nutrients, producing toxic compounds
Term
examples of inhibiting good microbiota
Definition
Lactobacillus species suppress growth of yeast Candida albicans, Clostridium difficile can overgrow when normal intestinal microbiota killed
Term
hygiene hypothesis
Definition
insufficient exposure to microbes can lead to allergies
Term
hygiene hypothesis - how
Definition
early and consistent exposure to microbes in the gut stimulates regulatory T cells, preventing immune system over response
Term
human fetus sterile until when
Definition
amniotic membrane ruptures just before birth
Term
intestinal microbiota of obese includes
Definition
Firmicutes ( inc Clostridium, Bacillus species)
Term
intestinal microbiota of obese includes
Definition
Bacteroidetes
Term
infection is a
Definition
colonization of a parasitic microbe
Term
does infection always lead to illness
Definition
no - can be subclinical
Term
symptoms
Definition
subjective effects of the disease, as experienced by the patient (nausea, pain)
Term
signs
Definition
objective evidence (rash, swelling)
Term
ex of diseases caused by primary pathogen
Definition
plague, malaria, measles, influenza
Term
ex of opportunistic pathogen
Definition
Pseudomonas, typically harmless, except Cystic fibrosis & burn patients can be fatal
Term
infectious dose
Definition
number of microbes necessary to establish an infection (ID50 = number of cells that result in disease in 50% of people)
Term
ex of highly infectious
Definition
Shigella - only 10-100 cells
Term
ex of not highly infectious
Definition
Salmonella - need 10^6 cells
Term
latent infection re-emerging example
Definition
shingles re-emerges in life after varicella-zoster acute infection (chicken pox)
Term
localized infection example
Definition
Staphylococcus aureus boil
Term
systemic infection example
Definition
measles
Term
bacteremia
Definition
bacteria are circulating in blood stream (not necessarily disease state)
Term
toxemia
Definition
toxins circulating in blood stream
Term
viremia
Definition
viral particles circulating in blood stream
Term
Koch's postulates
Definition
microorganisms must be present in every case of disease
Term
Koch's postulates
Definition
organism must be grown in pure culture from diseased hosts
Term
Koch's postulates
Definition
same disease must be produced when pure culture is introduced into susceptible hosts
Term
Koch's postulates
Definition
organism must be recovered from experimentally infected hosts
Term
which microbe cannot be grown in laboratory medium
Definition
Treponema pallidum - causes syphillis
Term
what organisms are molecular Koch's postulates particularly relevant for
Definition
pathogens E. coli & streptococcus pyogenes
Term
balanced pathogenicity
Definition
pathogen less virulent while host becomes less susceptible - otherwise will kill off host
Term
adhesins
Definition
at tips of pili, attach to host cells
Term
receptor
Definition
molecule to which adhesin attaches, typically help protect host cells from damage, are glycoproteins
Term
what portion of receptor does adhesin bind to
Definition
sugar portion
Term
example of adhesin/receptor systems
Definition
adhesin of E. coli adhere to receptor on large intestine
Term
siderophores
Definition
iron binding molecules produced by pathogens
Term
Secretory IgA antibodies do what
Definition
protects mucosal surfaces
Term
pathogen mechanisms to thwart IgA antibodies
Definition
rapid turnover of pili, antigenic variation, IgA proteases
Term
type III secretion system
Definition
(injectisome) - syringelike structure that injects protein into Eurkaryotic cells
Term
damage due to infection can be direct or indirect, examples
Definition
toxins produced - direct, immune response - indirect
Term
ex where damage done helps organism exit the host
Definition
Vibrio cholerae - causes cholera, 20 Liters of watery microbe containing fluid
