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final exam
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89
Immunology
Undergraduate 4
12/23/2014

Additional Immunology Flashcards

 


 

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Term
3 phagocytes
Definition
neutrophils, macrophages, eosinophils, dendritic cells, mast cells
Term
granule release cells (6)
Definition
cytotoxic T cells (CD8), NK cells, neutrophils, eosinophils, basophils, mast cells
Term
which cells can release granules?
Definition
most cells, but Thelper (CD4), macrophils, and basophils are especially good at it
Term
Fas-FasL
Definition
induce cell death in cells inducing foreign antigen and also for T cell homeostasis
Term
granuleocytes
Definition
neutrophils, eosinophils, basophils, mast cells
Term
cytokines are induced by
Definition
oxidative stress
Term
what is phagocytosis triggered by?
Definition
PAMPs (pathogen associated molecular proteins), or antibodies/CD3 (opsonins)
Term
how do mast cells recognize thier targets?
Definition
they hold on to IgE, which grabs the pathogen
Term
how do antibodies induce phagocytosis through the Fc receptors?
Definition
antibodies coat the pathogen, and phagocytes have Fc receptors that recognize them and therefore grab that pathogen and eat it.
Term
what happens when antibodies bind to mast cells?
Definition
they induce cytokine release through IgE receptors. Whatever is attracted by these cytokines releases histamine granules.
Term
what are four ways antibodies can deal with extracellular bacteria/fungi?
Definition
1. coat pathogen to induce phagocytosis through Fc receptors
2. can trigger classical pathway of complement (antibody bound to pathogen results in C3b coating)
- inactivation of the pathogen
- antibody-dependant cell mediated cytotoxicity (ADCC) which is when the antibody coating attracts usually an NK cell through Fc receptors and it gets destroyed directly with cytotoxic antibodies
Term
in the case of an intracellular bacteria or fungi, what is a cell-intrinsic effector?
Definition
caused by cytokines; this is when the cell itself is able to shut down or apoptose or release antibacterial effectors on itself
Term
if a cell is infected with intracellular bacteria and fungi, it will start expressing Fas. What interacts with Fas and what does it do?
Definition
CD4 interacts and it induces cell death.
Term
a virus downregulates Class I MHC. Why? What happens?
Definition
downregulating class I MHC keeps it from expressing a piece of the virus to T cells. The NK cells are programmed to notice this, so they kill.
Term
what are the biggest viral killer cells? The second biggest?
Definition
1. cytotoxic (CD8) t cells
2. NK cells that notice that MHCI is downregulated
Term
what are the most common or typical response to a virus?
Definition
mast cells releasing cytotoxic histamine granules
Term
during heavy chain rearrangement, what is the B cell known as?
Definition
pro-B cell
Term
what is the first B cell developmental checkpoint?
Definition
expression of a pre-B cell receptor. Checks for heavy chain rearrangement. Pre-B cell receptor does NOT have to reach the surface of the cell
Term
how does a pre-B cell receptor signal?
Definition
Iga and Igb (analogous to CD3 and zeta chain of T cell)
Term
light chain rearrangement
Definition
happens in bone marrow to pre-B cell. There are 4 ways to arrange light chain.
Term
second B cell checkpoint in the bone marrow
Definition
expresses B cell receptor, which does have to make it to the cell surface. Checks for functional light chain.
Term
an immature B cell can have what two kinds of antibodies?
Definition
IgM, IgD
Term
name the five antibodies
Definition
IgG, IgA, IgM, IgE, IgD
Term
B cell negative selection
Definition
happens in the bone marrow. The B cell IgM will be grabbed repeatedly by self antigens, rearranging every time, until it isn't recognized. If it keeps being recognized, it will go into circulation but become anergic.
Term
B cell positive selection
Definition
happens in lymph node. B cells that have passed negative selection go to lymph node, are activated by a dendritic cell, and become mature B cells
Term
Describe B cell activation
Definition
1. antigen recognition (primary)
- signalling involving ITAM, Iga, Igb.
- this makes cells clump, after which they become activated.
---if clumping doesn't happen, you have coreceptor binding
2. after this you get the secondary signal (TI1, TI2, or T-dependant)
Term
B cell activation coreceptor
Definition
- binds B cells if clumping didn't happen after primary signal (antigen recognition)
- made up of CD19, CR2, CD81
Term
CD19, CR2,CD81
Definition
B cell activation coreceptor proteins

CD19: signalling molecule; used as a B cell marker

CR2: compliment receptor 2

CD81: nobody knows what this is
Term
TI-1, TI2, T-dependant secondary B cell activation
Definition
TI-1: the antigen-activated B cell binds to a toll-like receptor

TI-2: just very strong TI-1

T-dependant: antigen activated B cell gets second signal from helper T cell using CD40-CD40L ligand and cytokines
Term
secondary B cell activation signals, no matter which of the 3 kinds, result in...
Definition
IgM antibodies
Term
somatic hypermutation
Definition
B cells in the germinal center (centroblasts) have point mutations as they rapidly divide in the hypervariable/complementarity determining regions.

