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Introduction to Microbiology
Microbiology, text is Microbiology, an Introduction, Tortora etal, 11th
204
Microbiology
Undergraduate 1
12/15/2013

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Term
ACUTE
Definition
Quick, hard-hitting, lasts a short time (flu)
Term
ADAPTIVE immunity
Definition
Humoral response
B cells generate antibodies
B Lymphocytes activates, but only if that particular one has the matching -
if Activated, goes to Memory B Cell; and effector cells (factories)
Cellular immunity; Cell mediated response
T - cells mature in Thymus
Helper T cells (Th)
Cytotoxic T-Cells (Tc)
Term
AMINO ACIDS
Definition
Building blocks of proteins
20 variants
coded in mRNA
tRNA molecules are the ‘wheels’ for Wants to bond with mRNA (trucks)
example, IgG made up of 1500 amino acids
Term
ANTIBODIES
Definition
AKA immunoglobulins;
made in response to antigen
binds specifically to an antigen
can cause 4 responses: Agglutination; Opsonization; Neutralization; Activation of complement
monomer is composed of 2 light chains and 2 heavy chains (variable)
IgG: 80% - help phagocytosis
IgM: 1st responder - 5 “y” together - braun
IgA: Protection on mucous membranes; eyes; backup to 1st Line
IgD: unknown
IgE: help eosinophils (remove parasitic worms)
Comes from B Cells
Term
ANTIGENS
Definition
Protein or polysaccharide that are recognized as foreign and elicit an immune response; (antagonist) bind to a B cell, that generate a effector cell (antibody factories), which will generate 1000’s of antibody’s, “tags” them for phagocytosis
also Stimulate T-Helper, provides 2nd check or confirmation
Term
Acute bacterial endocarditis
Definition
Staphylococcus aureus from mouth (surgery, dental)
Destroy heart valves, fatal within days
Term
African Trypanosomiasis
Definition
Transmitted from animals to humans by tsetse fly
Parasite evades the antibodies through antigenic variation
Term
Aminoglycosides
Inhibitors of Protein Synthesis
Definition
Aminoglycosides
Interfere with initial steps of protein synthesis
Changes shape of the bacterial ribosome
Streptomycin, Neomycin, Gentamicin
Term
Anti-HIV Drugs:
Definition
Protease inhibitors
Inhibit the enzymes (proteases) that cut up the large viral proteins used for virus packaging
Analogs of amino acids are incorporated into proteins that block protease activity.
Entry inhibitors: Target cell membrane receptors
Fusion or entry inhibitors: Target the fusion of the virus with the cell
Term
Antibiotic
Definition
A substance produced by a microbe that, in small amounts, inhibits another microbe
Term
Antimicrobial drugs
Definition
Interfere with the growth of microbes within a host
Term
Antimycobacterial antibiotics
Definition
Mycobacteria-incorporates mycolic acids in cell wall
Drugs target the synthesis or incorporation of mycolic acid
Term
Antiviral drugs
Definition
Because of the parasitic nature of viruses, targets of antiviral drugs are limited
Nucleoside and nucleotide inhibitors
Treating HIV
Term
BACTEREMIA
Definition
Bacteria in the blood
Term
Bacillus
Definition
cell shape - rod, may be cigar or straw shaped
streptobacillus - chains of rod-shaped bacteria
staphylobacillus - clusters of bacilli
Term
Bacitracin (Polypeptide antibiotics)
Definition
Topical application
Against gram-positives
Inhibits cell wall synthesis at an earlier stage than penicillin
Term
Bacterial Diseases of the Eye
Definition
Conjunctivitis
Ophthalmia neonatorum
Chlamydia trachomatis
Term
Bacterial Meningitis
Definition
Predominately caused by three bacteria
Haemophilus influenzae
Neisseria Meningitis
Streptococcus pneumoniae
and
4) Listeria monocytogenes
Capsule; enters via cerebrospinal fluid
Term
Bactericidal
Definition
Kill microbes directly
Term
Bacteriocins
Definition
Proteins that kill bacteria
Term
Bacteriostatic
Definition
Prevent microbes from growing
Term
Blood brain barrier
Definition
A protective barrier which is designed to keep the environment in the brain as stable as possible. Prevents many serious substances from entering the brain.
Term
Broad spectrum
Definition
Affect a wide range of gram-positive and gram-negative bacteria
Term
CARBOHYDRATE
Definition
Include SUGARS and STARCHES; are building blocks (DNA, cell walls, food. Principle function - fuel cell activities.
C, H, O (H:O, 2:1) ch2o sub n
ribose c12h22o11; glucose c6h12o6; sucrose c12h22o11
Monosaccharides: simple sugars Gluc (sweet) ose (sugar)
Disaccharides: 2 mono’ combine in dehydration synthesis.
Polysaccharides: 10’s or 100’s of monosaccharides joined through dehydration synthesis, with side chains (usually not sweet, and not soluble - like glycogen; cellulose; dextran; chiten; starch
Story - sugars are the fuel source of every cell
Term
CHRONIC
Definition
Develops slowly; long lasting (mono, hep B)
Term
Campylobacter jejuni
Definition
Gram Negative, microaerophilic, spiral Infection
Leading cause of food borne illness in the US
Term
Capsule
Definition
Very organized covering, Glycocalyx, which protects the cell.