Term
another ex
Definition
Bordatella pertussis - whooping caugh, coughs propel pathogens into air
Term
exotoxins
Definition
pathogens produce specific negative effects
Term
toxoids
Definition
inactivated toxins
Term
ex of toxoid vaccinations
Definition
tetanus, diphtheria
Term
antitoxin
Definition
suspension of neutralizing antibodies, to treat a toxin-mediated disease
Term
cytotoxins
Definition
damage a variety of cell types by interfering with cellular mechanisms or lysing cells
Term
A-B toxins
Definition
A (enzyme) responsible for toxin effects, B indicates target cell
Term
hemolysins
Definition
cause hemolysis on blood agar
Term
membrane damaging toxins
Definition
cytotoxins that disrupt plasma membranes, causing cell to lyse
Term
superantigens
Definition
override specificity of helper T-cell response, causing toxic effects due to massive release of cytokines by helper T cells
Term
examples of superantigens
Definition
TSSToxin, S. aureas, S. pyogenes
Term
exfoliatin
Definition
destroys material that binds together layers of skin (scalded skin syndrome) allowing toxin to spread
Term
septic shock
Definition
inflammation occurs throughout body, leakage of fluid from blood vessels and widespread activation of coagulation cascade
Term
septic shock causes
Definition
drop in blood pressure, disseminated intravascular coagulation (DIC), fever
Term
autoclave effect on endotoxin
Definition
none, heat stable
Term
how to verify IV fluids not contaminated with endotoxin
Definition
LAL assay done, uses proteins extracted from horseshoe crab blood, forms gel-like clot when exposed to endotoxin
Term
what else can cause symptoms similar to endotoxins
Definition
peptidoglycan and other bact. Cell wall components
Term
2 damaging effects of adaptive immune response
Definition
immune complexes, cross-reactive antibodies
Term
Clostridium botulinum
Definition
botulism - flaccid paralysis, prevents release of acetylcholine
Term
Clostridium tetani
Definition
tetanus - spastic paralysis, prevents release of neurotransmitters
Term
Enterotoxigenic E. coli
Definition
severe watery diarrhea - modifies regulatory protein in intestinal cells, cont. secrete electrolytes & water
Term
Vibrio cholerae
Definition
cholera - severe watery diarrhea
Term
Bacillus anthracis
Definition
anthrax - septic shock inhaled, skin lesions cutaneous, causes accumulation of fluid
Term
Bordetella pertusis
Definition
whooping cough - causes accumulation of respiratory secretions & mucus
Term
Corynebacterium diphtheriae
Definition
diphtheria - pseudomembrane in throat, heart/nervous system/kidney damage
Term
E. coli O157:H7
Definition
bloody diarrhea, kidney damage halts protein synthesis
Term
Shigella dysenteriae
Definition
blood, pus, mucousy diarrhea, kidney damage, halts protein synthesis
Term
Clostridium perfringens
Definition
Gas gangrene - extensive tissue damage, removes polar head of phospholipids in membrane
Term
Staphylococcus aureus
Definition
wound/other infections - accumulation of pus, forms pores allows fluids to enter cells
Term
Streptococcus pyogenes
Definition
pharyngitis/other infections - accumulation of pus, forms pores allows fluids to enter
Term
Staphylococcus aureus - certain strains
Definition
superantigen - food borne intoxication, nausea vomiting
Term
TSST
Definition
toxic shock syndrome - (SA) staphylococcal, sytemic toxic effects, fever, vomiting, diarrhea, aches, rash low BP
Term
Streptococcal toxic shock
Definition
(SA) streptococcal pyrogenic exotoxins (SPE) - fever, vomiting, diarrhea, aches, rash low BP
Term
scalded skin syndrome
Definition
staphylococcus aureus, separation of outer layer of skin, breaks ester bonds
Term
exotoxin bacterial source
Definition
gram-positive & negative
Term
endotoxin bacterial source
Definition
gram-negative only
Term
location in the bacterium - endo, exotoxin
