Term
main properties of?
MTs
Actin
IFs |
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Definition
organelle location and division
locomotion, cytokinesis, exo/endocytosis
strength |
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Term
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Definition
a monomer seq. unit. it binds free tublin therefore taking it out of the reservoir of tublin to grow an MT |
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Term
what can break an MT in the middle? how does it do it? why does it do it? |
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Definition
katanin - it has the ability to hydrolyze ATP. it can increase the rate of MT synthesis by leaving short ends of previous MTs that are starting points for new MTs, or it can start to disessemble them because the cell needs to cut back on its framework. |
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Term
difference btwn taxol and colchicine? |
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Definition
taxol stabilized MTs by binding to monomers that have aggregated. colchecine seq. monomers allowing for disassembly |
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Term
what is the contractile ring that separates cells in division composed of? |
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Definition
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Term
what protein are actin filaments anchored by that assist in fxns like sweeping and and motility? |
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Definition
formin. ARP proteins also serve thing function as they are acitn originating pts |
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Term
what are tropomyosin and cofilin? what's their difference? |
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Definition
they are side binding proteins. tropo stabilizes, cofilin destabilizes. |
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Term
what is the formation of actin? |
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Definition
its "protofilaments" take on a helical formation |
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Term
difference between thymosin and profilin. |
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Definition
thymosin sequesters free monomers therefore stabilizing the growth of actin.
profilin has the opposite effect bc it aids in the addition of free ATP bound monomers |
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Term
what connects lateral sides of cells in reference to the intracellular matrices? |
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Definition
adherent junctions and focal adhesions |
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Term
what can be added to the plus end of an actin filament to stabilize it? |
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Definition
a CapZ capping protein known as Gelsolin. Gelsolin is, however, a member of a larger severing family of proteins. It would require a substantial amount of cytosolic Ca2+ in order to perform its severing fxns |
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Term
actin and intracellular meshwork |
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Definition
on the interior side of the PM, there are adherent junctions and focal adhesions which serve as connection sites for actin internally, but are adhesion site for cell to cell contact on the exterior
cadherins will be connected to these proteins extracellularly and span a protential space until they connect with a neighboring cells. The intracellular tail of the proteins is connected to actin, and is therefore, significanly anchored |
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Term
what commonly transports neurotransmitter containing vesicles? |
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Definition
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Term
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Definition
at desmosomes (cell to cell) and hemidesmosomes (cell to matrix). the filaments at alpha helical. they arrange in tetrametic subunits where two alphahelical stands are lined up, but they are anti parallel to two other monomeric stands with their amino groups facing the other's COOH groups
therefore, lack polarity, can have no motor proteins |
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Term
transmembrane adhesion molecules for IFs |
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Definition
in epithelial cells, they are usually connected to desmosomes through desmolein and desmocollin via kertin fibers
the fibers connected at basil lamina are connected through integrin AB and plectin at hemidesmosomes |
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Term
what can deficiencies in plectin cause? |
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Definition
skin blistering, DMD, and neurodegeneration |
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Term
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Definition
present in all cells, has single head and tail.
the tail may bind a vesicle, the PM, or an organelle |
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Term
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Definition
conventional myosin, found in muscle cells, is a dimer with two heads
each head will attach to different F-actin molecules (at amino head) and the two tails will attache to the two tails of another myosin 2 dimer (at COOH head)
makes contractile activity possible and cytokinesis |
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Term
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Definition
unconventional
double heads bind to actin while the globular tails can bind to a Rab protein on a vesicle. works in vesicle transport and can move in both directions
moves melanosomes |
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Term
what does kinesin and dynein position |
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Definition
kinesin positions the ER while dynein positions the golgi |
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Term
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Definition
provide structural support, seq growth factors, serve as pathways for migration, shape, embryonic development |
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Term
what is 25% of all protein mass composed of? |
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Definition
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Term
how are collagen fibrils strengthened? |
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Definition
covalent cross linkage of lysine residues (highly cross-linked in the achilles tendon). the precursors have propeptides on their ends so that they cannot form INTRAcellular collagen fibers |
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Term
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Definition
sheet-forming collagen, anchoring, fibrillar (rope-like) |
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Term
what is the malfxn in osteogensis imperfecta?
ehlers-danlos syndrome? |
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Definition
weak bones due to a collagen type one mutations
collagen type two mutations causing chondrodyplasias (abnormal cartilege) |
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Term
how are fibrils organized? |
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Definition
by cells with regulate their deposition over the plasma membrane sometimes done so by secretions that mediate their interactions with each other.
skin fibrils are women into a wickwork patter, tendon are organized in parallel bundles, bone and cornea are arranged in an orderly ply-wood style configuration |
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Term
what cells can synthesize elastins? |
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Definition
embryonic and jivenile fibroblasts. this is why cells and tissues become less elastic with age (ie. skin) |
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Term
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Definition
it is a very hydrophobic and is rich in proline and glycine, however, unlike collagen, cannot be glycosylated or hydroxylate lysines.