Term
Cellular immunity; Cell mediated response
Definition
T - cells mature in Thymus
Helper T cells (Th)
Cytotoxic T-Cells (Tc)
cellular immunity once “infiltrated”, cells or viruses, etc need to be killed; B Cells and T Cells; hanging out in the spleen, marrow and lymph nodes
Term
Characteristics that differentiate prokaryotes from eukaryotes
Definition
(Eu=Neu - nucleus) eukaryotes have
nucleus, membrane bound organelles,
replicates through mitosis (gametes, fertilized egg)
(Pro = pre-nucleus) Prokaryotes have
no nucleus/have a nucleoid structure;
replicate through binary fission
flagellum
pili - transfer of DNA via pili is called conjugation
Term
Chemical requirements for Microbial Growth
Definition
Carbon
Structural organic molecules, energy source
Chemoheterotrophs use organic carbon sources
Autotrophs use CO2
Nitrogen, and phosphorous
In amino acids and proteins
Most bacteria decompose proteins
Some bacteria use NH4+ (organic cellular material) or NO3–
A few bacteria use N2 in nitrogen fixation
Sulfur;
In amino acids, thiamine, and biotin
Most bacteria decompose proteins
Some bacteria use SO42– or H2S
Trace elements
Inorganic elements required in small amounts; Usually as enzyme cofactors; Oxygen; Organic growth factor
Term
Chemotherapy
Definition
The use of drugs to treat a disease
Term
Chlamydia trachomatis
Definition
Causes trachoma
Leading cause of blindness worldwide
Term
Chloramphenicol
Inhibitors of Protein Synthesis
Definition
Chloramphenicol
Broad spectrum
Binds 50S subunit; inhibits peptide bond formation
Easily diffuses into areas of body that are normally inaccessible
Serious side effects limiting use
Term
Clostridium botulinum (Botulism)
Definition
Gram-positive, endospore-forming, obligate anaerobe
Recovery does not confer immunity due to low level of toxin
Botulinal toxin blocks release of neurotransmitter, causing flaccid paralysis
Term
Clostridium difficile
Definition
Gram Positive, endospore forming, exotoxin producing, anaerobe found in healthy adults
Disease occurs as a result of prolonged antibiotic use
Predominately nosocomial disease
Term
Cocci
Definition
Cell shape - spherical shape of bacteria
streptococcus - chains of cocci
staphylococcus - clusters or grapes - of cocci
Term
Combinations of Drugs (Effects)
Definition
Synergism occurs when the effect of two drugs together is greater than the effect of either alone
Antagonism occurs when the effect of two drugs together is less than the effect of either alone
Term
Competitive Inhibitors of metabolite synthesis
Definition
Sulfonamides
Term
Complex LIPID
Definition
Membrane component: adds P, N, S; Phospholipids build membranes; polar and non-polar, orients to a ‘wall’
Term
Corynebacterium diphtheriae
Definition
Gram-positive rod
Toxin produced by lysogenized bacteria
Interferes with protein synthesis

Highly virulent; anti-toxin therapy must be administered prior to infection
Term
Cytoplasm
Definition
“stuff” enclosed by plasma membrane, 80% H2O, proteins, carbs, lipids, ions. “Floats” nucleoid, ribosomes, inclusions.
Term
Cytotoxic T cells
Definition
Kill cells that have gone awry; infiltrator, broken, cancerous, whatever is wrong with them
mature in Thymus
cell mediated response
MHC I presents a warning that the cell is bad - calling in a cytotoxic T-cell strike
also generate into effector cells and cell factories
Dumps porphyrins (proteins that blow up the cell membrane)
Term
DNA polymerase
Definition
Catalyzes the formation of polynucleotides of DNA using an existing strand of DNA as a template.
Any of a class of enzymes involved in synthesizing DNA from precursor molecules.
Any of various enzymes that function in the replication and repair of DNA by catalyzing the linking of dATP, dCTP, dGTP, and dTTP in a specific order, using single-stranded DNA as a template.
Term
Defenses of Human Skin
Definition
Perspiration
Sebum
Term
Defensins
Definition
Protein secreted by phagocytized bacteria, related to activity in Paneth Cells (Large Intestine)
Term
Dental plaque
Definition
Bacteria and dextran, Lactic acid breaks down enamel
Term
Describe cellular respiration GLYCOLYSIS
Definition
Breaking up of sugar
C6H12O6 + 6 O2 -> (cellular respiration) 6 CO2 + 6 H2O + energy
Energy goes to heat and 38 ATP’s
breaks up carbon backbone into 3 C chains (pyruvate)
C-C-C-C-C-C -> C-C-C + C-C-C
needs 2 ATP’s and generates 4 ATP’s; NET 2 ATP’s (anaerobic)
C-C-C chains (pyruvates) enter Krebs Cycle (aerobic) -> generates 2 ATPs
Electron Transport Chain - This is where the most ATPs (Aerobic) are produced - 34 ATP’s
Term
Describe the enteric bacteria and name a couple
Definition
Enterobacteria -terium
rod-shaped Gram-negative bacteria of the family Enterobacteriaceae, as those of the genera Escherichia, Salmonella, and Shigella, occurring normally or pathogenically in the intestines.
