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Lab Exam 1
Microbiology BIO 4 Lim Cabrillo Lab Exam 1
106
Microbiology
Undergraduate 1
02/23/2014

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Term
Supplemented thioglycollate
Definition
used to assess aerotolerance but has added nutrients for growing bacterial cultures
Term
Kirby Bauer Test
Definition
tests antibiotic sensitivity
-uses standardized conditions of 1/4 inch thick Mueller-Hinton agar plates; pH between 7.2-7.4; lawn made from .5 McFarland turbidity standard; antibiotic discs have a standard amount of antibiotic in them
-procedure: Label plate; innoculate plate to create lawn; apply antibiotic discs without overlapping zones of inhibition; press discs firmly into agar so they stick; invert plates and incubate.
Term
broad spectrum antibiotic
Definition
effective against both gram positive and gram negative cells
-used when specific bacteria causing infection is unknown
Term
narrow spectrum antibiotic
Definition
effective against either NOT BOTH gram positive and gram negative cells
-used when cause of infection is known - prevents killing off good bacteria in the body
Term
S10
Definition
Streptomyocin
-gram negative narrow
Term
C30
Definition
Chloramphenicol
-broad spectrum
Term
CF30
Definition
Cephalothin
-broad spectrum
Term
TE30
Definition
Tetracycline
-broad spectrum
Term
P10
Definition
penicillin
-not effective
Term
NB 30
Definition
Novobiocin
-gram positive narrow
Term
S10
Definition
Streptomyocin
-gram negative narrow
Term
E15
Definition
Erithromyocin
-gram positive narrow
Term
VA30
Definition
Vancomyocin
-gram positive narrow
Term
E. coli gram ...
Definition
negative
Term
S. aureus gram ...
Definition
positive
Term
Antiseptic
Definition
used on living tissue
-longer contact time (time it continues to work)
-iodine
Term
Disinfectant
Definition
-used on inanimate objects
-decreases number of bacteria, but not sterilizing
-bleach
Term
confluent growth
Definition
continuous bacterial growth without discrete colonies
Term
lawn on agar plate
Definition
covering the entire surface of a plate with bacteria to grow
-start in middle and do one half, back and forth; then start in middle and do other half; rotate 90 degrees; start in middle and do one half; then start in middle and do other half
Term
gram negative bacteria are more resistant to antibiotics because
Definition
of their outer membrane
Term
Gram positive cells are more or less susceptible to antibiotics than gram negative cells?
Definition
Gram positive cells are more susceptible
Term
Zone of inhibition
Definition
-area of no bacterial growth around an antibiotic disc
-measured in mm
Term
resistance OR susceptibility to antibiotic shown through zone of inhibition
Definition
must compare measurement to standardized chart
Term
aseptic technique
Definition
-used to prevent contamination/keep cultures pure
-procedure: use inner blue cone on bunsen burner; sterilize loop; remove cap of tube with little finger; flame tube; cool loop on tube; flame tube; close tube; innoculate culture with loop; sterilize loop
Term
streak plate technique
Definition
-purpose: to isolate a single colony
-procedure: streak loop across plate in 1/4 of plate; sterilize loop; rotate plate; cool loop on agar; drag through previous section 2-3 times and then streak another 1/4 of plate; sterilize loop; rotate plate; cool loop on agar; drag through previous section 2-3 times and then streak another 1/4 of plate; sterilize loop; rotate plate; cool loop on agar; drag through previous section 2-3 times and then streak remainder of plate; sterilize loop
Term
errors in streak plate technique
Definition
-digging loop into agar
-too many streaks through last quadrant before moving on to next quadrant
-overlapping streak sections creating confluent growth
Term
BSL
Definition
Bio Safety Level
Term
precautions used for BSL 1 and 2
Definition
-goggles
-gloves
-lab coats
-close toed shoes
-long pants
-hair pulled back
-disinfectant for tables
-sterilization of tools
-autoclave contaminated materials
Term
biohazard disposal
Definition
-double bag anything that goes in biohazard bin
-biohazard glass or sharps go in red biohazard sharps container
-gloves inside out in biohazard bag
Term
Broth is used for:
Definition
??
Term
slant is used for:
Definition
-using less media than a plate (cost)
??
Term
plate is used for:
Definition
-identifying growth patterns (shape, margin)
-isolating pure colonies
Term
aseptic
Definition
pure (not sterile)
Term
sterile
Definition
no living organisms
Term
Thioglycollate
Definition
prepared using autoclave to remove all O2
-as it cools, the O2 reenters, creating an O2 gradient from aerobic to completely anaerobic in bottom of tube
Term
Obligate aerobe
Definition
needs O2 to survive
-only on top of tube
Term
Obligate anaerobe
Definition
needs no O2 to survive
-only on bottom of tube
Term
Facultative anaerobe
Definition
prefers O2, but can adapt to grow without it
-grows anywhere, better on top
Term
microaerophile
Definition
loves a LITTLE O2
-grows in a band about 1/3 way down the tube
Term
Aerotolerant anaerobes
Definition
prefers no O2, but can tolerate growth with O2
-grows anywhere, but better on bottom
Term
maximum temperature
Definition
highest temperature for cells to be able to grow
Term
minimum temperature
Definition
