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Honors Biology Ch 3
Chapter 3 Vocab
53
Biology
9th Grade
09/25/2011

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Term
Carbon has how many valence electrons?
Definition
4
Term
What are the shapes of carbon atoms?
Definition
Branched chains, rings, sheets, and helics
Term
Functional groups
Definition
Groups of atoms that help determine the characteristics and chemical reactivity of the molecules.
Term
Functional groups
Definition
Groups of atoms that help determine the characteristics and chemical reactivity of the molecules.
Term
Carboxyl
Definition
-COOH
Polar
Found in fatty acids and amino acids
Term
Amino
Definition
-NH2
Polar
Found in Amino acids
Term
Hydroxyl
Definition
-O-H
Polar
Found in glycerol, glucose, and fructose. Steroids too
Term
Carbonyl
Definition
-C=O
Polar
Found in sugars, hormones, vitamins
Term
Sulfhydryl
Definition
-S-H
Polar
Forms disulfide bonds in proteins
Found in amino acids and proteins
Term
Phosphate
Definition
PO4
nonpolar
Found in lipids and fatty acids
Term
Monomers
Definition
Individual subunits
Term
Polymers
Definition
Chains of monomers
Term
Dehydration synthesis
Definition
A chemical reaction in which two molecules are joined by a covalent bond with the simultaneous removal of a hydrogen from one molecule and a hydroxyl group from the other, forming water, reverse of hydrolosis. The purpose is to remove a hydrogen ion from one subunit and a hydroxyl from a second. This forms a water molecule and a covalent bond that links them.
Term
Hydrolysis
Definition
Splits the molecule back into its subunits. Water gives one hydrogen ion to one subunit and a hydroxyl ion to the other.
Term
Four Main Categories of biological molecules
Definition
Carbohydrates, Lipids, Proteins, and Nucleotides/Nucleic Acids
Term
Carbohydrates:
Definition
Made of carbon, oxygen, and hydrogen
1:2:1
Sugars
Monosaccharides-one sugar; disaccharides-2 monos bonded together; polysaccharide-chain of monosaccharides.
Functions: energy source for cells; subunit of polysaccharides, energy storage
Polar
Monomer unit: glucose, ribose, and deoxyribose
Term
Three monosaccharides that have formula C6H12O6
Definition
Glucose, fructose, and galactose
Term
Glucose
Definition
Most common in living organisms and is an important energy source for cells and a subunit of polysaccharides.
Term
Two most common monsaccharides that contain five carbons
Definition
Ribose and deoxyribose-ribose found in RNA and deoxyribose found in DNA
Term
Three types of disaccharides
Definition
Sucrose, lactose, and maltose.
Term
Chemical formula for a disaccharide
Definition
(CH2O)n
Term
Starch
Definition
Long-term energy storage
Found in seeds and roots of plants
Branched chains of up to 0.5 million; all glucose subunits oriented in the same direction
Term
Glycogen
Definition
Long-term energy storage
Found in liver and muscles of animals
A chain of glucose subunits, more highly branched than starch but also a chain of glucose subunits
Term
Cellulose
Definition
Forms the cell wall that surrounds each plant cell, the fluffy bolls of cotton plants, and half of the bulk of tree trunks. Protects any vertebrate enzyme from attacking.
Found in cell walls of plants, tree trunks, cotton bolls
Every other glucose is "upside down". Composed of glucose subunits.
Term
Chitin
Definition
Stiffens cell walls of fungi and forms of exoskeletons of insects, spiders, etc.
Some bonding as glucose, but instead the glucose subunits have a nitrogen containing functional group instead of a hydroxyl group
Found in cell walls of fungi and exoskeletons of insects, etc.
Term
Three Major classifications of lipids
Definition
oils, fats, and waxes
Term
Fatty acid
Definition
Long chain of carbon and hydrogen with a carboxylic acid group (-COOH) at one end.