Term
Difference between Gram Positive + and Gram Negative - cells walls
Definition
Cell wall structure
Gram Pos cells have a thick peptidoglycan layer
Gram Neg cells have 2 plasma layers, with a thin peptidoglycan layer
Term
Differences between cellular respiration, fermentation and photosynthesis:
Definition
CR - conversion of sugar and O2 into energy, release of CO2;
Fermentation - if there is no O2 - > fermentation occurs, produces alcohol or lactic acid -Method of forming energy from sugar breakdown - no O2, does not use Kreb’s cycle, or Electron Transport Chain, produces small amount of ATP, common product: lactic acid or ethanol
Photosynthesis: conversion of light into energy, in chloroplasts (algae, plants, etc). 6 CO2+ 12 H2O [-] C6H12O6 + 6 H2O + 6 O2
Term
Disease
Definition
Change in the state of health due to the microbe; action that causes something to not work properly in the body
Term
Diseases of Lower Digestive System
Definition
Infection
Intoxication
Gastroenteritis
Treatment: oral rehydration therapy
Term
ENDEMIC
Definition
Always present in a population (prevalence; incidence)
Term
ENTERIC
Definition
Of, relating to, or being within the intestine.
Term
EPIDEMIC
Definition
Many people develop in short time
Term
Endocarditis
Definition
Inflammation of the endocardium
Term
Endospores
Definition
May form when nutrient conditions are low - hardened case, basically “hibernates” until released by improved conditions. Not replication / reproduction. just resting.
Term
Enzymes
Definition
A type of protein, that enhance or speed up a reaction process.
Term
Escherichia coli Enterohemorrhagic EC
Definition
Shiga toxin-producing E. coli (STEC)—STEC may also be referred to as Verocytotoxin-producing E. coli (VTEC) or enterohemorrhagic E. coli (EHEC). Pathotype is most commonly heard about in news about foodborne outbreaks
Primary virulence is from Shiga toxin.
Releases toxin into gut, upon lysis of cell
Antibiotic treatment makes it worse because of cell lysis
Term
Escherichia coli Gastroenteritis (4)
Definition
Enteropathogenic EC
Stimulate host-cell actin to form pedestals beneath attachment site
Term
Escherichia coli Gastroenteritis (4)
Definition
Enteroinvasive EC
Access intestinal submucosa through M cells. Synonymous with Shigella
Term
Escherichia coli Gastroenteritis (4)
Definition
Enteroaggregative EC
Not invasive; enterotoxin causing a watery diarrhea
Term
Escherichia coli Gastroenteritis (4)
Definition
Enterotoxigenic EC
Not invasive; Secrete enterotoxins
One resembles cholera toxin in function
Term
Escherichia coli Pathogenic
Definition
Pathogenic E. coli strains
Six pathotypes are associated with diarrhea and collectively are referred to as diarrheagenic E. coli.
Shiga toxin-producing E. coli (STEC)—STEC may also be referred to as Verocytotoxin-producing E. coli (VTEC) or enterohemorrhagic E. coli (EHEC). This pathotype is the one most commonly heard about in the news in association with foodborne outbreaks.
Enterotoxigenic E. coli (ETEC)
Enteropathogenic E. coli (EPEC)
Enteroaggregative E. coli (EAEC)
Enteroinvasive E. coli (EIEC)
Diffusely adherent E. coli (DAEC)
Term
Etiology
Definition
Cause; name of the microbe;
Term
Exotoxins
Definition
Proteins that disease causing bacteria produce toxins
Term
Feedback inhibition (enzyme)
Definition
Halts enzymatic activity by an end product that “allosterically” inhibits formation of an intermediate product. (Once the end is reached, goes back and stops the reaction)
Term
Fermentation
Definition
Method of forming energy from sugar breakdown - no O2, does not use Kreb’s cycle, or Electron Transport Chain, produces small amount of ATP, common: lactic acid or ethanol
Term
Fimbriae
Definition
Straight appendages; like velcro - help stick to intestine, during flow, for example.
