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Genetics 1
1
96
Biology
Undergraduate 3
01/24/2007

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Term
define genome
Definition
the entire genetic complement of a cell or organism
Term
define homologous chromosome
Definition
member of a pair of chromosomes in a diploid organism
Term
approximately how many genes are there in the human genome?
Definition
35,000
Term
what traits must any hereditary molecule have?
Definition
1. ability to hold information
2. ability to replicate
3. ability to change over time
Term
what is the name for the synthesis of a protein from mRNA?
Definition
translation
Term
what is the genetic code?
Definition
the table/dictionary that relates codons to amino acids
Term
how can 2 cells with the same genotype be phenotypically different(eg. nerve cell and bone cell)?
Definition
regulatory regions of DNA cause diff. sections to be expressed
Term
define polymorphism
Definition
when more than one allele is present in a population. 'many-forms'
Term
explain how the lactose operon is turned on/off.
Definition
normal function produces a repressor protein that blocks ribosome from transcribing lactase genes. when lactose is present, it binds to the repressor protein, releasing it from the DNA and allowing transcription
Term
what is the wild type variant of an allele?
Definition
the normal/most common type found in nature
Term
what is the name for a mutant type allele that produces a non-functioning protein?
Definition
null allele
Term
define norm of reaction
Definition
the range of phenotypes seen in a given genotype in a range of normal environments
Term
what is the name given to small, random variation in phenotype due to small random effects on development
Definition
developmental noise
Term
what is the process for completing genetic/mutational dissection?
Definition
1.isolate mutant form deficient in process
2.characterize the mutation(gene-protein)
3.repeat until all components are identified
4.piece total process together
Term
what are the four premises of natural selection?
Definition
1.individuals vary2.some variation is heritable
3.new variation arises by mutation
4.some variants survive to reproduce better than others
Term
define gene in terms of mRNA
Definition
the section of a chromosome that produces a functional mRNA transcript
Term
what did avery prove? what year?
Definition
that dna, not protein or RNA, is the heritable molecule
1944
Term
what were the 4 clues Watson and Crick had to work with to discover the structure of DNA?
Definition
1.DNA is long polymer of nucleotides
2.there are 4 types of nubleotides
3.A=T, C=G
4.x-ray diffraction image
Term
who discovered that the amount of adenine = thymine and cytosine = guanine in cells?
Definition
Chargraff
Term
what did Rosalind Franklins x-ray diffraction images of crystallized DNA show?
Definition
that it is a helical molecule with specific spacings and repetitions
Term
what is the name for the bond between phosphate and deoxyribose in DNA?
Definition
phosphodiester bond
Term
how many hydrogen bonds connect adenine to thymine?
Definition
2
Term
how many hydrogen bonds join cytosine to guanine?
Definition
3
Term
what 4 structural elements of DNA did the watson and crick paper address?
Definition
1.structure of a nucleotide
2.structure of single strand
3.structure of double strand
4.structre of double helix
Term
which carbon of the sugar backbone do the nucleotide bases attach?
Definition
the 1' carbon
Term
what is the name for DNA segments between genes? what do they consist of?
Definition
intergeneic space
repetitive dna and
mobile genetic units
Term
why are plant genomes often so much larger than the human genome?
Definition
capable of polyploidy
Term
approximately how many nucleotides are in the human genome? how many kb? how many genes?
Definition
3 billion nucleotides
3 million kb
35,000 genes
Term
what is the approximate size of a plasmid genome?
Definition
10-100 kb
Term
what is the arrangement of DNA in chloroplasts/mitochondria?
Definition
circular
Term
what is the approximate size of a chloroplast/mitochondria genome?
Definition
10-100 kb
Term
where in a human cell could you find multiple (>2) copies of the same dna (other than during mitosis/meiosis)
Definition
in mitochondria (and chloroplasts in plants)
Term
how big are viral genomes?
Definition
100s of kb
Term
what is the structural arrangement of nucleic acid in a virus? what type?
Definition
single or double stranded
DNA or RNA
Term
how big are prokaryote genomes?
Definition
1000-5000 kb
Term
where can operons be found?
Definition
prokaryote genomes
Term
what are the charachteristics of an operon?
Definition
1. set of 3 genes w/similar functions
2. adjacent on chromosome
3. transcribed together
Term
what is the end segment of a chromsosme called?
Definition
telomere
Term
what is the name for the point on a chromosome where the spindle attaches?
Definition
centromere
Term
what 3 terms are used to describe the way homologous chromosomes are attached after replicating?
Definition
telocentric
metacentric
acrocentric
Term
what is the centromeric index?
Definition
the % of the csome length that exists on the 'small arm' side of the centromere
Term
how would the nuclear organizer be identified on a csome?
Definition
would be seen as a constriction
Term
what are thickening in a chromosome called?
Definition
chromomeres
Term
what are darkly staining, non-coding regions of a csome called?
Definition
heterochromatin
Term
what are the lightly staining, gene-containing regions of csomes called?
