Term
Components of receptor complex |
|
Definition
|
|
Term
components of TCR signaling complex |
|
Definition
CD3 complex TCR alpha/beta
All associated with motifs called ITAM's |
|
|
Term
|
Definition
Components of CD3 in B cell- Ig alpha and beta (associated with ITAM) |
|
|
Term
Process of activating ITAM's |
|
Definition
ligand binds phosphorylation of ITAM's by src family kinases phosphorylated ITAM's recruit other Tyr kinases and addaptor proteins this forms macromolecular signaling complex
|
|
|
Term
Cells that contain ITAM's |
|
Definition
BCR TCR NK cells macrophages neutrophils mast cells basophils
|
|
|
Term
Functional advantage of receptor associated tyrosine kinases |
|
Definition
allows flexibility of response due to major variations in quantity and quality of second messanger generation |
|
|
Term
Methods to regulate formation of signaling macromolecular complexes |
|
Definition
protein protein interactions cytoskeletal interactions segregation into lipid raft membrane microdomains
|
|
|
Term
Process of protein protein interaction |
|
Definition
use SH2, SH3 ligand binding clusters receptors, activating Tyr kinases leading to phosphorylation of receptor cytoplasmic domains adaptor proteins bind to phosphotyrosine via their S2 domains other signaling proteins bind to adaptor protein via Proline-rich sequences, becoming concentrated around activated receptor
|
|
|
Term
Protein protein interactions mediated by what within the signaling molecules? |
|
Definition
|
|
Term
Mechanism of phopshorylation of scaffolding prtoeins |
|
Definition
phosphorylation of scaffolding protein leads to recruit signaling proteins that bind to it |
|
|
Term
Structure of lipid rafts. Contents? |
|
Definition
structure enriched for saturaed lipids and cholesterol can change in size and protein content allow for proteins to migrate into lipid rafts when oligomerized by binding ligands
contents
|
|
|
Term
How does an immunological synapse form? |
|
Definition
microclusters of TCR complexes form right after MHC-peptide binding gradually coalesce into central aggregate signal transduction initiated in microclusters within seconds of ligand recognition
|
|
|
Term
|
Definition
|
|
Term
|
Definition
|
|
Term
Process of TCR activation in co-receptors |
|
Definition
binding of ligand to receptor phosphorylation of ITAM by receptor associated kinases ZAP bind to phosphorylated ITAM chaim ZAP is phosphorylated and activated by Lck when co-receptor binds to MHC ligand
|
|
|
Term
Process of co-receptor activation of BCR |
|
Definition
CD21 binds to CD3 tagged antigens to allow for co-receptor to cluster with antigen receptors co-ligation of coreceptor allows receptor associated kinases of phosphorylated CD19 phosphorylated CD19 bind src family and PI-3 kinases PI-3 kinase initiages signaling path to involve GEF protein (vav)
|
|
|
Term
Components of src gene/receptor |
|
Definition
SH3 domain SH2 domain kinase domain (activating, inhibitory residues) |
|
|
Term
Enzymes the regulates src family kinases |
|
Definition
|
|
Term
How do src family tyrosine kinases know to phosphorylate ITAM's after antigen recognition? |
|
Definition
recruitment of constitutively active kinases to antigen R by co-receptors mobilization of antigen receptor to lipid raft domains after ligand binding promotes access to src family Tyr kinases (SFK's) conformational change of antigen receptor complex upon ligand binding exposes ITAM's to SFK's
|
|
|
Term
Role of CD45 in activating T cell |
|
Definition
stimulate phosphatases that will activate Lck and Fyn (receptor associated tyrosine kinases), which contain tyrosine kinase activity that will produce GEF and PLC |
|
|
Term
|
Definition
CD45 phosphatase activate receptor associated tyrosine kinases stimulate Syk (tyrosine kinase) binds to phosphorylated Igβ and become activated activated kinases activate CD19, PLC, GEF's
|
|
|
Term
Role of PLC in signal cascade |
|
Definition
cleave PIP2 into IP3 and DAG DAG and calcium activate PKC, which activates NFkB IP3 incrases intracellular calcium, activating calcineurin (phosphatase) calcineurin activate NFAT (transcription factor) NKkB and NFAT act to induce specific gene transcription, leading to cell proliferation and differentiation
|
|
|
Term
Role of GEF's in signaling cascade |
|
Definition
GEF's activation of small G proteins ex: Ras and Rac (bind GTP)
small G proteins activate MAP kinase cascade Ras-induced kinase cascade induces and activates Fos (component of AP-1) transcription factor induces specific gene transcription, leading to cell proliferation and differentiation
|
|
|
Term
Mechanism of action of cyclosporin |
|
Definition
blocks the transcription of calcineurium, which will dephosphorylate NFAT If NFAT still has its phosphates attached, it wont be active
|
|
|
Term
|
Definition
Recruit phosphatases tp membrane associated immunoreceptors that can inhibit tyrosine kinase based activation pathways. |
|
|
Term
Two main ways to inactivate receptor cascades |
|
Definition
|
|
Term
Enzyme that degrades signaling proteins? What happens if this enzyme is not active enough? |
|
Definition
|
|
Term
Various cell to cell interactions that can regulate activation of immune cell cascades |
|
Definition
|
|
Term
Costimulatory signals seen in naive T cells |
|
Definition
CD28 interacts with B7 to promote: cell survival/protect from apoptosis IL-2 production leading to proliferation cytoskeletal rearrangements, raft recruitment
|
|
|
Term
Signals delivered by APC that affect T cell activation |
|
Definition
activation survival differentiation
|
|
|
Term
Describe the phenomenon of inside out signalling that occurs in T cells |
|
Definition
T cell initally binds APC thru low affinity LFA-ICAM interactions subsequent binding of TCR's signals LFA via adhesion and degranulation adaptor protein (ADAP) conformational changes in LFA increase affinity and prolongs cell-cell contact
|
|
|
Term
Role of CD40 in signal transduction |
|
Definition
ALSO gets help from T cell derived cytokines |
|
|
Term
How are cytokines and chemokines receptors grouped into superfamilies? |
|
Definition
based on structural similarities |
|
|
Term
mechanism of action of JAK/STAT signaling pathway in cytokine receptor signaling |
|
Definition
cytokine binding dimerize receptor, bringing together cytoplasmic JAK's which activate each other and phosphorylate the receptor TF's (STATS) bind to phosphorylated receptors, and are in turn phosphorylated by activated JAK's phosphorylated STATs form dimers that translocate into nucleus to initate new gene transcription
|
|
|
Term
What popular mechanism do chemokine receptors use when activated? |
|
Definition
G protein coupled mechanism |
|
|