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MCC Biology 1000 Professor K. Sak
Biology 1000 Ch 2 Basic Chemistry
34
Biology
Undergraduate 1
09/04/2016

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Cards

Term
Define matter.  
Definition

Is anything that occupies space and has mass (weight). 


 

Matter is composed of 92 naturally-occurring elements
Term
What forms can matter take?
Definition
Matter is found in three states
1. Solid – rocks, you and me 
2. Liquid – water
3. Gas – air
Term

Define element.  


****Note element, atom, & molecule are interchangable terms. 

Definition

Is a substance that cannot be broken down to simpler substances that are different. 


An element is a substance that cannot be broken down to simpler substances that are different

 

Each element is known by its name (usually Latin) and a 1 or 2 letter abbreviation
Term
Define atom.
Definition

Is the smallest unit of an element. 


****Note element, atom, & molecule are interchangable terms. 



Term
Name the 4 atoms make up 96% of the weight of an organism. 
Definition
1. Carbon
2. Hydrogen
3. Nitrogen
4. Oxygen 
****In order from most to least as it relates to the quantity in the human body. 
Term
Name the 3 subatomic particles that atoms are composed of and the arrangement of the particles in an atom, and the charge of each.
Definition
3 subatomic particles
1. Protons are positively charged. 
2. Electrons are negatively charged. 
3. Neutrons are electrically neutral. 


Term
The arrangement of subatomic particles in an atom. 
Definition

1. # Protons = # Neutrons = # Electrons. 

2. The nucleus is the small, dense region in the center of the atom consisting of protons and neutrons (in clusters). 

3. Electrons occupy shells outside nucleus. 

 
Term
How is the atomic number of an atom determined?
Definition

The atoms are numbered in the periodic table for the number of protons they have. 



Term
How is the atomic mass of an atom determined?
Definition

Atomic mass = protons and neutrons (combined together). 

Each atom has mass called atomic mass

 

Atomic mass of an atom depends on the number of subatomic particles 
 
Term
Why don’t electrons contribute to atomic mass?
Definition
 Electrons - do not contribute to the atomic mass because it does not have any mass or weight enough to contribute. 
Term
What is an isotope?
Definition
Atoms of the same element that have different number of neutrons
 

 

•Isotopes are occur naturally in nature
* Sometimes have an extra neutrons. 
Term
Can isotopes be of benefit?
Definition
1. Can be used as tracers to follow chemical processes in the body.
2. Mutagenic – cause damage to the DNA in cells. 

Define: The isotopes behave chemically just like the “normal” element but because we can detect the energy given off by the isotopes, we have found ways to use them.
 
Term
Why do electrons “stay” in their shells around the nucleus?
Definition
•Electrons are attracted to the positive nucleus
–Revolve around nucleus in orbitals or shells
•It takes energy to keep the electrons in their shells
–Each shell has different energy levels
–Outermost shell = valence shell

•The valence shell is important because it will determine the chemical properties the atom will have

Term
Know the octet rule and how the electrons are ordered around the nucleus.
Definition
Atoms are most stable when their valence (outer most) shell has 8 electrons
•Atoms want to try to add electrons or loose electrons to have 8 in the valence shell
•Number of electrons in outer shell determine the chemical properties or reactivity of the atom
–If 3 or less – Tendency to donate electrons
–If 5 or more – Tendency to receive electrons

 

Atoms that donate or receive electrons create compounds and molecules in chemical reactions
Term
What particle of an atom participates in chemical bonds?
Definition

Electron

•Number of electrons in outer shell determine the chemical properties or reactivity of the atom
–If 3 or less – Tendency to donate electrons
–If 5 or more – Tendency to receive electrons

 

Atoms that donate or receive electrons create compounds and molecules in chemical reactions
Term
Know the difference between a compound and a molecule.
Definition
Molecules are substances consisting of two or more atoms of the same element
•Compounds are substances consisting of two or more atoms of different elements
 ********NOTE: Terms are often used interchangeably molecules & compounds. 
Term
Know what a chemical formula tells you
Definition
•Compounds and Molecules have chemical formulas which indicate the atoms and the number of atoms that they are comprised of.

 

–Shows each element symbol and the number of each
Term
Know the types of chemical bonds discussed in class and how each is formed.
Definition

Chemical Bonds

C6H12O6: Is one molecule. 

C6 = indicates 6 atoms of carbon.

H12 = indicates 12 atoms of hydrogen.

O6 = indicates 6 atoms of oxygen.


