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Medicinal Chemistry (medchem)
metabolism reactions: phase 1, Factors affecting metabolism. korlipara final
44
Medical
Graduate
03/06/2012

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Cards

Term
Factors Affecting Metabolism in Newborns
Definition

newborns have poor glucuronating ability due to a deficiency in UDP glucuronyl transferase, the enzyme that transfers activated UDPGA 

this leads to hyperbilirubinemia and gray baby syndrome (inability to conjugate chloramphenicol)

 

 

 

Term

chloramphenicol

 

Definition
inability to conjugate leads to gray baby syndrome and accumulation of toxic levels of the drug.
Term
Phenytoin
Definition
undergoes hydroxylation. metabolite differs in dogs and human
Term

cats lack:

 

Definition
glucuronyl transferase
Term
pigs laack
Definition
sulfotransferase
Term
ornithine
Definition
used by birds in amino acid conjugation, rather than glycine and glutamine used by humans
Term

effect of genetic factors on phase 1 reactions

 

Definition
differences in genitically controlled cyp isoforms
Term

genetic factors effecting phase 2 reactions

 

Definition
differences in levels of TRANSFERASE enzymes
Term
which phase 2 reaction shows a bimodal distribution in humans?
Definition
acetylation
Term

there is genetic polymorphisms with which Cyp enzymes?

 

Definition

CYP2C9

CYP2C19

CYP2D6

CYP2A6

HOW TO REMEMBER: THEY ALL START WITH CYP2. THE FIRST TWO ARE C 9 &19.. SO REMEMBER 9. THE NEXT TWO ARE D6 AND A6 SO REMEMBER 6

Term
toltaridine.. how is it metabolized in different individuals?
Definition
some individuals have half life of 2 hrs, some have a half life of 9 hours
Term

which two animal species show no gender based differences in metabolism?

 

Definition
rabbits and guniea pigs
Term

male rats vs female rats metabolism

 

Definition
male rats metabolize at a faster rate
Term
enzyme induction. what is the result?
Definition
decrease in the duration of drugs. (because the enzymes are metabolizing faster bc they are induced)
Term

enzyme inducers examples

induction leads to decrease in duration of action of drugs because the enzymes are metabolizing faster. 

 

Definition

phenobarbital

carbamazepine

polycyclic aromatic hydrocarbons (PAH)

polychlorinated biphenyls (pcb)

environmental contaminents

cigarette smoke

dietary substances 

Term

enzyme inhibitors

increase duratoin of action of drugs and lead to side effects bc of drug accumulation


Definition

some drugs and xenobiotics

grapefruit

substrate compitition 

inactivation of drug metabolizing enzymes

phenylbutazone inhibits metabolism of warfarin

dicoumerol, chloramphenical, phenylbutazone inhibit metabolism of tolbutamide leading to hyperglycemia. 


Term
warfarin's metabolism is inhibited by
Definition
phenylbutazone
Term
functional groups capable of conjugation
Definition
-OH, -NH2, -COOH, -SH
Term

N-dealkylation


Definition

substrate: secondary and tertiary amines

mechanism: alkyl group attached to N is removed, making secondary amine primary, and tertiary amine secondary. 

byproduct: CH2O (corresponding aldehyde, which includes the O inserted by CYP450)

example: Methamphetamine (secondary amine) -> Amphetamine (primary amine)... think of it as the same molecule with the "meth" for methyl group removed.

 

Term

substrate: secondary and tertiary amines

mechanism: alkyl group attached to N is removed, making secondary amine primary, and tertiary amine secondary. 

byproduct: CH2O (corresponding aldehyde, which includes the O inserted by CYP450)

example: Methamphetamine (secondary amine) -> Amphetamine (primary amine)... think of it as the same molecule with the "meth" for methyl group removed.

Definition
Oxidative N Dealkylation
Term
what atoms are most susceptible to dealkylation?
Definition

it usually happnes in the smallest alkyl group. (removal of it)

tertiary amines go through the reaction faster than secondary because of lipid solubility. 

this is because primary and secondary more polar molecules don't pass the membrane and reach the receptor as easily. 

Term
Oxidative Deamination
Definition

substrate: primary and secondary amines where Alpha carbon can undergo hydroxylation

mechanism: CYP450 inserts O between C &H atom, unstable carbonylamide intermediate

Prodcts: corresponding ketone and amino group

example: amphetamine -> phenylacetone + ammonium

alpha carbon of amphetamine loses its amino group and it is replaced with a C=O

 

 

 

Term

substrate: primary and secondary amines where Alpha carbon can undergo hydroxylation

mechanism: CYP450 inserts O between C &H atom, unstable carbonylamide intermediate

Prodcts: corresponding ketone and amino group

example: amphetamine -> phenylacetone + ammonium

alpha carbon of amphetamine loses its amino group and it is replaced with a C=O

Definition
oxidative deamination
Term
Hydroxylation Reactions
Definition

-Replacement of an H with an insertion of O

 

phase 1 hydroxylation reactions:

oxidative deamination (alpha carbon's H is replaced with a carbonyl bond, and the amine group cleaves off)

N-Hydroxylation:(in amine molecules without alha carbon. O is inserted between N&H, so H becomes OH.)