Term
Difference between calories/gram stored in fats/oils compared to sugars/proteins
Definition
Fats: 9 cal/gram
Carbs/Protein: 4 cal/gram
Term
Fats, Oils and waxes (chart)
Definition
Elements: carbon, hydrogen, oxygen
Ratio: large amounts of carbon and hydrogen, very few oxygen
Polarity: nonpolar/nonsoluable
Polymer unit-triglyceride-3 fatty acids with a glucose
Monomer unit-one glycerol
Functions of fats: energy storage
Oils: energy storage
waxes: waterproof coating for stems/leaves of plants
Term
Formation of triglycerides
Definition
Dehydration synthesis links a single glycerol molecule with three fatty acids to form a triglyceride and 3 water molecules
Term
Functional groups involved in the synthesis of triglycerides:
Definition
Hydroxyl and carboxyl
Term
Saturated fats:
Definition
C-C bond: no double C (O=C-C-C-C)
Shape: Straight and molecules close together
Physical state at room temp: solid lump
Ex: fat, butter
Term
Unsaturated Fats:
Definition
C-C bond: (C-C=C-C)
Shape: with kinks
Physical state: liquid
Ex: oil
Term
What two categories of lipids are important in cell membranes:
Definition
Phospholipids and cholesterols
Term
Proteins/Function
Definition
Molecules composed of one or more chains of amino acids. Their functions are structural movement, defense, storage, signalizing, and catalyzing reactions.
Term
Monomer unit of proteins
Definition
Amino acids
Term
Fundamental structure of ALL amino acids
Definition
Central carbon bonded with three different functional groups-a nitrogen amino group (-NH2) a caboxylic acid group (-COOH)and an "R" group that varies among amino acids
Term
What is the variable "R" group on an amino acid?
Definition
It varies among different amino acids. It also gives each amino acid unique properties and determines if the amino acid is hydrophilic or hydrophobic.
Term
How are proteins formed? (process and explanation of which functional groups are involved)
Definition
Dehydration synthesis-the nitrogen amino group of the amino acid is joined to a carbon in the carboxylic acid group by a single covalent bond called a peptide bond.
Term
Peptide bond
Definition
The bond that forms between amino acids in a protein
Term
Proteins/Polypeptides (# of amino acids)
Definition
Chains of 50+ amino acids
Term
Peptide (number of amino acids)
Definition
shorter chains (50-)
Term
Primary
Definition
The sequence of amino acids linked by peptide bonds which hold it together
Term
Secondary
Definition
Helix-spring like secondary structure-Hydrogen bonds between polar portions of the amino acids hold it together. Hydrogen bonds formed between the oxygens of the carbonyl functional groups (negative charges) and the hydrogens of the amino funtional groups (positive charges) hold the turns of the coils together
Term
Tertiary
Definition
Folding of the helix-resulting in hydrogen bonds with surrounding water molecules.
Hydrophillic amino acids exposed and hydrophibic around the center of the molecule.
Term
Quaternary
Definition
Individual polypeptides are linked together by hydrogen bonds or disulfide bridges.
Hydrogen bonds, disulfide bonds, or attractions between oppositely charged portions of different amino acids hold it together.
Term
What determines the structure and function of a protein?
Definition
The exact type, position, and number of amino acids bearing specific R groups determines the structure and function.
Term
What does it mean for a protein to be denatured?
Definition
It means that the protein's secondary, tertiary, or quaternary structures are altered while leaving the primary structure intact. It has different properties and will not perform its function. heat, ultraviolet rays, or solutions that are salty or acidic can cause this to occur.
Term
Nucleotides
Definition
Molecules with a three-part structure: a five-carbon sugar, a phospyhate functional group, and a nitrogen containing base that differs among nucleotides. ex: DNA, RNA, ATP
Term
What is the functions of nucleotides in a cell?
Definition
ATP carries energy from place to place within a cell, storing the energy in bonds between nits phosphate groups. NAD+ and FAD transport energy in the form of high-energy electrons.
Term
What are nucleic acids?
Definition
Nucleic acids are organic molecules composed of nucleotide subunits (RNA/DNA). They are long chains (polymers) of nucleotides. One nucleotide is covalently bonded to the sugar of the next (how it is synthesized).
Term
What does DNA serve in cells?
Definition
Spells out genetic information needed to construct the proteins of each organism
Term
What does RNA do?
Definition
Directs the synthesis of proteins
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