Term
Flagella
Definition
Trichous, provide motility, several structures; special hook, base or basal body, and filament
Term
Function of ATP (Adenosine TriPhosphate)
Definition
Source or currency of biological ENERGY (all life forms)
growth, elec impulses, movement; battery of life
Stored energy -> used energy
A-P-P-P (ATP) +H20 -> A-P-P (ADP) + energy + P
electrons going to lower energy state when Phosphate group ‘pops off’: going from uncomfortable (potential) to comfortable (low potential)
adenosine is made up of adenine (A of DNA base pair) PLUS Ribose (RNA)
Term
Function of B cells
Definition
Generate antibodies
BURSA of fabricius (produced in bone marrow)
Participate in HUMORAL response
membrane bound antibodies (fixed and variable portions)
B Lymphocytes activates, (by T-Helper connecting to MHC II) but only if that particular one has the matching variable part to the virus
if Activated, and same virus also affects T-Helper cells, T-Helper cell generates cytokines; goes to Memory B Cell; and effector cells (factories)
T-Helper - is a double key system helps make sure that the body doesn't attack itself (autoimmune diseases) - likelihood of activation
Effector B cells - “Plasma cells”
Memory B cells
Term
Functions of normal microbiota
Definition
Microbes that are present on / in your body - do NOT cause disease, unless something occurs otherwise (damage or infection)
may serve a function (lactobacillus aid in digestion)
fill a room with good people, then there is no room for ‘bad’ people -
Skin; eyes; upper respiratory tract; mouth; large intestine; urinary and reproductive systems
microbial antagonism - normal can prevent harmful microbes
Opportunistic organisms - part of the normal microbiota, that may take over or cause disease due to certain opportunities (AIDs, HIV)
Term
Gastroenteritis (Lower Intestine)
Definition
Inflammation of stomach and intestinal mucosa: diarrhea, dysentery
Term
Gram Negative Sepsis (Endotoxin)
Definition
Endotoxin shock
Endotoxins cause blood pressure to decrease
Progression to lethal stages
Antibiotics can worsen condition by killing bacteria
225,000 people die of Endotoxin shock every year
Term
Gram Stain mechanism
Definition
Crystal Violet - “gram pos” cells take up the crystal violet stain (purple)
iodine - some function to mordate/fix the color
Ethanol, washes out the color from the “Gram Neg” cells, due to the wall thickness - thin peptidoglycan layer between two plasma layers
Safranin - the safranin stains the gram neg cells (pink or red)
Term
Gram-Positive Sepsis (Staph, Strep)
Definition
Caused by Streptococcal and Staphylococcal
Bacterial components that cause septic shock are unknown
Nosocomial infection
Enterococci are becoming more prevalent as a cause of sepsis
Naturally resistant to penicillin and becoming resistant to vancomycin
Term
HUMORAL immunity (2nd)
Definition
Initial immune response to antigen in the body.
floating around in the body - not inside the cells, but in the fluid
B Lymphocytes (a type of white blood cell, from the bone marrow) connects to virus
B Lymphocytes activates, but only if that particular one has the matching -
if Activated, goes to Memory B Cell; and effector cells (factories)
protein complexes on B Cell;
specific Membrane bound antibodies
Immunoglobulins
variable portion on each part of the protein on each B cell
Term
HUMORAL response
Definition
B cells generate antibodies
B Lymphocytes activates, but only if that particular one has the matching -
if Activated, goes to Memory B Cell; and effector cells (factories)
Term
Haemophilus influenzae
Definition
Cause of Bacterial Meningitis (1/3)
Gram-negative aerobic bacteria, normal throat microbiota
Term
Haemophilus influenzae
Definition
Conjunctivitis
Term
Haemophilus influenzae Pneumonia
Definition
Gram-negative coccobacillus
Gram stain distinguishes from pneumococcal pneumonia
Term
Hepatitis B virus Hepadnaviridae
Definition
1/3 of the world’s population have antibodies against HepBV
Millions are carriers
Many will eventually die of liver disease
Acute HepB: may show symptoms but eventually recover
Chronic: from asymptomatic to death
Term
Hepatitis C virus Filoviridae
Definition
Makes up almost all transfusion transmitted disease
Does not kill the infected cell but induces a immune inflammatory response that either clears virus or destroys liver (scarring of the liver)
Term
Hepatitis Viruses
Definition
A, Picornaviridae
B, Hepadnaviridae
C, Filoviridae
D, Deltaviridae
E Caliciviridae
Term
How do viruses kill their host cells?