Definition
exo - synthesized in cytoplasm, endo - part of outer membrane
Term
chemical nature - endo vs exo toxin
Definition
endo is LPS - lipid A component, exo is protein
Term
ability to form toxoid - endo vs exo
Definition
exo no, endo yes
Term
heat stability endo vs exo
Definition
exo - inactivated by heat, endo heat stable
Term
mechanism - endo vs exo toxin
Definition
exo - distinct toxic mechanism for each, endo - innate immune response
Term
toxicity - exo vs endo
Definition
exo - very potent, among most potent known, endo - small amounts can be localized only and cleared appropriately, systemic can be deadly
Term
epidemiology
Definition
study of disease patterns in populations
Term
ex of non communicable disease
Definition
tetanus - Costridium tetani enters host from environment, not another host
Term
attack rate
Definition
percentage of people who become ill in a population after exposure to an infectious agent
Term
incidence
Definition
numer of new cases in a specific time period
Term
prevalence
Definition
total number of cases at any time (both old and new)
Term
morbidity
Definition
incidence of disease in a population at risk
Term
mortality
Definition
overall death rate in a population
Term
case fatality rate
Definition
percentage of a population that dies from a specific disease
Term
as case fatality rate decreases
Definition
prevalence typically increases because more people survive
Term
endemic diseases
Definition
constantly present in a given population (like colds), cases are sporadic
Term
epidemic
Definition
unusually large number of cases in a population (cholera in western hemisphere)
Term
outbreak
Definition
cluster of cases occurring during a brief time interval and affecting a specific population, may occur at onset of epidemic
Term
pandemic
Definition
an epidemic has spread world wide (like aids)
Term
reservoir of infection
Definition
natural habitat for pathogen, may be on animal or in soil or water
Term
Yersinia pestis - causes what, reservoir where
Definition
causes plague, reservoirs are rats, mice, prairie dogs (vector is fleas)
Term
ex where humans are only reservoir, easier to control
Definition
smallpox, eradicated by vaccination (could not hide anywhere else)
Term
example of asymptomatic infections causing spread
Definition
STI's - 50% of women no symptoms from Neisseria gonorrhoeae, but transmit
Term
ex of skin colonizations & carriers
Definition
Staphylococcus aureus - may not have illness, but serve as carriers to others
Term
2 ex. Of non human reservoirs
Definition
poultry - Campylobacter, Salmonella, raccoons/skunks/bats rabies virus
Term
diseases that can be transmitted to humans but primarily exist in other species
Definition
zoonotic diseases (zoonoses), typically more severe in humans because there has been no evolution towards balanced pathongenicity
Term
2 pathogens with environmental reservoirs & where
Definition
Clostridium botulinum, Clostridium tetani - in soilds….difficult to eliminate
Term
portal of exit
Definition
body orifice or surface from which a microbe is shed
Term
portal of entry
Definition
where pathogen enters the host
Term
ex of pathogen only infects if enters certain portal
Definition
Enterococcus faecalis causes bladder infection in urinary tract, nothing in large intestine (is normal microbiota there)
Term
horizontal transmisssion
Definition
transmission of pathogen from one organism to another, not from mother child (vertical)
Term
ex of microbes which die quickly when exposed to dry, cold environment, require sexual contact
Definition
Treponema pallidum (syphillis), Neisseria gonorrhoeae (gonorrhea)
Term
indirect contact
Definition
transfer of pathogens via inanimate objects (fomites)
Term
droplet transmission
Definition
large microbe-laden respiratory droplets, inhaled
Term
droplet transmission - direct or indirect?