•REMEMBER:
•Number of electrons in outer shell determine the chemical properties or reactivity of the atom
–If 3 or less – Tendency to donate electrons
–If 5 or more – Tendency to receive electrons

 

Atoms that donate or receive electrons create compounds and molecules in chemical reactions
Term

What does it mean when a molecule is polar and non-polar?  

Definition
•The atoms of covalent bonds do not always share the electrons equally. 
Nonpolar – equal sharing of electrons.
Polar – one atom attracts electrons to a greater degree
 
Nonpolar molecules (no “+” or “-” parts) dissolve only slightly or not at all in
water.
Hydrophobic

Polar molecules have “+” and “-” parts and  easily dissolve in water because water has  “+” and “-” parts
Hydrophilic
 
Term
What about water? 
Definition
Water is a polar molecule. 
•Oxygen is a HUGE atom with 8 protons
•Hydrogen is tiny with 1 proton
•Electrons spend more time around the oxygen nucleus
•The oxygen side has a “-” charge
•The hydrogen sides have a “+” charge 


Term
Define what an acid is.
Definition
Acid: substance that dissociates in water and releases H+ ions
–Increases the number of H+ ions in the solution

 

–Ex: HCl → H+ + Cl-
Term
Define what a base is.
Definition
Base: substance that either takes up H+ ions or releases OH- ions

 

–Ex: NaOH → Na+ + OH-
Term
What is a buffer?  
Definition
•Because of the changes in pH can affect living organisms metabolism there are substances that resist changes in pH
–Helps keep pH in “normal” range
–Work by taking up excess H+ or OH- ions
•Our blood: pH ~ 7.4 – changes can be life threatening
–pH: 7.0 = acidosis
–pH: 7.8 = alkalosis
Term
How do buffers work?
Definition

Buffering System in Our Blood

•Components: carbonic acid, bicarbonate
–Helps keep pH in “normal” range
–Work by taking up excess H+ or OH- ions
•Both are in the blood:H2CO3            H+ + HCO3-

When H+ added to blood: H+ + HCO3-               H2CO3

When OH- added to blood: OH- + H2CO3           HCO3- + H2O 

 

Term
Bohr Model
Definition
•The number of electrons per shell is:
–1st electron shell = 2 electrons
2nd electron shell = 8 electrons
3rd electron shell  = 18 electrons
Always start with the innermost shell!
Term

Define solution, solvent and solute.

 

Definition
Water is a Solvent
Solutions consist of:
–A solvent = fluid – usually water

 

–A solute  = what you want to dissolve
Term
Importance of Water in Biology & It's properties
Definition
•All chemical reactions occurring in an organism – occur in water
Properties of Water
–Solvent
–High heat capacity
–High heat of evaporation
–Cohesive and adhesive
–Density
–Dissociation

•These properties are a result of the hydrogen bonding between the water molecules

Liquid Water
•Water is a liquid because of the hydrogen bonding between the water molecules
Term
Are element and atom interchangeable terms for this class? 
Definition
Yes, per Professor Sak for the purpose of this class element and atom are interchangeable terms. 
Term

When does radioactive occur? 

Definition

When the element wants to eject the extra neutrons which releases radioactive, which can cause problems. 


* Which is called decaying, which is getting rid of the extra neutrons. 

Term

What is radiation?

Definition

** Is caused by isotopes that spontaneously decay.


As the isotope decays it gives off energy in the form of rays and subatomic particles which can be detected in a number of ways. 

Term

Compunds and Molecules 

Definition

Molecules of hydrogen or oxygen form when 2 identical atoms combine chemically.

 

 

When 2 atoms of hydrogen combine with 1 atom of oxygen, the compound water is formed. 


****Example of a Compound

*Table Salt or sodium chloride

- equal parts of sodium (Na) & chlorine (Cl)

****** Characteristics dramatically different than the elements that they are made up from 

Term

Ionic Bonds 

Definition

Are Electron donor and electron acceptor.

Ions = giving and taking of electron creates charged atoms.

 

Ionic bond = attraction between two ions. 

 

Ionic compounds dissociate in water

***An Ionic bond is a "give and take" followed by the attraction or positive and negative. 
Term

Convalent Bonds 

Definition

1. Sharing of electrons

     - Both atoms get "full" outer shell - at least 8 electrons.

 

2. Atoms can share multiple pairs of electrons

    - Double bond

    - Triple bond

 

Ex.) Negatively chargerd electron is H20

H20 - can break down almost anything, except oil has no positive or negative side. 

Without a pos/neg elements cannot dissolve in H20. 

Term
Electronegativity:
Definition
Electronegativityability to attract electrons
–Depends on number of protons!
–More protons = more positive charge = stronger “pull” on the negatively charged electrons
–Electrons will spend more time around the atom with the larger number of protons. 
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