This happens because of AID, which point-mutates into uracil, which gets excised
Term
centroblasts
Definition
B cells that are rapidly dividing in the germinal center
Term
clonal selection
Definition
after finish dividing (now centrocytes) B cells have antigen presented by follicular dendritic cells. They compete for the binding/survival signals. At this time also bind helper T cells to determine survivability.
Term
during clonal selection, how does a B cell decide if it becomes a memory B cell or a plasma cell?
Definition
if helper T cell presents IL-10: plasma cell

IL-4: memory cell
Term
isotype switching
Definition
helper T cells that bound during clonal selection deliver signals via CD40-CD40L. This changes the constant region on the heavy chain to make IgG, IgA, IgE antibodies
Term
all antibodies can do two things:
Definition
1. neutralize - coat pathogens and toxins to keep them from interacting

2. activate complement (except for IgE)
Term
only which type of antibodies can activate Fc receptor-mediated endocytosis? What else do these two antibodies do?
Definition
IgA and IgG; can also activate immune cells to make them function better
Term
IgM
Definition
- forms pentamers
-Has low affinity binding, but it's big and so can bind multivalent antigens very well
- is GREAT at activating complement
- too big to get from blood into tissue; gets caught in bodily fluids
Term
IgA
Definition
- forms dimers
- very important for mucosal immunity, but not so great at complement activation and opsonization
- can undergo receptor-mediated endocytosis and cross into tissue
- present in breast milk
Term
IgG
Definition
- monomer
- can cross the placenta
- can cross into tissues
- induces ADCC (antibody dependant cell-mediated cytotoxicity) which is when antibodies tell NK cells to kill pathogen
Term
IgE
Definition
binds Fc receptors of mast cells and basophils, causing them to release granules (which induce the symptoms we call allergies)
Term
Ebola and interferons
Definition
Ebola blocks interferons (which are a type of cytokine) which then can't do their jobs of upregulating antiviral proteins - instead it stops them at the beginning and prevents the whole cascade. It also competitively binds the interferon receptors to get taken into the cell itself.
Term
Ebola and TNFa
Definition
Ebola causes TNFa to be secreted, which are antibacterial cytokines, which makes immune system go haywire and causes runaway bleeding
Term
RNA interference treatment
Definition
2nd treatment for Ebola; putting single stranded RNA in cells with Ebola so the body kills the cell
Term
how does herpes suplex infect so many cells so quickly?
Definition
It comes with its own ready-made proteins, instead of having to make them all
Term
herpes and viral post-shutoff
Definition
herpes virus randomly destroys all RNA in its vicinity. This includes its own, but since it has so much it's more likely to hurt the cell and keep the cell from making proteins.
Term
theory on why herpes goes dormant in the neurons
Definition
because it has to travel all the way down the axon to the nucleus and by the time it gets there it's lost all its replication proteins, so the DNA just circularizes and sits there.
Term
NGF (nerve growth factor)
Definition
when nerve cells aren't stressed, makes sure they grow and signals protiens to be produced. When it is stressed, will shut down the cell for a bit (no growth).
- this shutdown allows dormant herpes virus to receive a transcription factor.
Term
Type I allergies
Definition
basophils/eosinophils will recognize just a tiny bit of parasitic antigen and release cytokines. This will cause IgE to bind to mast cell Fc receptors. The mast cells release histamine-containing granules.
Term
Type II allergies
Definition
drugs like penicillin or other chemicals modify self cells until the body attacks them. (cytotoxic response to self-cells)
Term
Type III allergies
Definition
local injection causes immune complex formation, mast cells to release granules, and local inflammation
Term
Type IV allergies
Definition
DTH (delayed type hypersensitivity reaction)
- something that shouldn't be toxic accidentally gets processed by an antigen processing complex, triggering an immune response against it. T cell mediated.
Term
four things that can trigger autoimmunity
Definition
1. bad negative selection in thymus or bone marrow
2. injury causes lymphocytes to get exposed to things they don't recognize as self
3. Tregs don't work so immune activation threshhold is too low
4. pathogen expresses stuff that looks like self-proteins
Term
live attenuated vaccine
Definition
growing a live virus in something nonhuman until it can't attack a human but DOES trigger an immune response
Term
inactivated vaccine
Definition
treat virus with formelyn, which keeps it from getting into cells, but it WILL trigger immune response through immune receptors (like toll-like receptors)
Term
subunit vaccine
Definition
inject with just one specific protein. Include adjuvant to provide the danger signal.
Term
toxoid vaccine
Definition
like subunit, but specifically makes antibodies against the TOXIN of a pathogen. Needs boosters. Keeps it from killing us until can mount full immune response.
Term
conjugate vaccine
Definition
gets antibodies against sugars by linking the sugar with a protein and getting both taken up by B cell, which then makes antibodies against both.
Term
hyperacute rejection
Definition
pre-existing antibodies cause transplant to be rejected within minutes. It can be tested for before transplantation. The most dangerous is an ABO blood type mismatch.
Term
acute rejection
Definition
T cell mediated; happens in a few days. Happens because of mismatched MHC antigens. Induces endothelial cell damage, so highly vascularized tissues get the most acute rejection. Can be managed by immunosuppressants.
Term
chronic rejection
Definition
happens over years - smaller, low-level rejections that happen over time. Results in fibrosis (scarring.) Doesn't pay attention to immuno suppressants as much as acute does.
Term
HSC (hemapoeitic stem cell) transplantation
Definition
you kill all of the host's immune system first. Then, you take hemapoeitic stem cells from a donor to totally replace the host immune system.
- eliminates graft-vs-host disease, because there are no host immune cells to attack the donor organ
- but has no mature cells, so native cells might survive and kick out the new ones, so you wouldn't have negative selection against donor tissue
Term
WBM (whole bone marrow) transplantation
Definition
you still have adult cells in your transplant after irradiation. They can eliminate host cancer cells. Can attack remaining host immune cells and clear them out to replace immune system. Result in higher blood cell counts because don't have to wait for whole immune system to grow.
Term
which antibodies do complement fixation?
Definition
IgM, IgG, some IgA
Term
which antibodies do receptor mediated endocytosis?
Definition
IgG, IgA
Term
which antibodies do fetal and neonatal immunity?
Definition
IgG, IgA
Term
which antibodies trigger phagocytosis?
Definition
IgG, IgA
Term
which antibodies trigger ADCC?
Definition
IgG
Term
which antibodies activate mast cells?
Definition
IgE
Term
Fc receptor
Definition
found on surface of cells such as NK cells, follicular dendritic, and B cells. Binds antibodies that are bound to pathogen. Stimulate phagocytosis or cytotoxic cells to destroy microbes, or (to destroy infected cells), antibody-mediated phagocytosis or ADCC
Term
ADCC
Definition
antibody dependant cell-mediated cytoxocity