Definition
considered direct contact
Term
distances desks, beds should be in barracks to avoid droplet transmission
Definition
1.5-3 meters apart
Term
cross contamination
Definition
pathogens from one food transferred to another
Term
waterborn disease outbreak in 1993
Definition
Cryptosporidium parvum (intestinal parasite) infected 400K people through water supply in Milwaukee
Term
size of particles typically trapped in mucus of nose & throat (vs to lungs)
Definition
10 micrometers and greater
Term
droplet nuclei
Definition
smaller respiratory droplets - dried droplets that can remain suspended in air currents
Term
vector
Definition
any living organism that can carry a disease-causing microbe - can carry externally or internally
Term
flies with E. coli or Shigella on legs
Definition
mechanical vector
Term
ex of biological vectors
Definition
malaria, plague, lyme disease - carry microbe internally
Term
prevent of vector borne diseases relies largely on control of
Definition
arthropods
Term
virulence factors
Definition
increase ability to cause disease
Term
virulence factor of shigella
Definition
adhere to intestinal epithelial cells, promote their uptake
Term
virulence factor of Neisseria gonorrhoeae
Definition
binds to mucosal epithelial cells
Term
virulence factor of Streptococcus pneumoniae
Definition
capsules protect from phagocytosis
Term
virulence factor of mycobacterium tuberculosis
Definition
can survive within macrophages
Term
virulence factor of E. coli O157:H7
Definition
produces cytotoxin that destroys cells lining blood vessels
Term
virulence factor of Clostridium perfringens
Definition
destroys host cell membranes with phospholipase
Term
is immunity ever absolute?
Definition
no - an unusually large exposure to a pathogen can cause disease in a person who is otherwise immune or vaccinate (lab accident)
Term
long incubation periods have what effect on spread of disease
Definition
increase - asymptomatic but spreading (ex typhoid fever in Switzerland)
Term
herd immunity
Definition
when 90% of population are immune, disease is unlikely to spread - protects non-immune individuals
Term
who are generally more susceptible to infectious agents
Definition
very young, elderly - immune systems not developed, and immunity wanes over time and eldlerly more likely to not have updated immunizations
Term
meningitis young children particularly susceptible to
Definition
Haemophilus influenzae (Hib vaccine)
Term
gender influence on disease distribution
Definition
women more likely to develop UTI's because urethra shorter (and opening close to feces)
Term
example of cooperative surveillance efforts coupled with global immunization programs eradicating disease
Definition
small pox
Term
CDC part of
Definition
US Dept of Health & Human Services
Term
World Health Organization functions
Definition
provide guidance in field of health, set global standards for health, strengthen national health programs, develop & transfer technology
Term
what does MMWR stand for & where is it
Definition
Morbidity & Mortality Weekly Report, on CDC's website
Term
small pox case fatality rate
Definition
25% - and disfigured survivors
Term
emerging infectious diseases
Definition
are novel or recently increased in incidence
Term
examples of EID
Definition
SARS, mad cow, avian flu….also re-emerging such as malaria, TB
Term
healthcare associated infections (HAI)
Definition
infections acquired while receiving treatment - one of top 10 causes of death in US
Term
hospital acquired infections
Definition
nosocomial infections - greek word for hospital, 5-10% admitted acquire one
Term
do nosocomial infections always originate from outside body
Definition
no - many originate from patients own microbiota
Term
highest percentage of nosocomail infections
Definition
urinary tract (32%), surgical site (22%)….
Term
what killed more people hospital acquired MRSA or AIDS
Definition
mrsa
Term
what thrives in healthcare sinks, respirators, toilets
Definition
Pseudomonas aeruginosa - opportunistic gram negative rod, only needs water
Term
personnel issues - carriers of what threat why
Definition
Staphylococcus aureus, Streptococcus pyogenes - due to access to surgical sites
Term
how does patient microbiota cause HCI
Definition
transmit organisms to otherwise sterile sites - ex S. epidermidis to veins from skin
Term
immunocompromised patients with HCI
Definition
latent infections activated during suppression of immune system (chemotherapy)
Term
why are UTI most common type of nosocomial infection, what causes
Definition
catheterization of bladder - introdues foreign microbes, urine is a good growth medium
Term
length needed for surgical scrubbing, nursery, ICU or isolation unit
Definition
10 minutes
Term
how is airflow in hospital rooms typically pressurized
Definition
slight pressure - flows out to keep contaminated corridor air out
Term
when negative pressure rooms used
Definition
when patient is infectious - to keep their air from flowing out (sucks in)
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