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MCAT Biology Review 2
Genes
58
Biology
Not Applicable
07/17/2011

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Term
Gene
Definition

A series of DNA nucleotides that generally codes for the production of a single polypeptide or mRNA, rRNA or tRNA.

 

Eukaryotes have more than one copy of each gene, prokaryotes have only one.

Term
The Central Dogma
Definition
DNA -(transcription)->RNA-(translation)->amino acids
Term
Purines
Definition

Two ring structures.

 

Adenine and Guanine.

Term
Pyrimidines
Definition

Three Ring Structures.

 

Thymine, Uracil and Cytosine.

Term
Phosphodiester Bond
Definition
The bond formed between C3 of one deoxyribose and C5 of the other which creates a sugar-phosphate backbone of a single strand of DNA with 5'->3' directionality.
Term
Adenine and Thymine bond
Definition
Two Hydrogen bonds form.
Term
Guanine and Cytosine bonding
Definition
This forms 3 Hydrogen bonds.
Term
DNA replication
Definition
Semiconservative replication of DNA that occurs one time in each cell life cycle.[image]
Term
DNA polymerase
Definition

The enzyme that builds the new DNA strand.

 

Cannot initiate from two nucleotides, but can only add nucleotides to an existing strand (requires an RNA primer)

 

Reads the DNA strand in the 3'->5' direction but creates the complimentary strand in the 5'->3' direction.

Term
DNA Ligase
Definition
Moves along the lagging strand of the DNA tying together the Okazaki fragments.
Term
Process of Replication
Definition
  1. Helicase unzips double strand.
  2. RNA Polymerase builds primer
  3. DNA Polymerase assembles leading and lagging strands
  4. primes are removed
  5. Okazaki frags are joined

 

Term
Telomeres
Definition

Repeated six nucleotide units from 100 to 1000 units long that protect chromosomes from being eroded through repeat rounds of replication.

 

Telomerases catlyze the lengthening of telomeres.

Term
Difference between DNA and RNA
Definition
  • DNA is made from deoxyribose, RNA is from ribose.
  • DNA is double stranded, RNA is single
  • Thymine vs. Uracil
  • DNA is produced by replication, RNA by transcription.
  • In animals DNA is only in the nucleus and mitochondrial matrix, RNA is also in the cytosol.
  • One type of DNA vc. 3 types of RNA.
Term
Transcription
Definition
The process of manufacturing RNA from a DNA template.
Term
Initiation
Definition

The beginning of transcription.

 

Transcription initiation complex formed after promoter on DNA is found by initiator factors.

Term
Promoter 
Definition
A beginning point for transcription.
Term
mRNA
Definition
Delivers the DNA code from the nucleus to the cytosol where proteins are manufactured.
Term
rRNA
Definition
Combines with proteins to form ribsomes.
Term
Ribosomes
Definition
The cellular complexes that direct the synthesis of proteins.
Term
tRNA
Definition
Collects amino acids from the cytosol and transfers them to the ribsomes for incorporation into a protein.
Term
Elongation
Definition

RNA polymerase transcribes only one strand of the DNA nucleotide sequence into a complementary RNA nucleotide sequence.

 

Only the template strand is transcribed.

 

 

Term
Termination
Definition

The ending of transcription after a termination codon has been reached.

 

UAG

UGA

UAA

Term
Operon
Definition

The genetic unit that usually consists of an operator, promoter and genes that contribute to a single prokaryotic mRNA.

Genes on an operon are transcribed on one mRNA.

Genes outside the operon may code for activators and repressors.

Term
Primary Transcript
Definition

The initial mRNA nucleotide sequence arrived at through transcription.

 

Processed by:

  1. addition of nucleotides
  2. deletion of nucleotides
  3. modification of nitrogenous bases
Term
snRNPs
Definition

Small nuclear ribonuclearproteins

Recognize nucleotides sequences at the ends of introns.

Term
Introns
Definition

Genetic information that does not code for a protein.

Remain in the nucleus.