Definition
Virus is chain of nucleic acid, in a capsid; 1000’s of types of viruses; doesn’t grow, doesn’t metabolize on its own;
Attaches to a cell, figures a way in - fusing, protein receptors, “trojan horse”, endocytosis “thinks it is food”, innoculate, release genetic material into cell,
RNA starts to ‘replicate’, hijacks the replication process, then RNA replicates and virus itself replicates...cell lyses and then viruses are ‘out there’,
may bud to cell membrane, and take part of the cell membrane with it (protective coat), less foreign looking
Term
INNATE immunity
Definition
Non-specific (attack any invader)
1st (skin) and 2nd line of defense; non-specific reaction (phagocytosis)
Term
Infection
Definition
Entry of pathogenic microbes into the body
Term
Infection (Lower Intestine)
Definition
Growth of a pathogen in intestines
Organisms penetrate intestinal mucosa
Incubation is from 12 hours to 2 weeks
Fever
Term
Influenza
Definition
Hemagglutinin (HA) spikes used for attachment to host cells
Neuraminidase (NA) spikes used to release virus from cell
Antigenic drift
Due to the lack of proofreading ability of RNA viruses
Point mutations in genes encoding HA or NA spikes accumulate and eventually protein no longer an antigen to antibodies from last time
Term
Inhibitors of Cell Wall Synthesis
Antimycobacterial antibiotics
Definition
Opportunistic gram-positive pathogens
MycoBacteria-incorporates mycolic acids in cell wall
Drugs target the synthesis or incorporation of mycolic acid
Term
Inhibitors of Cell Wall Synthesis
Bacitracin
Definition
Polypeptide antibiotics
Bacitracin- Topical application
Against gram-positives
Inhibits cell wall synthesis at an earlier stage than penicillin
Term
Inhibitors of Cell Wall Synthesis
Cephalosporins
Definition
1ST-generation: narrow spectrum; act against gram-positive bacteria
2ND-generation: extended spectrum includes gram-negative bacteria
3RD-generation: includes pseudomonads; injected
4TH-generation: oral
Term
Inhibitors of Cell Wall Synthesis
Natural penicillins
Definition
Extracted from Penicillium, penicillin G (injected)
Penicillin V can be taken orally
Narrow spectrum, staph, strep, spirochetes
Short half-life unless combined with another drug
Susceptible to penicillinase (a β-lactamase) produced by bacteria, particularly staphylococcus
Term
Inhibitors of Cell Wall Synthesis
Penicillin
Definition
All have a common core structure containing a β-lactam ring
Penicillin molecules are differentiated by chemical side chains attached to the lactam ring
Block cross linking of peptidoglycans
Natural penicillins (MORE)
Term
Inhibitors of Cell Wall Synthesis
Vancomycin
Definition
Important “last line” against antibiotic-resistant S. aureus
VRE-vancomycin-resistant enterococci
Opportunistic gram-positive pathogens
Term
Inhibitors of Cell Wall Synthesis (6)
Definition
Penicillin
Semisynthetic Penicillans
Cephalosporins
Polypeptide antibiotics; Bacitracin, Vancomycin
Antimycobacterial antibiotics
Term
Inhibitors of Nucleic Acid Synthesis
Definition
Rifamycin
Quinolones
Fluoroquinolones (Cipro)
Flucytosine
Cytosine analog interferes with RNA synthesis
Fungal cell converts flucytosine to 5 fluorouracil which is incorporated into RNA and disrupts protein synthesis
Term
Inhibitors of Protein Synthesis
Definition
Chloramphenicol
Aminoglycosides
Tetracycline
Term
Intoxication (Lower Intestine)
Definition
Ingestion of a preformed toxin
Symptoms appear quickly after ingestion
No fever
Term
Know what MRSA means and its effect on society
Definition
Methicillin resistant Staphylococcus aureus - a strain that resists antibiotics, and enhances the Staph bacteria’s ability to wreak havoc!
Term
LATENT
Definition
Remains undetected (disease that appears to go away, or does not present)
Term
Laryngitis
Definition
Infection at the site of the larynx. (affects speech)
Term
Latent
Definition
Infection sits “dormant” not expressed, usually no signs or symptoms
Term
Listeria monocytogenes
Definition
Fourth most common cause of meningitis
Caused by Listeria monocytogenes
Gram-negative aerobic rod
Term
Lymphangitis
Definition
Inflamed lymph vessels accompanying septicemia and septic shock
Term
Lysogenic cycle
Definition
Capsule Virion attaches, penetrates (DNA inserted into cell), cell multiplies with viral DNA,
Term
Lysozyme
Definition
Protein secreted by phagocytized bacteria, related to activity in Paneth Cells (Large Intestine)
Term
Lytic cycle
Definition
Virion attaches, penetrates (DNA inserted into cell), biosynthesis (multiplies using cell structures), matures (assembles new virions), then lyses the cell, and escape to infect more cells
Term
M (microfold) cells
Definition
Take up antigen (bacteria or large molecules) from the lumen of the small intestine by endocytosis or phagocytosis
Term
M Cells
Definition
Take up antigen (bacteria or large molecules) from the lumen of the small intestine by endocytosis or phagocytosis
Term
MORBIDITY
Definition
% that die or get sick;
The rate of incidence of a disease.
Term
MORTALITY
Definition
# that die, the number of deaths in a given period
Term
Mechanisms of Resistance
Definition
Ways to mutate or avoid antibiotic action - Gram Neg; penetration resistance, mimicry, camouflage,
Term
Mutation
Definition
Change in DNA due to some outside action, reaction, or a failure of the editing (translation) process
a. A change of the DNA sequence within a gene or chromosome of an organism resulting in the creation of a new character or trait not found in the parental type.
b. The process by which such a change occurs in a chromosome, either through an alteration in the nucleotide sequence of the DNA coding for a gene or through a change in the physical arrangement of a chromosome.
Term
Mycobacterium tuberculosis (Diagnosis)
Definition
Test = Injection of bacterial antigens results in T cell activation and reaction with antigens
Term
Mycobacterium tuberculosis (Etiology)
Definition
Acid-fast rod; transmitted human-to-human;
Cell wall has high lipid content mycolic acids which resist drying and chemical anti-microbials
Term
Mycobacterium tuberculosis (Treatment)
Definition
Treatment: prolonged treatment with multiple antibiotics to minimize drug resistant strains PIERS
Term
Mycobacterium tuberculosis (pathogenesis)
Definition
Bacilli that reach the alveoli of the lung are ingested by macrophages, but often some survive. Infection is present, but no symptoms of disease.