comes in alternating segments of (1) lysine and alanine a helicial segments and (2) hydrophobic segments
tropoelastin, the elastin precursor, is soluble |
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Term
assembly outside the cell of elastin? |
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Definition
the lysines get widely crosslinked once the elastin precursor has been transported outside the PM. the elastin network then gets covered by MAGPs (microfibril-associated glyxoproteins; such as fibrillin-1 and -2)
deficiencies in formation of fibrillin-1 can lead to marfan's syndrom (lanky with spidery fingers and narrow aorta) |
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Term
what to proteogylcans link to? |
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Definition
polysaccharide chains called glycosaminoglycans (GAGs). this produces very hydrated "ground substances" which embed in collagen and elastin (space is created this way and prevents too tight of packing; also, molecules are able to pass through the ECM with this space created)
these proteins are sythne. by RER and GAGs are assembled on them inside the golgi |
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Term
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Definition
very hydrophilic, negatively charged by carbonyl and sulfate, therefore will attract Na+ which will draw water out extracellularly and take on a very extended conformation
types include:
hyaluronan
chondroitin/dermatan sulfate
heparin
keratan
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Term
proteogylcan of major importance in cartilege? |
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Definition
aggregan; consists of 100 confroitin sulfate chains and about 30 keratan sulfare chains linked to a serine rich core |
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Term
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Definition
single chained proteoglycan secreted by fibroblasts and it decorates surface of collagen fibrils |
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Term
mast cells and proteoglycans? |
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Definition
mast cells package seglycin into secretory granules |
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Term
the proteoglycan syndecan |
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Definition
a transmembrane protein which has extracellular GAGs connected to chondroitin sulfate and haparin sulfate, while its intracellular doman is attached to the actin cytoskeleton.
this positioning allows it to act as a receptor for matrix proteins
they modulate integrin fxn at focal adhesions in fibroblasts and can bind fibroblast growth factors and present them to FGF receptor proteins on the PM of the same cell |
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Term
the perlecan proteoglycan |
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Definition
a heparin sulfate linked proteoglycan which plays a role in the basal lamina of the kidney glomerulus and permits filtration of molecules passing into the urine |
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Term
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Definition
simplest and largest of GAGs with 25,000 repeating dissharide units. it is abundant in early embryos as it plays the role of a space filler during development (almost the size space of an organelle)
also big enough to create a cell free space which allows for the important migration of cells forming the heart and cornea during development
can allow passage of Wharton Jelly |
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Term
purpose of adhesive glycoproteins |
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Definition
help "glue" the ECM to cell. they do so with multiple binding site specific or many components of the ECM |
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Term
the fibronectin gylco-adhesion-protein |
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Definition
has two subunits bound by sulfide bonds. the two subunits have sollagen bind, cell bind, heparin binding domains. each domain has "modules" too. The main ones in fibronectin binds to integrin. basically it can just glue everything together
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Term
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Definition
these are found on the interior of the cell and are attached to actin. actin helps influence fibronectin orientation and can pull on the fibronectin until they begin to display a cryptic domain allowing them to bind to each other (sometimes disabled in cancer cells allowing them to break apart from each other and metastasis).
this fibronectin/fibril relationship can be inhibited by uteroglobulin in the kidney |
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Term
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Definition
a large protein that can self-assemble in vast 2D networks. very important component of basal lamina. the laminin can bind to perlecan type IV collagen, and nidogen and holds all the components of the basal lamina together making a nice sheet.
it is also capable of signaling down an integrin to stimulate things such as cell proliferation. |
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Term
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Definition
the ECM has to be able to turnover and deconstruct in response to events such as the need for cell migration, infection, injury, tissue remodeling.
this is done by extracellular proteases. in normal tissues, this happens slow and naturally, and continuously
there are two classes of these protease, metalloproteases (MMPs) and serine proteases (some members are chymotrypsin, tyrpsi, elastase).
most components mentioned are degraded extracellularly, but proteoglycans and hyalauronans under endocytosed and brought to lysosomes for degradation |
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Term
basal lamina following cell degeneration? |
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Definition
the exterior framework of the basal lamina can be retained even as the cells has been destroyed. This can be a placeholder for a future cell of the same type to form at. a nerve cell wont be able to regenerate, but the synaptic path that previously existed will be reconstructed |
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Term
The action of proteases is restricted by protease inhibitors:
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Definition
1)tissue inhibitors of metalloproteases (TIMPs)
2)serine protease inhibitors (serpins) |
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Term
tissues can begin to from floating single cells thanks to organization performed by the ECM |
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Definition
integrin can stimulate the ECM of other cells it comes in contact with and can propogate orginization with any cells in the vacinity if its environment demands it to do so.
this is also beneficial to the cells that were floating around because many need to be attached to survive (known as anchorage dependence). binding causes vital signal transduction
fibronectin as well as integrin are very important in this process |
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Term
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Definition
cells may need to perform locomotion in order to find other cells in which to associate their ECM with. Actin will play the major role in this, as per usual, but proteins like fibronectin can also help.
they help by forming adhesions as it moves to find a cell to associate with |
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Term
Basal lamina is synthesized by :
help it to determine:
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Definition
the cells that rest on it
cell polarity,
influence cell metabolism,
organize the proteins in adjacent plasma membrane,
promote cell survival,
proliferation,
differentiation,
serve as specific highways for cell migration.
mature basil lamina contain type IV collagen |
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Term
ATM gene, presentation, purpose |
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Definition
spidery red veins, sensed DNA action codes for it and it activates p53 |
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Term
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Definition
p53 is a tumor supressor gene that is activated by ATM and when it is prosphorylated it activated the transcription of p21, which then in turn arrests the cell cycle |
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Term
what does ___ do?
MYC
HER2/neu
BCL2 |
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Definition
it is a transcription regulator
activates EGFR
anti-apototic gene |
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Term
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Definition
It is usually usually bound to E2F. which it is phosphorylated, it is inactivated and releases permitting passage through the cell division cycle. This is fine when it gets controlled natural signals, but mutations will cause it to be inactive most of the time and, thus, no longer controlling cell division |
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