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Lecture 22
Brock
22
Microbiology
Undergraduate 3
04/08/2014

Additional Microbiology Flashcards

 


 

Cards

Term
replication fork
Definition
zone of unwound DNA where replication occurs
Term
helicase
Definition
enzyme that uses ATP to unwind the double-stranded DNA to expose short-single stranded regions

advances the replication fork
Term
single-strand binding protein
Definition
protein that stabilizes separated DNA to keep it from reforming double-stranded DNA during replication
Term
origin of replication (oriC)
Definition
single location on the chromosome where replication is initiated in bacteria
Term
leading strand
Definition
replicating DNA that forms continuously
Term
lagging strand
Definition
replicating DNA that forms discontinuously and requires multiple RNA primers
Term
Okazaki fragments
Definition
short segments that make up lagging strand
Term
DNA Polymerase I (Pol I)
Definition
enzyme that removes RNA primer and replaces it with DNA
Term
DNA Polymerase III (Pol III)
Definition
several proteins including sliding clamp and clamp loader

adds ~1000 nucleotides per second
Term
DNA ligase
Definition
enzyme that creates final phosphodiester bonds between nucleotides
Term
theta structure
Definition
characteristic shape formed during bidirectional replication of bacterial chromosome from OriC
Term
replisome
Definition
large complex of proteins involved in the replication fork

DNA moves through this complex
Term
DNA polymerase III and I
Definition
enzymes that detect errors/mismatches in base pairs based on incorrect H bonding
Term
exonuclease
Definition
removes incorrect bases during replication
Term
Tus proteins
Definition
proteins that recognize termination sites in DNA sequences
Term
Ter (termination) sites
Definition
sites on chromosome that signal end of replication
Term
topoisomerase IV

and possible FtsZ
Definition
links two circles of DNA together during termination
Term
PCR
Definition
DNA replication in a test tube
Term
amplification
Definition
process by which PCR creates up to a billion copies of specific genes or DNA segments
Term
target
Definition
gene or DNA segment desired for PCR replication
Term
Template
Definition
entire DNA molecule used in PCR
Term
thermalcyclers
Definition
machine used for PCR
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