lowest temperature for cells to be able to grow
Term
optimum temperature
Definition
best temperature for cells to be able to grow - highest growth rate
Term
cardinal temperatures
Definition
range defined by the three temperatures in the range:
-optimum
-maximum
-minimum
Term
temperature range
Definition
the temps between the highest and lowest that an organism will tolerate to grow
Term
psychrophile cardinal temperatures
Definition
Range: -5 to 15C
Optimal: 10C
icecap
Term
psychrotroph cardinal temperatures
Definition
Range: -3 to 35C
Optimal: 25C
Santa Cruz
Term
mesophile cardinal temperatures
Definition
Range: 15 to 45C
Optimal: 40C
rainforest; human pathogens
Term
thermophile cardinal temperatures
Definition
Range: 40 to 80C
Optimal: 70C
hot spring
Term
extreme thermophile cardinal temperatures
Definition
Range: 65 to 110C
Optimal: 95C
hot spring
Term
procedure for determining temperature category of microorganism
Definition
-inoculate multiple specimens and grow at several different temperatures
-compare growth on all plates to rule out temperature ranges where there was no growth
-choose temperature category that includes all temperatures where there was some growth in medium
Term
hypotonic
Definition
-fewer ions outside cell
-low osmotic pressure
-water moves into cell
Term
hypertonic
Definition
-more ions outside cell
-high osmotic pressure
-water drawn out of cell, so plasma membrane shrinks away from cell wall (plasmolysis)
Term
isotonic
Definition
-same amount of ions (osmotic pressure) inside and outside cell
-fluid moves at same rate into and out of cell
-0.85% osmotic pressure
Term
plasmolysis
Definition
plasma membrane shrinks away from cell wall
due to cell being in hypertonic solution
Term
halophile
Definition
loves hypertonicity
Term
facultative halophile
Definition
range: 0.85% to 15%
-can grow with hypertonicity)
Term
obligate halophile
Definition
range: must have over 3%
Term
extreme halophile
Definition
range: must be over 15% up to 20%
Term
halotolerant
Definition
can grow up to 5% but not well
Term
non-halophile
Definition
grows most abundantly at 0.85%
Term
osmotic pressure order of organism tolerance
Definition
non-halophile
halotolerant
facultative halophile
obligate halophile
extreme halophile
Term
order of organism tolerance (temperatiures)
Definition
psychrophile
psychrotroph
mesophile
thermophile
extreme thermophile
Term
which osmotic pressure is closest to the average biological cell?
Definition
0.85%
Term
purpose of including water as a sample in disinfectant experiment
Definition
control
Term
procedure for preparing bacterial smear slide from broth culture
Definition
-label slide
-use transfer technique to apply bacteria to slide (3-4 loops)
-heat fix bacteria using hot plate and/or flaming slide
Term
procedure for preparing bacterial smear slide from plate/slant culture
Definition
-label slide
-add a drop of DI water to slide
-use transfer technique to apply small amount of bacteria to slide
-heat fix bacteria using hot plate and/or flaming slide
Term
what does heating a slide after applying bacteria do?
Definition
-fixes the bacteria to the slide so they don't wash away
-kills the bacteria
Term
simple stain
Definition
single stain applied to cells which makes them visible under the microscope
-allows determination of cell size, shape and arrangement
Term
procedure to prepare a simple stain
Definition
-begin with prepared slide
-drop stain onto smear and let sit for 1 minute
-rinse with DI water
-blot w bibulous paper
Term
gram staining tell us what?
Definition
-differential stain gives you information about whether a cell is gram positive or gram negative (has thick peptidoglycan VS outer membrane)
Term
differential stain
Definition
allows for detection of differences between organisms or structures within one organism
Term
stains adhere through
Definition
ionic bonding
Term
gram staining steps
Definition
-primary stain - crystal violet
-mordant - iodine
-decolorizer - alcohol
-secondary stain (counterstain) - safranin
Term
general differential staining steps
Definition
-primary stain
-mordant
-decolorizer
-counterstain/secondary stain
Term
gram stain pink results
Definition
gram negative (outer membrane)
-E coli - short bacillus
Term
gram stain purple/black results
Definition
gram positive (thick peptidoglycan)
-S aureus - coccus
-B subtilis - long bacillus
Term
Microscope parts
Definition
-on/off switch
-rheostat (dimmer switch)
-light source (bulb)
-condenser lens
-condenser lens adjustment knob
-iris diaphragm adjustment lever
-specimen stage
-specimen stage positioning knobs
-coarse and fine focus knobs
-objective lens
-occular lenses
-diopter adjuster in left ocular lens
-interpupillary distance adjuster
Term
focal plane
Definition
plane in space at which the lens is in focus (parfocal lenses have the same focal plane)
Term
how do you calculate magnification of an objective lens?
Definition
multiply number on lens by 10 (for ocular lens magnification)
Term
parfocal objectives
Definition
have the same focal plane; when they are exchanged they are very close to being in focus
Term
oil immersion improves resolution because
Definition
it minimizes light refraction by removing air from the light path
Term
resolution
Definition
sharpness of image
Term
magnification
Definition
size of image
Term
Colony Morphology Shape (3)
Definition