Hydroxylation of aromatic systems: (O inserted making an epoxide out of a double bond, which undergoes rearrangement... ultimately replaces H with -OH. 

Term
N hydroxylation
Definition

substrate: primary and secondary amines that dont have an alpha carbon with a free H. (therefore can't undergo N dealkylation)

mechanism: O is inserted between N and H. H becomes OH group.


Term

substrate: primary and secondary amines that dont have an alpha carbon with a free H. (therefore can't undergo N dealkylation)

mechanism: O is inserted between N and H. H becomes OH group.

Definition
N Hydroxylation
Term
Methamphetamine
Definition

starts off as secondary amine, oxidized twice. 

1. oxidative N-dealkylation removes the methyl group on N producing Amphetamine, a primary amine. this metabolite is still active

2.Oxidative Deamination (insertion of =O on alpha carbon,    amine group leaves to produce inactive metabolite phenyl acetone (and ammonium as byproduct)

Term

O-dealkylation

 

Definition

 

ex: phenacetin to acetaminophen

substrate: ether (C-O-R)

Product: product: alcohol and corresponding aldehyde

mechanism: OH is added to the alpha carbon, the entire alkyl (R) group cleaves off and has a newly =O attached.

Term


ex: phenacetin to acetaminophen

substrate: ether (C-O-R)

Product: product: alcohol and corresponding aldehyde

mechanism: OH is added to the alpha carbon, the entire alkyl (R) group cleaves off and has a newly =O attached.

Definition
O-dealkylation
Term
S-Dealkylation
Definition

similar to O & N dealkylation. 

since few drugs contain S-alkyl groups, this reaction is uncommon

Term

oxidation of thioesters (R-S-R) (aromatic and aliphatic)

 

Definition

substrate: R-S-R (sulfide/thioether)

oxidated twice. 

first into a sulfoxide (=O attached to S)

then into a Sulfone (two =O groups attached to S)

Term
Oxidative Desulfurization
Definition

substrate: Thiocarbonyls (S=C) and thiophosphates (S=P)

 

mechanism: O is added between S=P, opening the bond up into what looks like S-P-O epoxide intermediate. 

 

the intermediate is unstable and it collapses, losing S and generating a double bond between P and O. 

 

S=P -> O=P

Parathione -> Paraoxon

Term

substrate: Thiocarbonyls (S=C) and thiophosphates (S=P)

 

mechanism: O is added between S=P, opening the bond up into what looks like S-P-O epoxide intermediate. 

 

the intermediate is unstable and it collapses, losing S and generating a double bond between P and O. 

 

S=P -> O=P

Parathione -> Paraoxon

Definition
Oxidative Desulfurization
Term
N hydroxylation
Definition

substrate: primary and secondary amines with no free H on alpha carbon

product: N-Hydroxyl intermediate

 

N-H --> N-OH

Term
hydroxylation of aromatic systems
Definition

substrate: aromatic system

produces arene oxide intermediate which is very unstable. 

mechanism: O is added between 2 C's on the ring, and an epoxide is formed. spontaneous rearrangement via NIH shift results in an arenole: the aromatic compound with -OH group attached

Term
Reaction pathways for Arene Oxides (epoxide detoxification)
Definition

1. spontaneous rearrangement & NIH shift resulting in arenol. this is most common pathway

2.glutathione conjugation to produce glutathione adduct

3. the epoxide (highly electrophilic) attaches to nucleophiles in the body's macromolecular adduct .. like DNA , RNA and protein.  this is what we dont want to happen
 

4. arene oxide + H2O --> trans di hydrodiol --(DHD Dehydrogenase)--> catechol metabolite

  • addition of water opens up the epoxide so that ther are 2 OH groups.. DHD dehydrogenase makes the ring aromatic again  
Term
3 reduction reactions
Definition

1. nitro to amino

2. azo to amino

3. aldehydes/ketones to alcohol

Term
Nitro to Amino Reduction
Definition

Substrate: Aromatic Nitro compounds

  • nitro group: N=O O (negative oxygen positive nitrogen)

2 intermediates:

1.nitroso (Ar-N=O)  

2. hydroxylamine ( Ar-NHOH)

final product: amine (Ar-NH2)

 

each step = 1 reduction.  you go from =O, to -OH, to H (attached to amine & aromatic compound)

Term
nitro reductases and bacterial reductases
Definition
enzymes for aromatic nitro reduction
Term
Azo reduction
Definition

substrate : Ar-N=N-Ar'

hydrazo intermediate: Ar-Nh-NH-Ar'

products: 2 primare amine metabolites: Ar-NH2 + H2N-Ar'


enzyme: azo reductases and bacterial reductase

Term
oxido reductases, aldo-keto reductases
Definition
reduces aldehydes and ketones into alcohols
Term
chloral hydrate
Definition
example of pro drug.. it undergoes reduction to produce trichloroetaol
Term
ester hydrolysis
Definition

product: alcohol & acid 

example: asprin

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