Term
Mycotoxin Intoxications
Definition
Toxins produced by fungi. Cause nervous system disorders, kidney damage, liver damage
Term
NOSOCOMIAL
Definition
Disease or infection obtained through a health care facility
Term
Narrow spectrum
Definition
Limited effectiveness against microbes
Term
Neisseria Meningitis
Definition
Cause of Bacterial Meningitis (2/3)
Gram-negative, aerobic cocci with a capsule
Vaccines directed against capsules produce a poor immune response by memory B cells
Term
Neisseria gonorrhoeae
Definition
Ophthalmia neonatorum
Term
Normal Microbiota
Definition
Large intestine has millions of bacteria: facultative anaerobes
To keep pathogenic bacteria out of small intestine antimicrobial defenses include granule filled Paneth cells
Phagocytize bacteria and secrete proteins called defensins and lysozyme
Term
Normal Microbiota of the Skin
Definition
Gram-positive, salt-tolerant bacteria, resistant to drying
Staphylococci
Micrococci
Diphtheroids
Term
Nucleic acid (DNA) structure
Definition
Double helix structure (ladders AT-CG Adenine Thymine :: Cytosine Guanine);
Plasmid - circular bits of DNA
Term
Nucleic acid (RNA) structure
Definition
single structure (ladders AU-CG Adenine Uracil :: Cytosine Guarine);
mRNA (messenger) part of transcription
Term
Nucleoid
Definition
Contains single, long strand DNA bacterial chromosome
also, small DNA molecules call Plasmids - may be used to replicate (gene manipulation); associated with plasma proteins
Term
OPSONIZATION
Definition
Helping phagocytosis; antibodies tagging a virus for “pickup”; and may glom them together
Term
PANDEMIC
Definition
Epidemic that occurs world-wide
Term
PRIMARY and SECONDARY infections
Definition
primary and secondary infections, initial acute illness, causes weakness that causes secondary infection. Secondary infection could be opportunistic, for example; antibiotics reduce the normal microbiota, allowing 2nd flourishing
Term
PROTEIN
Definition
Component that is most by weight
C, H, O, N, and some- S
Made up of DNA, base pairs (genes) - codes for a particular protein
Enzymes - proteins that speed up reactions
Transporter proteins - move chemicals in / out of cells
active osmosis - proteins use energy to move from high to low concentrations
bacteriocins - kill bacteria
exotoxins - disease causing bacteria produce toxins
Proteins cause muscle movement/contraction
part of cell structures
conduct regulatory functions
Term
Paneth cells
Definition
Antimicrobial defenses keep pathogenic bacteria out of small intestine.
Phagocytize bacteria and secrete proteins called defensins and lysozyme
Term
Pathogenesis
Definition
The way the disease develops; method of infection, action of the bacteria or virus;
Term
Pathology
Definition
pathology: scientific study of disease
Term
Periodontal disease
Definition
Caused by streptococci, actinomycetes, and anaerobic Gram negative bacteria
Term
Periodontal disease
Definition
Caused by streptococci, actinomycetes, and anaerobic gram negative bacteria
Term
Persistent
Definition
The infection continues, despite cure or reduction of antagonist; or recurs
Term
Phagocytes
Definition
Class of cell that can ‘eat’ pathogens
eukaryotic cell
general receptors respond to ‘protein’ in a bacteria, or to a tag from a antibody
engulfs bacteria etc, becomes a phagosome - some lysosymes or reactive O2, dumped into phagosome “digestion
Term
Pharyngitis
Definition
Inflammation of the mucous membranes of the throat (sore throat)
Term
Pili
Definition
Pushed out when needed, are used to transfer DNA between cells - help develop and share DNA changes, such as resistance to an invader, antibiotic, or immune response that attacks it
Term
Plasma membrane
Definition
Protection, selective barrier and selective permeability
Term
Plasmid
Definition
Circular bits of DNA
Term
Plasmids (2nd)
Definition
Mini DNA strands, in the cytoplasm, A circular, double-stranded unit of DNA that replicates within a cell independently of the chromosomal DNA. Plasmids are most often found in bacteria and are used in recombinant DNA research to transfer genes between cells.
Term
Poliomyelitis (Polio)
Definition
Viremia, by ingestion
If persistent, virus can enter CNS, with high affinity for nerve cells of the upper spinal cord which leads to destruction of motor cells and paralysis
99% of those exposed are asymptomatic or sore throat and nausea
Term
Polymerase
Definition
Any of various enzymes, such as DNA polymerase, RNA polymerase, or reverse transcriptase, that catalyze the formation of polynucleotides of DNA or RNA using an existing strand of DNA or RNA as a template.
Term
Protozoan
Definition
Giardiasis Giardia lamblia
Cryptosporidiosis Cryptosporidium hominis
Term
Pseudomonads
Definition
Gram-negative, aerobic rod
Pseudomonas aeruginosa-
Produces various exotoxins
Term
RESERVOIRS, living or inanimate
Definition
Reservoirs (bacterial), living or inanimate (fomite) object; human; animal (zoonoses); non-living (dirt); environment favorable to store, carry or grow bacteria or virus
Term
RNA polymerase
Definition
Catalyzes the formation of polynucleotides of RNA using an existing strand of RNA as a template.