Term
Exons
Definition

Genetic information that codes for proteins.

Spliced together and exit the nucleus to be translated to proteins.

Term
Denatured
Definition

When the hydrogen bonds connecting two strands in a double stranded DNA molecule are disrupted and the strands separate.

 

DNA with more CG bonds has a higher melting temperature since these molecules have 3 H bonds (vs. TA 2 H Bonds)

Term
Nucleic Acid Hybridization
Definition
The bonding of strands after the denaturing of nucleic acids: DNA-DNA, DNA-RNA, RNA-RNA
Term
Restriction Enzymes
Definition

Cut nucleic acid at certain nucleotide sequences along the chain [at restriction sites].

 

Restriction sites are usually palindromic.

Term
Recombinent DNA
Definition
Two DNA fragments that have been cleaved by the same endonuclease that are joined together artificially.
Term
cDNA
Definition
DNA reverse transcribed from mRNA. It lacks introns normally found in eukaryotic DNA.
Term
PCR
Definition

Polymerase Chain Reaction

A way to clone DNA exponentially.

Term
Southern Blotting
Definition

A technique used to identify target fragments of known DNA sequence in a large population of DNA.

 

It identifies specific sequences of DNA by nucleic acid hybridization.

Term
Northern Blotting
Definition
Identifies RNA fragments by nucleic acid hybridization..
Term
Western Blotting
Definition

Detects a protein with antibodies.

Can detect a particular protein in a mixture of proteins.

Term
Translation
Definition
The process of protein synthesis directed by mRNA.
Term
Roles of RNA in translation
Definition

mRNA is the template that carries the genetic code from the nucleus to the cytosol in the form of codons.

 

tRNA contains a set of nucleotides that is complementary to the codon, called the anticodon. tRNA sequesters the amino acid that corresponds to the anticodon.

 

rRNA with proteins make up the ribosome which provides the site for translation to take place.

Term
Eukaryotic Ribsomes vs. Prokaryotic
Definition
40S+60S (80S) vs. 50S+30S (70S)
Term
Nucleolus
Definition
Site of ribosome assembly.
Term
Signal Recognition Particle (SRP)
Definition
Carries the entire ribosome complex to a receptor protein on the ER.
Term
mutation
Definition
Any alteration in the genome that is not genetic recombination.
Term
Missence Mutation
Definition
A base-pair mutation that occurs in the amino acid coding sequence of a gene.
Term
Nonsense mutation
Definition
A base pair mutation that results in a stop codon.
Term
Oncogenes
Definition
Genes that cause cancer.
Term
Chromatin
Definition

The entire DNA/protein complex.

 

1/3 protein, 2/3 protein, and a small amount of RNA

Term
Histones
Definition
Globular protein that DNA wraps tightly around.
Term
Nucleosome
Definition
Eight histones wrapped in DNA.
Term
Interphase
Definition
G1, S, G2 Phases in the cell cycle.
Term
G1
Definition

Cell grows in size producing new proteins and organelles.

 

Heterochromatin unwinds to euchromatin.

 

Must reach certain size/synthesize enough protein to continue.

Term
G0
Definition
Nongrowing state distinct from interphase.
Term
S
Definition

Devotes most of cellular energy to replication of DNA.

Chromosomes are duplicated.

Each chromosome is made of sister chromatids now.

Term
G2
Definition

The cell prepares to divide.

Organelles continue to duplicate.

RNA/Protein synthesized.

When MPF (Mitosis promoting factor) is high enough, mitosis begins.

Term
Meiosis
Definition
The double nuclear divison that produces four gametes.
Term
Primary oocyte/ Primary spermatocyte
Definition

After replication occurs in the S phase of interphase of the spermatogonium and oogonium.

 

Primary oocytes are arrested at birth until puberty where they undergo division right before ovulation to become secondary oocytes each month.

Term
Meiosis I
Definition
Reduction divison.
Term
Metaphase I vs Metaphase II
Definition
Metaphase II resembles Metaphase in Mitosis. Metaphase I does not.
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