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MCB 2410 Chapter 12
for exam 2
22
Biology
Undergraduate 1
03/29/2011

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Term
semiconservative replication
Definition
a process in which each of the original nucleotide strands remains intact (conserved), despite no longer being combined in the same molecule; the original DNA molecule is half conserved during replication
Term
replication origin
Definition
where replication starts
Term
replication bubble
Definition
a loop generated by the unwinding of the double helix
Term
Bidirectional replication
Definition
when the forks at each end of the replication bubble proceed outward in both directions, simultaneously unwinding and replicating the DNA
Term
DNA polymerase
Definition
the enzyme that synthesize DNA; can only add nucleotides at the 3' end of the growing strand
Term
Leading strand
Definition
new strand being synthesized in the 5' to 3' direction and undergoes continuous replication
Term
Continuous replication
Definition
replication of the leading strand in the same direction as that of unwinding, allowing new nucleotides to be added continuously to the 3' end of the new strand as the template is exposed
Term
Okazaki fragments
Definition
short lengths of DNA produced by the discontinuous replication of the lagging strand
Term
DNA helicase
Definition
breaks the hydrogen bonds that exist between the bases of the two nucleotide strands of a DNA molecule
Term
Single strand binding protein (SSBs)
Definition
an enzyme that stabilizes the single-stranded DNA by attaching tightly to the exposed single-stranded DNA
Term
Primase
Definition
synthesizes short stretches of nucleotides to get DNA replication started; synthesizes a short stretch of RNA nucleotides, which provides a 3'-OH group to which DNA polymerase can attach DNA nucleotides; this is an RNA polymerase
Term
Primer
Definition
short stretches of nucleotides that get DNA replication started
Term
DNA ligase
Definition
an enzyme that catalyzes the formation of a phosphodiester bond between adjacent 3'-OH and 5'-phosphate groups in a DNA molecule
Term
Topoisomerase
Definition
enzyme that adds or removes rotations in a DNA helix by temporarily breaking nucleotide strands; controls the degree of DNA supercoiling
Term
Proofreading
Definition
ability of DNA polymerases to remove and replace incorrectly paired nucleotides in the course of replication
Term
Mismatch repair
Definition
process that corrects mismatched nucleotides in DNA after replication has been completed. Enzymes excise incorrectly paired nucleotides from the newly synthesized strand and use the original nucleotide strand as a template when replacing them
Term
Replication licensing factor
Definition
protein that ensures that replication takes place only once at each origin; required at the origin before replication can be initiated and removed after the DNA has been replicated
Term
telomerase
Definition
enzyme that is made up of both protein and RNA and replicates the ends (telomeres) of eukaryotic chromosomes. The RNA part of the enzyme has a template that is complementary to repeated sequences in the telomere and pairs with them, providing a template for the synthesis of additional copies of the repeats
Term
replication fork
Definition
the point of unwinding, where the two single nucleotide strands separate from the double-stranded DNA helix
Term
lagging strand
Definition
DNA strand that is replicated discontinuously
Term
discontinuous replication
Definition
replication of the lagging strand in the direction opposite that of unwinding, which means that DNA must be synthesized in short stretches (Okazaki fragments)
Term
Gyrase
Definition
E. coli topoisomerase enzyme that relieves the torsional strain that builds up ahead of the replication fork
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