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micro and infectious diseases
exam 1-chapter 1-6
137
Biology
Undergraduate 4
01/22/2013

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Term
define microbiology
Definition
the study of organisms of microscopic size
Term
6 characteristics of prokaryotes
Definition
1. smaller than eukaryotes
2. 1 circular chromosome
3. no nuclear membrane
4. peptidoglycan wall
5. no organelles
6. small ribosomes
Term
6 characteristics of eukaryotes
Definition
1. bigger than prokaryotes
2. multiple chromosomes
3. nuclear membrane
4. no peptidoglycan
5. organelles
6. big ribosomes
Term
5 types of microbes
Definition
1. bacteria
2. algae
3. fungi
4. protozoa
5. viruses
Term
4 characteristics of bacteria
Definition
1. prokaryotic
2. single celled
3. microscopic
4. widely distributed in nature
Term
5 characteristics of algae
Definition
1. both prokaryotic and eukaryotic
2. can be microscopic and macroscopic
3. perform photosynthesis
4. can be single celled or multicellular
5. do not cause infections
Term
4 characteristics of fungi
Definition
1. eukaryotic
2. micro and macroscopic
3. rigid cell wall, like plants
4. can be single celled or multicellular
Term
3 characteristics of protozoa
Definition
1. eukaryotic
2. single celled
3. no cell wall
Term
2 characteristics of viruses
Definition
1. no independent metabolism
2. replicate only inside living cells
Term
antonie van leeuwenhoak
Definition
first to observe microorganisms in 1674
Term
edward jenner
Definition
first use of vaccine against infectious disease
Term
ignaz semmelweis
Definition
first infection control investigator
Term
louis pasteur-5 discoveries
Definition
1. germ theory of disease
2. changed hospital and patient care infection control practices
3. invented process of pastueurization
4. discovered vaccines
5. discovered rabies
Term
robert koch
Definition
first to use agar plates and stains. discovered anthrax and tuberculosis
Term
alexander fleming
Definition
invented penicillin
Term
bacterial cell shape coccus
Definition
spherical
Term
bacterial cell shape bacillus
Definition
rod-shaped
Term
bacterial cell shape spirillium
Definition
spiral shaped
Term
binary fission
Definition
bacterial replication. one cell splits in half to two identical cells
Term
diplococci
Definition
cocci that divide once along one plane and form pairs
Term
streptococci
Definition
cocci that repeatedly divide in one plane and form chains
Term
staphylococci
Definition
cocci that divide along more than one plane and form clusters
Term
bacilli aggregate shape
Definition
form chains end to end
Term
bacilli palisade formation
Definition
line up parallel to each other
Term
bacteria enclosure(2)
Definition
cell wall and membrane
Term
bacteria movement(1)
Definition
flagella
Term
bacteria attatchment(4)
Definition
pili, fimbrae, capsules, adhesins
Term
bacteria genetics(1)
Definition
bacterial chromosome
Term
bacteria metabolism(3)
Definition
ribosomes, granules, cytoplasm
Term
bacteria survival(1)
Definition
endospores
Term
gram positive cell wall
Definition
thick, rigid walls, can have other proteins and carbs on outside of wall extending out to environment
Term
gram negative cell wall
Definition
located in periplasm where enzymatic rxns take place. thin, flexible wall. have 2 membranes- outer membrane outside cell wall, inner membrane inside cell wall.
Term
bacterial cell wall functions(3)
Definition
1. protect cell membrane(semi-permeable)
2. protect from osmotic pressure
3. anchoring place for other structures
Term
bacterial cell membrane(3)
Definition
1. lipid bilayer
2. made of glycerol phospholipids
3. semi-permeable
Term
membrane transport proteins(3)
Definition
1. use passive diffusion
2. form channels to grab molecules and pull them through membrane
3. passive transport does not require energy
Term
define magnification
Definition
power to make an object appear larger
Term
define resolution
Definition
ability to separate objects-better than magnification
Term
biological stains
Definition
simple stains and differential stains(most stains in microbiology are diff)
Term
differential stains-2 types
Definition
gram stain-distinguishes bacteria
acid fast stain-distinguishes the genus