Term
Rabies
Definition
RNA virus with no proof reading capability
Mutant strains develop rapidly
Term
Relationship between antigens and antibodies
Definition
Antigens (antagonist) start the process, antibodies (hero) finish it (if all works well)
Term
Requirements for microbial growth
Definition
Physical, chemical
Physical requirements, T, pH, P
Temperature (range for optimal growth)
pH (range for optimal growth, storage)
\Most bacteria grow between pH 6.5 and 7.5
Molds and yeasts grow between pH 5 and 6
Acidophiles grow in acidic environments
Osmotic pressure (balance for nutrients flow)
Term
Ribosomes
Definition
Site of protein synthesis (more if very active)
Term
SEPSIS
Definition
Toxic inflammatory condition (in the blood)
Systemic inflammatory response
Caused by a focus of infection that releases inflammatory mediators (cytokines) into the blood stream
Term
SKIN (1ST Line, describe)
Definition
1st line of defense: skin cells; Mast cells; dendritic cells (phagocytes); interstitial fluid; capillary/endothelial cells
Term
SPORADIC diseases
Definition
Occurs randomly or occasionally
Term
Salmonella enterica
Definition
Gram Neg, Facultative anaerobe
Infection: Endotoxin
Term
Salmonella enterica
Definition
Salmonellosis
Gram Negative, facultative anaerobe
Infection: Endotoxin
Term
Salmonella typhi
Definition
Typhoid: gram negative, facultative anaerobes, rods
Term
Selective toxicity
Definition
Killing harmful microbes without damaging the host
Term
Septic shock
Definition
Sepsis and uncontrollable decreased blood pressure
Term
Septicemia
Definition
Persistent pathogens or their toxins in blood
Term
Severe sepsis
Definition
Sepsis with decreased blood pressure and single organ failure
Term
Shapes and arrangements of bacteria (3)
Definition
Cocci - spherical
streptococcus - chains of cocci
staphylococcus - clusters or grapes - of cocci
bacillus - rod, may be cigar or straw shaped
streptobacillus - chains of rod-shaped bacteria
staphylobacillus - clusters of bacilli
spirillum - longer rods, that may twist
vibrio - portions of the spiral, like a ‘comma’
spirochetes - longer chain of spirillum, or ‘corkscrew’
Term
Shigellosis (Bacillary Dysentery)
Definition
Shigella spp (sonnei-mild, dystenteriae-severe)
Infection: Endotoxin and Shiga exotoxin
Bacteria proliferate in small intestine and are taken up by M cells in the large intestine
Term
Simple LIPID
Definition
Provides structure:
Hold everything up (structure); C, H, O; nonpolar; insoluble in water
Fats, triglycerides, contain alcohol called glycerol + fatty acids
Glycerol; 3 C + 3 OH -
long chains
1 molecule of glycerol + 1-3 fatty acid molecules
mono-, di- or tri- glyceride
variety of lipid structures
FX: form plasma membranes that enclose cells
allows stuff to pass through
Story - Simple lipids are not limp; they provide structure to the cell, and keep everything from dissolving; 3+3; chain to +1, +2, or +3
Term
Slime Layer
Definition
Glycocalyx is very loosely organized (still sticky)
Term
Spiral
Definition
spirillum - longer twisted shape,
vibrio - portions of the spiral, like a ‘comma’
spirochetes - longer chain of spirillum, or ‘corkscrew’
Term
Spongiform Encephalopathies
Definition
Caused by prions, Typical diseases
Sheep scrapie
Creutzfeldt-Jakob disease
Kuru
Bovine spongiform encephalopathy
Chronic and fatal
Term
Staphylobacillus
Definition
Clusters of bacilli
Term
Staphylococcal Food Poisoning
Definition
Staphylococcus aureus; Enterotoxin Cytotoxic protein exotoxin that targets the intestines, kill cells by altering the membrane permeability of the mucosal epithelial cells of the intestinal wall
Term
Staphylococcal Skin Infections
Definition
Staphylococcus epidermidis (90%)
Staphylococcus aureus
Term
Staphylococcus
Definition
Clusters or grapes - of cocci
Term
Staphylococcus aureus
Definition
Gram-positive, salt-tolerant bacteria, resistant to drying
Staphylococci
Micrococci
Diphtheroids
Term
Staphylococcus epidermidis
Definition
(90%)
Gram-positive cocci, coagulase-negative
Only pathogenic when skin barrier is broken
Term
Streptobacillus
Definition
Chains of rod-shaped bacteria
Term
Streptococcal Pharyngitis
Definition
Streptococcus pyogenes is the only member of group A streptococci
Resistant to phagocytosis

Scarlet fever: Erythrogenic (reddening) toxin produced by lysogenized S. pyogenes
Term
Streptococcal Skin Infections
Definition
a variety of toxins and enzymes
Hemolysins lyse almost any type of cell
The type of hemolysin categorizes the strep into alpha-, beta-, and gamma-(non)hemolytic
Term
Streptococci mutans
Definition
Gram positive cocci, Tooth decay
Bacteria bind to thin film of proteins from saliva and produce dextran from sucrose
Also produce lactic acid from sugar fermentation
Dental plaque = bacteria and dextran
Lactic acid breaks down enamel
Term
Streptococcus
Definition
Chains of cocci
Term
Streptococcus pneumoniae
Definition
Cause of Bacterial Meningitis (3/3)
Gram-positive, capsulated diplococcus
Term
Streptococcus pneumoniae
Definition
Encapsulated diplococci
Diagnosis: optochin-inhibition test or bile solubility test;
serological typing of bacteria
Prevention: pneumococcal vaccine
Term
Streptococcus pyogenes
Definition
Streptococcus pyogenes (most important)
Group A beta-hemolytic streptococci
M proteins-helps strep to evade chemotaxis and killing by neutrophils, and helps the bacteria to adhere to mucous membranes. Determine immunologic types
Hyaluronic acid-forms capsules, poorly immunogenic
Term
Streptokinases
Definition
Lyses clots
Term
Streptolysins
Definition
Cytotoxic for red blood cells, tissue cells, leukocytes
Term
Subacute
Definition
Middle of acute to chronic - odd term for the 'middle'.
