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Lecture 4. Comp Applications
Mark Recapture
36
Science
Graduate
03/04/2013

Additional Science Flashcards

 


 

Cards

Term
Capture Mark Recapture
Definition
any set of animals that is encountered by a capture is an incomplete count of the population
Term
Mark Recapture formula
Definition
True population= sample/capture probability
N=n/p hat
Term
CMR-capture probability is constant over____
Definition
time, space, and among animals
Term
CMR

N is
Definition
Abundance in the closed population during the study interval
Term
CMR

k is
Definition
# of capture/recapture occasions
Term
CMR

Xw is
Definition
# of animals having unique capture history w
Term
CMR

ni is
Definition
# of animals caught at marked at each capture occasion
Term
CMR

mi is
Definition
# of marked animals at each capture occasion
(RECAPTURES)
Term
CMR

r is
Definition
# of distinct animals captured over the course of the study
Term
Whats the problem with LP?
Definition
closed pop assumption
MARK will estimate this for open populations
Term
What does Cormack-Jolly-Seber (CJS) measure?
Definition
survival, recapture, population estimate
Term
What does dead recoveries measure?
Definition
survival, recovery
Term
What does known fate and nest survival measure?
Definition
survival
Term
link between CMR and survival analyses
Definition
Survival rate
Term
survival rate
Definition
probability an animal survives from time x to time y
Term
Cormack Jolly Seber
Definition

obtained from re-encounters of live animals, potentially recaptured over several occasions

Same animal may appear multiple times in the data

Term

CJS


Φ=

Definition
[image]
Term

CJS

 

10

11

Definition

10- not captured

11- captured/ dead/ emigrated

Term
Cormack Jolly Seber Assumptions
Definition
  • Homogeneity of capture and survival probabilities for  marked animals within each sample occasion
  • Instantaneous recapture
  • release Emigration is permanent
Term
Dead Recoveries
Definition
very important for game birds and trout and salmon only one recapture
Term
Dead Recoveries difference from CJS
Definition
no need to calculate recapture probabilities and need estimate of prob of tag recovery
Term
Dead recovery analysis requires the following
Definition

 

2 periods (2 years recommended)

 

5 or more releases followed by recoveries
Term


Dead Recoveries


 R denotes

mij  denotes

f denotes


Definition



R denotes sample of tagged animals


mij denotes released in period i and recovered in period j

tag recovery rate (depends on which case)

Term

Case: 1-S-f

 

Definition

Case 1: when hunters shoot and retrieve banded birds

 

Term
Case: (1-S)(1-r); where (1-S) is probability of mortality and (1-r) is the probability of finding and reporting
Definition
Case 2. In many banding studies, marked animals are found dead and then reported
Term

Case 1.  Dead recoveries notation

 

Released --> killed, and reported---> ???

Definition
[image]
Term

Case 1. Dead Recoveries

 

 

Released---> survives to next banding period--->

Definition
s
Term

Case 1. Dead Recoveries

 

 

Released---> killed and not reported OR died--->

Definition
1-s-f
Term

Case 2.Dead Recoveries

 

Released--->survives to next banding period---->

Definition
[image]
Term

Case 2.Dead Recoveries

 

Released--->killed retrieved and reported---->

Definition
(1-S)r
Term

Case 2.Dead Recoveries

 

Released--->killed and not reported or died---->

Definition
(1-S)(1-r)
Term
Dead Recoveries Assumptions
Definition

 

Marking is representative of  the population of interest

 

No tag loss

 

Tags are correctly recorded during banding and reporting

 

Fates of tagged animals are independent

 

*Homogeneity of survival and recovery probabilities for marked animals within parameter of interest

 

Term
standard error=
Definition
square root of variance
Term
Lincoln peterson model is the earliest for of what theory?
Definition
CMR
Term
CJS is used for
Definition
it's a cmr model used for looking for carcasses or only one recapture event
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