- antibodies bind an infected cell, NK cells bind the antibodies via Fc receptors, NK cell releases cytotoxic granules
Term
severe combined immunodeficiency
Definition
disease where you have no functional T cells. Also affects B cells because you have no T-dependant activation and therefore much less class switching
Term
delayed type hypersensitivity
Definition
same as type IV hypersensitivity. This is the only allergy that isn't antibody mediated, but rather is T cell mediated. This is when something makes it into MHC that isn't foreign but gets registered as foreign.
Term
activation-induced cell death
Definition
mediated by Fas and FasL. Kills T cells that have been out for too long.
Term
basophil
Definition
granuleocyte. Circulates (unlike mast cells.) Bind IgE.
Term
CD40 and B cells
Definition
link between T and B cells activates the B cells, triggering division, isotype switching, and turning into plasma cells to secrete antibody.
Term
class I MHC
Definition
found in almost every cell. Presents INTRACELLULAR pathogen fragments. Presents to cytotoxic (CD8) T cells. Uses TAP (transporter associated with antigen processing) to get protein from the cytosol to the lumen of the ER
Term
class II MHC
Definition
found ONLY on antigen presenting cells like dendritic cells and B cells. Grabs EXTRACELLULAR pathogens. Links with CD4 on helper T cells. Activated by the removal of CLIP.
Term
classical pathway
Definition
triggered by IgM or IgG binding to antigen via Fc receptors. Results in formation of C3b, which results in the formation of the membrane attack complex, which forms a hole in the target.
Term
complement control proteins
Definition
keep complement from attacking own body
Term
diapedesis
Definition
leukocytes escaping the blood into the tissue during inflammation
Term
eosinophils
Definition
granulocytes
Term
granzyme
Definition
found in NK cells and cytotoxic T cells. Induce programmed cell death. Packaged with perforin to get into the cells. They can also kill intracellular pathogens.
Term
IL-2
Definition
makes T cells into Tregs in the thymus, which kill self-attacking T cells. Also promote development into memory T cells.
Term
interferons
Definition
antiviral cytokines. Upregulate MHC I and II and increase immunoproteasome activity. Also activate immune cells like NK cells.
Term
megakaryocyte
Definition
giant cell that makes platelets
Term
PRRs
Definition
pattern recognition receptors. Recognize PAMPs and DAMPs. Toll like receptors are a kind of PRR.
Term
TdT
Definition
present in pre-B and pre-T cells. Adds N-nucleotides during VDJ recombination.
Term
TNFa
Definition
cytokine that induces inflammation.
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