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Lecture 8 - MT and IF
Name and function of proteins and molecules reguarding microtubules and intermediate filaments
39
Biology
Undergraduate 3
03/05/2013

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Term
Actin Filaments and Microtubules
Definition
distinct gene products BUT markedly similar mechanisms of function
- regulated assembly from a large number of locations
- highly dynamic
- polarized
- tracks for myosins/kinesins and dyneins
Term
Microtubule Site: Cytoplasm
Definition
- positioning of organelles
- Trafficking of vesicles
Term
Microtubule Site: Motile Cilia
Definition
9+2 configuration
- airway epithelial cells
- apical (lumenal) membrane
- particle clearance
Term
Flagella
Definition
- sperm
- locomotion
Term
Microtubule Site: Primary Cilia
Definition
9+0 configuration
- epithelial cells
- immotile
- sensory organelle
Term
Microtubule Site: Neuronal Axons
Definition
- anterograde transport
- retrograde transport
Term
Microtubule Site: Mitotic Spindles
Definition
- segregation of chromosomes
Term
Organization of the Microtubule Wall
Definition
- tubulin heterodimers stack to form protofilaments
- MT wall (25 nm) has 13 tubulin protofilaments
- Lateral interactions stabilize MT wall
- there is a 3-subunit rise in a full turn
- a-B mismatch produces a seam
- microtubules have POLARITY
Term
Microtubule Organization Center (MTOC)
Definition
sites to nucleate MT assembly
Term
Centrosomes
Definition
- centrioles (length: 0.5 micron,diameter: 0.2 microns)
- pericentriolar material
- gamma-tubulin ring complex
Term
Gamma-Tubulin Ring Complex
Definition
- binds and orients gamma-tubulin
- binds and stabilizes the MT (-)end
Term
Dynamic Instability
Definition
individual MTs undergo constant growth and shrinkage
- growth rates: ~1 micron/min
- shrinkage rates: ~7 microns/min
Term
Rescue
Definition
growing MT: blunt end
- rate of GTP-B-tubulin addition > rate of GTP hydrolysis
Term
Catastrophe
Definition
shrinking MT: ram horns
Term
Microtubule Associated Proteins (MAP)
Definition
specific proteins co-purify with tubulin (brain homogenates)
- co-precipitated proteins "decorate" MTs in vitro
- moderating MT dynamics
Term
Lateral Binding MAPs
Definition
Tau-family of proteins
- bind to lateral aspects of MT (+ charged 18 aa repeats)
- stabilizes MT against catastrophe
- moderate MT spacing
Term
Tau and MAP2
Definition
neuronal proteins found within the axons
- impact MT spacing
- axon-like projections in non-neuronal cell line following tau or MAP2 transfection
Term
+-Tip Binding Proteins - EB1
Definition
promoting GROWTH AND STABILITY (plus end tracking proteins)
- can enhance polymerization
- can inhibit catastrophe
- can help capture appropriate targets
Term
+-Tip Binding Proteins - Kinesin-13 and Stathmin
Definition
promoting CATASTROPHE (plus end tracking proteins)
- can induce severing of the + end
- shortens MT length
- removes GTP-Tubulin cap
Term
Kinesin-13
Definition
- binds + end of MT
- severs end dimers
- ATP-dependent
Term
Stathmin
Definition
- binds two dimer pairs
- bends pairs into GDP configuration
- regulated by phosphorylation
Term
Lysine Acetylation/Detyrosylation
Definition
Post-Translational Modification of Microtuble
- stabilizes MT/kinesin-1
Term
Polyglutamylation/polyglycylation
Definition
Post-Translational Modification of Microtubule
- stabilizes MT
Term
Colchicine, Nocodazole
Definition
depolymerize MTs
- bind to soluble heterodimers
- prevents assembly
- shift equilibrium
Term
Taxol
Definition
stabilize MTs
- bind to assembled MT (along inner MT surface)
- shift equilibrium
Term
Colchine
Definition
- found in the meadow saffron
- an early treatment for gout
- King Henry VIII was treated for gout
- likely inhibited the inflammatory response by white blood cell in gout patients
Term
Intermediate Filaments
Definition
Structural Support and Organization of Higher Eukaryotes
Term
Distinguishing Characteristics of IF vs. MT/MF
Definition
- biochemically heterogeneous subunits
- great TENSILE strength
- NO intrinsic polarity
- NO nucleotide binding
- NO known IF-Motor Proteins
- much more stable
- not found in ALL eukaryotes
Term
Stress
Definition
Amount of 'pull' on a filament
Term
Strain
Definition
resulting deformation from stress
Term
NLS
Definition
nuclear localization signal
Term
CaaX
Definition
lipid anchorage site
Term
Class I and II: Keratins
Definition
- obligate heterodimers: one acidic and one basic keratin per dimer
- keratins are linked to desmosomes vis desmoplakin
- mechanical forces of the skin are borne by keratins and transferred to the underlying dermal layer
Term
Class III: Vimentin-like
Definition
- desmin in myocytes (striated muscle)
- tethers to Z-discs, in register, to the surrounding sarcolemma
Term
Class IV: Neurofilaments
Definition
three related subunits:
- NF-L (light)
- NF-M (medium)
- NF-H (heavy)
- variance is due to differences in the C terminal domain
- form heterodimers
- present in the axons of neurons
Term
NF(M)(-/-) mice
Definition
- diminished axonal diameters
- slower rates of AP conduction
- mice are viable
**neurofilaments impact the diameters of axons
Term
Class V: Lamins
Definition
Three genes in humans
- one gene for A and C type (alternative spliceoforms)
- expression is developmentally regulated
- Two genes for B type
- the primordial lamin protein
- constituitively expressed in all lamin-containing cells
- isoprenylated (localize to the INM)
- bind to INM proteins (e.g. LBR, emerin, LAP2)
- tether chromosomal DNA to the INM
- phosphorylation (CDK1) results in disassembly
Term
Laminopathies
Definition
genetic diseases of intermediate filaments
Term
Plectin
Definition
crosslinker between intermediate filaments and MTs/MFs
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