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Lecture 24
Brock
29
Microbiology
Undergraduate 3
04/08/2014

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Term
aminoacyl-tRNA synthestases
Definition
enzyme that link amino acid and tRNA together (requires ATP)
Term
acceptor

CCA
Definition
3 unpaired nucleotides at 3' end of tRNA ; added after transcription
Term
covalent ester linkage to the ribose of adenine in acceptor (CAA)
Definition
how is the amino acid attached to tRNA?
Term
ribosome
Definition
site of protein synthesis
Term
initiation, elongation, termination
Definition
steps of protein synthesis
Term
GTP
Definition
energy source of protein synthesis
Term
30S and 50S
Definition
subunits of prokaryotic ribosomes
Term
30S contains 16S rRNA and 21 proteins

50S contains 5S and 23S rRNA and 31 proteins
Definition
how many proteins and RNA is in each subunit of the prokaryotic ribosome?
Term
formylmethionine tRNA
Definition
a free 30S ribosomal subunit reconizes a mRNA transcript, some initiation proteins and ______ to start transcription
Term
70S ribosome
Definition
when 50S subunit adds to 30S subunit ___________ is formed
Term
methionine

AUG
Definition
what does start codon code for?
Term
shine-delgarno sequence
Definition
ribosome binding site complementary to bases in the 16S rRNA
Term
A site

acceptor site
Definition
location where incoming tRNA first attaches to ribosome (assisted by elongation factor)
Term
elongation factor
Definition
assists attachment of first tRNA to ribosome and helps P site
Term
P site

peptide site
Definition
where previous tRNA holds the growing polypeptide chain to the ribosome (uses GTP and elongation factors)
Term
E site

exit site
Definition
where tRNA is released
Term
protein release factors (RFs)
Definition
cleave polypeptide from final tRNA during termination of translation
Term
polysome
Definition
complex of many ribosomes simultaneously translating a mRNA
Term
neomycin
Definition
antibiotic that doesn't let prokaryotic ribosomal subunits separate
Term
molecular chaperone

chaperonins
Definition
assist protein folding and prevent the accumulation of misfolded proteins

also, refold partially denatured proteins
Term
signal sequence
Definition
15-20 residues at beginning of protein (several positively charged residues, a central hydrophobic region, and a polar region)

tells the secretory system the that the protein is to be exported (stops it from completely folding inside the cell)
Term
SecA
Definition
binds to proteins that are to be fully exported across membrane and out of cell
Term
SRP

signal recognition particle
Definition
binds to proteins that are to be inserted into cell membrane

single protein + small noncoding RNA molecule
Term
protease
Definition
removes the signal sequence to allow protein to fold
Term
secretory system
Definition
signal sequence signals that a protein is to be exported so something binds to it causing it not to fold until exported
Term
Tat system
Definition
transport already folded proteins out of cell
Term
twin arginine translocase
Definition
Tat stands for ________
Term
TatBC
Definition
protein that recognizes pair of arginine residues in a proteins signal sequence

carry the protein to TatA
Term
TatA
Definition
membrane transporter that uses proton motive force to export folded proteins that are brought to it by TatBC
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