Term
primary stain
Definition
stains everything in the cell
Term
mordant
Definition
intensifies the primary stain
Term
decolorizer
Definition
removes primary stain
Term
counterstain
Definition
shows what was decolorized
Term
4 main functions of cells
Definition
1. enclosure
2. generation and storage of energy
3. storage and replication of genetic info
4. synthesis of cell components
Term
endocytosis aka pinocytosis
Definition
membrane captures fluids and forms a vesicle(invaginates)
Term
phagocytosis
Definition
membrane surrounds a solid object and internalizes to digest it
Term
exocytosis
Definition
cell pushes a vesicle toward the membrane, fuses with it and contents are released for export
Term
internal membranes(2)
Definition
1.sites of metabolic activity
2.move and store thing inside cell
Term
endoplasmic reticulum(2)
Definition
1.hollow tubes and passages
2.ribosomes sit on membranes to make proteins
Term
golgi apparatus
Definition
sites of chemical synthesis
Term
lysosomes
Definition
vesicles containing digestive enzymes
Term
cell shape and movement(3 components)
Definition
1. cytoskeleton
2. actin protein fibers and microtubules
3. flagella allow cell to swim in fluid
Term
mitochondria(2)
Definition
1. contain enzymes
2. energy metabolism
Term
chloroplasts(2)
Definition
1. capture energy from sunlight
2. contain photosynthetic enzymes
Term
ribosomes
Definition
1. string together amino acids into proteins
2. eukaryotes-sit on endoplasmic reticulum, take amino acids from cytoplasm, form proteins inside er
Term
studying bacterial growth(4)
Definition
1. requires that we observe them in pure culture
2. can only grow .1% of all bacteria
3. a pure culture is a population derived from a single cell
4. koch-discovered use of agar
Term
streak plate method(3)
Definition
1. bacteria physically seperated-each cell will grow into a single colony
2. bacteria are spread over a semi-solid medium containing nutrients
3. agar hold nutrient fluids in gel, bacteria will grow colonies on top
Term
pour plate method(3)
Definition
1. mix the bacteria into the molten fluid
2. pour into plates
3. let it harden
Term
bacterial growth(3)
Definition
1. size is uniform within a species
2. grow in number, not size
3. when treated with antibiotics, can vary in size
Term
bacteria divide by binary fission(3)
Definition
1. cell chromosome and contents double and move apart
2. cross wall forms and breaks apart, dividing cell
3. result- 2 equally sized daughter cells
Term
direct cell plate count method(4)
Definition
1. mix cells in fluid suspension, pour onto petri plate
2. visible colony-represents one CFU-colony(cell) forming unit
3. CFU/mL calculated based on dilutions
4. more accurate
Term
measure cell mass(3)
Definition
1. measure optical density of growing bacteria in a medium with a spectrophotometer
2. proportional to the cell number within a species
3. faster method
Term
psychrophiles
Definition
cold loving
Term
mesophiles
Definition
moderate loving
Term
thermophiles
Definition
heat loving
Term
extreme thermophiles
Definition
growth above 80C
Term
toxic effects of oxygen(2 types of radicals)
Definition
1. superoxide anion(O2-)
2. hydrogen peroxide(H2O2)
Term
obligate(strict) aerobes(2)
Definition
1. require oxygen for metabolism
2. have catalase and superoxide dismutase
Term
obligate(strict) anaerobes(2)
Definition
1. do not require oxygen for metabolism
2. no detoxifying enzymes- are killed by oxygen
Term
facultative anaerobes(3)
Definition
1. can use but do not require oxygen
2. have detoxifying enzymes
3. growth is better with oxygen-respiration more efficient
Term
catalase enzyme
Definition
makes h2o out of peroxide
Term
superoxide dismutase
Definition
detoxifies superoxide
Term
microaerophilic bacteria(2)
Definition
1. need a low level of oxygen
2. small amounts of detoxifying enzymes
Term
aerotolerant bacteria(2)
Definition
1. cant use oxygen for metabolism
2. have detoxifying enzymes-growth is same with our without oxygen
Term
acidophiles
Definition
low pH(<6), human pathogens living in stomach
Term
neutrophiles
Definition
neutral pH 6-8, most human pathogens
Term
alkalinophiles
Definition
high pH(>8)
Term
how do bacteria control intracellular pH?