Term
Subacute bacterial endocarditis
Definition
Alpha-hemolytic streptococci from mouth
Tooth extractions release bacteria that infect the endocardium
Bacteria lodge in pre-existing lesions resulting from previous disease or abnormalities of the heart
Are protected by blood clots that form around the infection
Heart valve function is eventually impaired, fatal in months
Term
Superinfection
Definition
The overgrowth of some bacteria in the normal microbiota allowing them to become opportunistic pathogens. Results from the use of a broad spectrum antibiotic which kills the competing bacteria.
Term
T-helper cells
Definition
T-helper cells
ALARM of the immune system; 2nd check on B Cell immunity
cell mediated response, mature in Thymus
receptor on T-helper cell binds to specific MHC II (Antigen Presenting Cell Matches)
at some point, the genes for the receptor align with the specific antigen; activates Th.
Dendritic cells are the best at activating the “Naive” Th, (never been touched)
begins to copy, some are effector Th cells; some memory (similar to B Cells)
Releases cytokines (flying squad) (polypeptides - raise the alarm - so that other cells can ‘get in gear’) - can also warn the specific B Cell to replicate more/faster
amplifies the Humoral response
Term
TOXEMIA
Definition
Toxins in the blood
Term
Tetanus
Definition
Gram-positive, endospore-forming, obligate anaerobe. enters via deep wounds
Symptoms are caused by Tetanospasmin, a neurotoxin
Released from dead cells
Enters CNS through peripheral nerves or blood,
blocks relaxation pathway in muscles
Term
Tetracycline
Inhibitors of Protein Synthesis
Definition
Antibiotic that interferes with attachment of tRNA to ribosomes
Prevents attachment of amino acids
Term
Tooth decay
Definition
Streptococci mutans Gram positive cocci
Bacteria bind to thin film of proteins from saliva and produce dextran from sucrose
Also produce lactic acid from sugar fermentation
Dental plaque = bacteria and dextran
Lactic acid breaks down enamel
Term
Transcription
Definition
Unzips, creates mRNA, mRNA, AU-CG, copies, The process by which messenger RNA is synthesized from a DNA template resulting in the transfer of genetic information from the DNA molecule to the messenger RNA.
Term
Translation
Definition
In ribosome, mRNA - tRNA transfers, converts to proteins (building blocks of proteins are amino Acids); creates a copy, spellchecks, edits, and then produces the DNA strand (ends up with original + one copy). The process by which messenger RNA directs the amino acid sequence of a growing polypeptide during protein synthesis
Term
VECTORS
Definition
Spread of disease by insect; mechanical (on the body); biological (through a bite)
Term
VIREMIA
Definition
Virus in the blood
Term
Vancomycin
Definition
Important “last line” against antibiotic-resistant S. aureus

VRE-vancomycin-resistant enterococci
Opportunistic gram-positive pathogens
Term
Vibrio cholerae
Definition
Cholera: slightly curved rod (vibrio), Gram Negative , single polar flagellum
Grow in small intestine, secrete exotoxin
Toxin causes host cells to secrete electrolytes, and water
Loss of fluids causes shock, collapse, and death
Form biofilms and colonize aquatic organisms; Can become dormant in unfavorable conditions; Exceptionally sensitive to stomach acids; Rehydration therapy is highly effective
Term
Viral Diseases of the Skin
Definition
Chickenpox- Varicella-zoster virus (human herpesvirus 3)
Human herpesvirus 1 (HSV-1) and 2 (HSV-2)
Measles (Rubeola)
Rubella (German Measles)
Term
Virulence
Definition
Strength, or number of bacteria required to affect the body and cause disease. A few microbes that cause disease quickly would be very virulent.
Term
Zoonoses
Definition
Animal carrying microbes
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