Definition
euchromatin
Term
what type of organisms have polytene csomes? where specifically in the organism?
Definition
Order Diptera (flies)
in secretory glands
Term
what is endomitosis?
Definition
when csomes replicate, but don't divide (as with polytene csomes)
Term
what is synapsis?
Definition
the process by which homologous csomes pair up
Term
give 2 instances where synapsis can be observed?
Definition
in meiosis I of eukaryotes
in polytene csomes of Diptera
Term
what is the central point where the csomes of polytene csomes connect?
Definition
chromocenter
Term
what is the very general description of how dna is packed into a csome?
Definition
coil - coil - fold - coil
Term
T/F - there is a surprising similarity between genomes of all organisms (yeast - humans)
Definition
true
Term
what are the 3 main differences between RNA and DNA?
Definition
1. single stranded
2. ribose sugar instead of deoxyribose
3. Uracil replaces Thymine
Term
what is the differnce between ribose and deoxyribose?
Definition
ribose - OH at 2' carbon
deoxyribose - H at 2' carbon
Term
name 5 types of RNA
Definition
messenger (mRNA)
transfer (tRNA)
ribosomal (rRNA)
small cytoplasmic (scRNA)
small nuclear (snRNA)
Term
what enzyme facilitates transcription?
Definition
RNA polymerase
Term
what end of the DNA template strand does the RNA polymerase attach?
Definition
3' end
Term
what end of and RNA transcript is made first?
Definition
5' end
Term
what direction is RNA sythesized?
Definition
5'-3'
Term
what direction are all nucleic acids synthesized?
Definition
5'-3'
Term
what is a transcription bubble?
Definition
the section of dna where strands are seperated for RNA polymerase ro transcribe RNA
Term
in what form are nucleotides when they are added to an RNA strand?
Definition
triphosphate
Term
which end of the dna nucleotide is the phosphate group attached?
Definition
5'
Term
what region of dna binds RNA polymerase to initiate transcription?
Definition
promoter
Term
what regions of DNA associated with transcription are highly conserved between all organisms?
Definition
promoter regions
Term
what is the name of a structure commonly created at the end of a transcript to prompt seperation of the RNA strand?
Definition
hairpin loop structure
Term
what is the name of RNA before it is 'processed'?
Definition
primary transcript
Term
what 3 things happen to a primary RNA transcript during 'processing'?
Definition
1. 7-methylguanosine cap added to 5' end
2. poly-a tail added to 3' end
3. introns removed
Term
what structure facilitates intron removal?
Definition
spliceosome
Term
what are the 2 general components of a spliceosome?
Definition
protein and small nuclear RNA (snRNA)
Term
what is added to the 5' end of and RNA transcript during processing?
Definition
7-methylguanosine cap
Term
what is added to the 3' end of an RNA transcript during processing?
Definition
a chain of adenosines (poly-A tail)
Term
what are the 5 parts of an amino acid?
Definition
carbon (C)
amine group (NH2)
carboxyl group (COOH)
hydrogen (H)
functional group (R)
Term
how does a peptide bond occur?
Definition
OH in the carboxyl of one amino acid and the H in the amine of another amino acid break off as H2O leaving C-N bond
Term
through what process does a peptide bond occur?
Definition
dehydration synthesis
Term
how many amino acids are found naturally in proteins?
Definition
20
Term
what degree of protein structure dictates the proteins shape and function?
Definition
primary structure
Term
how many codons are possible in mRNA?
Definition
64
Term
what structures determine the dictionary of the genetic code (other than DNA)?
Definition
the tRNA molecules
Term
what are the 2 characteristics of the genetic code stressed in class?
Definition
1. it is virtually universal
2. it is degenerate
Term
explain how the genetic code is degenerate?
Definition
64 codons have 21 meanings
Term
what is abbreviated breakdown of the 20 amino acids?
Definition
4A - 3TG - 2LP - VCHIMS
Term
what aa starts with v?
Definition
valine
Term
what aa starts with c?
Definition
cysteine
Term
what aa starts with H?
Definition
histidine
Term
what aa starts with I?
Definition
Isoleucine
Term
what aa starts with M?
Definition
methionine
Term
what aa starts with S?
Definition
Serine
Term
what 2aa start with P?
Definition
proline
phenylalanine
Term
what 2 aa start with L?
Definition
Leucine
Lysine
Term
what 3 aa start with G?
Definition
glutamic acid
glutamine
glycine
Term
what 3 aa start with T?
Definition
Threonine
tryptophan
tyrosine
Term
what 4 aa start with A?
Definition
alanine
arginine
asparagine
aspartic acid
Term
where would you find inosine?
Definition
at the 5'end of an anticodon
Term
does the wobble effect mean that 1 tRNA can attach to multiple mRNA or that 1 mRNA can attach to multiple tRNA?
Definition
tRNA matches can match with multiple mRNA
Term
match the following 5' ends of an anticodon w/possible mRNA complements.
G, U, I, A, C,
Definition
G - C/U
U - A/G
I - U/C/A
A - U
C - G
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