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Fragile X Workshop
Chubinskaya
14
Biochemistry
Professional
10/09/2011

Additional Biochemistry Flashcards

 


 

Cards

Term

 

 

 

 

Fragile X mutation

Definition

 

 

 

CGG expansion in 5' regulatory region of FMR1 gene on X chromosome

 

Xq27.3

Term

 

 

 

Epigenetics

Definition

 

 

 

inherited changes in phenotype caused by mechanisms OTHER than changes in underlying DNA sequece

Term

 

 

 

normal CGG repeat number

Definition

 

 

6-52

polymorphic

Term

 

 

 

full mutation

Definition

 

 

repeat expansion >230 copies-->methylation/hypermethylation of CpG Island-->gene shut off

 

all males and half of females with full mutation are mentally retarded

Term

 

 

 

 

premutation

Definition

 

 

 

copy # 50-230

 

not methylated, therefore FMR1 is transcriptionally active

no phenotypic abnormalities

Term

 

 

 

 

Martin-Bell syndrome

Definition

 

 

triad of signs:

mental retardation

long face w large everted ears

macro-orchidism

Term

 

 

 

 

Full mutation transmitted through male

Definition

 

 

unaffected sons

 

 

daughters have premutation

Term

 

 

 

 Premutation transmitted through mother

Definition

 

daughters 50% normal, 50% premutation or full mutation (expansion when passed by mother)

 

sons: 50% normal, 50% premutation or full mutation (more likely than daughters to receive FULL mutation)

Term

 

 

 

full mutation transmitted by mother

Definition

 

50% normal, 50% full mutation

Term

 

 

 

premutation transmitted by father

Definition

 

 

sons: normal

 

daughters: usually show reduced number of repeats

Term

 

 

 

 

Sherman paradox

Definition

 

aka DNA instability, dynamic mutations

 

males do not transmit more than 230 copies, females often transmit more copies than they have

 

premutations larger than 80 almost always expand to full when passed through mothers

 

*Var related to premutation size and carrier's gender

Term

 

 

 

molecular diagnosis of Fragile X

Definition

 

 

Southern blot/PCR

 

restriction endonucleases (EcoR1, Eag 1, BssHII, PstI, XhoI) and probes (Pfxa3 & StB12.3)

 

methylation-sensitive restrictino endonucleases cut within CGG island

Term

 

 

 

Southern blot results for Fragile X testing

Definition

 

normal F: 5.2 (inactive X), 2.8, 2.4

normal M: 2.8

 

premutation F: normal plus 2 additional bands

premutation M: slightly larger than 2.8

 

full mutation F: smear band in excess of 5.7

full mutation M: band larger than 5.2

Term

 

 

 

 

therapy for Fragile X patients

Definition

 

 

none

 

treat behavioral/learning/OT problems

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