-circular

-irregular

-punctiform (pin-point)

Term
Colony Morphology Margin (4)
Definition

-entire

-undulate 

-lobate 

-filamentous

Term
entire
Definition

smooth edge

colony morphology margin

Term
undulate
Definition

wavy edge

colony morphology margin

Term
lobate
Definition

bumpy edge

colony morphology margin

Term
filamentous
Definition

hairy edge

colony morphology margin

Term
colony or slant morphology texture (3)
Definition

-moist

-mucoid

-dry

Term
colony or slant morphology optical properties (2 pair)
Definition

-opaque/translucent

-dull/shiny

Term
slant morphology growth pattern (3)
Definition

-filiform

-spreading

-friable

Term
friable
Definition
crusty
Term
filiform
Definition

-growth restricted to inoculation site

-edge is clear and defined
-appearance is creamy 

Term
Broth cultures morphology (4)
Definition

-uniform fine turbidity

-pellicle

-sediment

-flocculent

Term
Colony or slant Morphology Pigment
Definition
Any
Term
Uniform fine turbidity
Definition
uniform cloudiness
Term
Pellicle
Definition
raft floating on broth
Term
sediment
Definition
accumulation on bottom
Term
Plate morphology categories (5)
Definition

-shape

-margin

-texture

-optical properties

-pigment

Term
Slant morphology categories (4)
Definition

-texture

-optical properties

-pigment

-growth

Term
procedure for loop transfer of culture (10 steps)
Definition

-sterilize loop

-remove tube cap

-flame tube mouth

-cool loop on tube

-dip loop

-remove loop w/o flicking

-flame tube mouth

-close tube cap

-innoculate plate, slant or broth

-flame loop

Term
how to get single colonies on a streak plate (3 steps)
Definition

-4 quadrant

-flame loop between each quadrant

-drag cool loop through previous quadrant before moving into next

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