Definition
cytoplasm buffering and active transport of ions
Term
osmotic pressure
Definition
the solute concentration required to prevent net flow of water across the cell membrane
Term
halophiles
Definition
salt loving
Term
bacterial energy sources(2)
Definition
1. sunlight-phototrophs
2. chemicals-chemotrophs
Term
bacterial carbon sources(2)
Definition
1. atmospheric CO2-autotrophs
2. organic chemicals-heterotrophs
Term
selective medium(2)
Definition
1. contains some inhibitors of growth
2. suppresses growth of unwanted organisms
Term
differential medium
Definition
allows differentiation of microorganims by appearance on the medium
Term
enrichment medium
Definition
nutrients increase the desired microorganisms
Term
in vitro growth-lag phase
Definition
adaptation to medium, replication rate increasing, no cells dying
Term
in vitro growth-log phase
Definition
exponential growth, steady replication rate, no death
Term
in vitro growth-stationary phase
Definition
death rate equals replication rate
Term
in vitro growth-death phase
Definition
death rate outspaces replication rate
Term
sterilization
Definition
destruction of all forms of microbial life
Term
disinfection
Definition
destruction of disease causing microorganisms
Term
antisepsis
Definition
disinfection safe for use on human tissues
Term
sanitize
Definition
microbial control to public health standards
Term
decontaminate
Definition
make safte to handle, cide=kill, stat=inhibition
Term
pasteurization
Definition
heat treatment of food to prevent spoiling and kill certain microbial pathogens
Term
preservation
Definition
physical or chemical treatment of food that inhibits microbial growth and spoilage
Term
microbial death
Definition
the fewer the bacteria, the shorter time is takes to kill them
Term
microbial killing- dry heat
Definition
oxidizes(burns) cell components, hot air oven, incineration
Term
microbial killing- heat with moisture
Definition
hydrolyzes chemical bonds
Term
hydrolysis
Definition
kills much faster than oxidation
Term
positive features of heat(6)
Definition
effective, fast, cheap, easy, reliable, non toxic
Term
negative features of heat
Definition
heat or moisture may damage some products
Term
moist heat-the autoclave(3)
Definition
1. sterilizes
2. uses steam under pressure
3. for items that can get wet
Term
filtration(3)
Definition
1. cellulose filters for fluids have pores smaller than microorganisms
2. used for heat sensitive solutions
3. air filters-high efficiency particulate air
Term
alcohols
Definition
dissolves lipids, disrupts membranes, proteins
Term
halogens
Definition
oxidize proteins, iodine and chlorine
Term
phenol and phenolics
Definition
damages plasma membranes, residual activity on surfaces, powerful and long acting
Term
aldehydes
Definition
inactivates proteins and DNA, highly effective but hazardous
Term
quarternary ammonium compounds
Definition
disrupts cell membrane, general purpose low level disenfectant
Term
metals
Definition
combine with -sh groups, denature proteins, used on burns
Term
gas sterilizers(2)
Definition
1. ethylene oxide gas-denatures proteins and DNA
2. plasma sterilizers-generates superoxide radicals
Term
ionizing radiation(2)
Definition
1. destroys DNA, gamma rays, x rays
2. used for foods and some hospital supplies
Term
ultraviolet light radiation(3)
Definition
1. damages DNA
2. used for clean surfaces and biosafety cabinets
3. not very effective
Term
preservation of products(3)
Definition
1. chemicals
2. temperature
3. reduce the available water
Term
metabolic pathways(3)
Definition
1. krebs cycle
2. glycolysis
3. pentose phosphate pathway
Term
nutrients(2)
Definition
1. break down chemical bonds->release energy
2. synthesize own components
Term
metabolism
Definition
sum of all chemical reactions inside cell
Term
enyzmes(5)
Definition
1. organic catalysts-protein
2. increase rate chem rxn
3. decrease activation energy of rxn
4. chemical bond formed or broken at active site
5. lock and key-specific for each substrate
Term
coenzyme
Definition
non-protein, helps rxn
Term
enzymes made/controlled by DNA
Definition
dna>rna>proteins(enzymes)
Term
enzyme rates depend on 2 things:
Definition
1. temp
2. pH
Term
enzyme regulation(3)
Definition
1. turn enzyme on or off
2. regulatory site
3. allosteric site
Term
competitive inhibition
Definition
wrong substrate in active site
Term
anabolic rxn(2)
Definition
1. synthesize larger molecules/components from smaller ones
2. require energy-form chem bonds
Term
catabolic rxn(2)
Definition
1. take larger molecules/components and break them up
2. release energy- into chem bonds
Term
intermediary rxn
Definition
couple anabolic and catabolic rxns to transfer energy
Term
energy components(2)
Definition
-stored and transferred in chemical bonds
1. ATP-2 breakable phosphate bonds
2. NAD/NADP-stores/releases hydrogen atoms
Term
define reduction
Definition
adding H-requires energy
Term
define oxidation
Definition
removing H-releases energy
Term
anabolic pathway(3)
Definition
1. synthesize large molecules from smaller ones
2. add H
3. require energy
Term
catabolic pathway(3)
Definition
1. break up large molecules into smaller ones
2. remove H
3. release energy
Term
central metabolic pathways(3)
Definition
1. sugar for carbs
2. amino acids for proteins
3. nucleic acids for RNA and DNA
Term
glycolysis
Definition
most common: glucose->6-c sugar C6H12O6-> 2 3C pyruvate-> 2ATP, 2NADH per glucose
Term
fermentation
Definition
anaerobic: pyruvate-> lactic acid or acetaldehyde
Term
krebs cycle
Definition
aka respiration: glycolysis-> pyruvate-> 3CO2+H2O-> 15ATP
Term
pentose phosphate pathway
Definition
alternative to glycolysis: only 2ATP
makes 4C molecules and 5C ribose for RNA and DNA
Term
photosynthesis(4)
Definition
1. uses chlorophyll
2. captures light energy
3. aka calvin cycle
4. opposite of respiration
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