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Final Exam 421
Structures and definitions
25
Biochemistry
Undergraduate 4
12/16/2013

Additional Biochemistry Flashcards

 


 

Cards

Term
What are the four attributes of living organisms?
Definition
(1) Growth
(2) Response to Stimulus
(3) Metabolism
(4) Replication
Term
 Describe the physical process of “oxidation".
Definition
Oxidation is the process whereby a molecule or ion loses electrons, raising its oxidation number.
Term
Write the equation defining pH.
Definition
pH = −log10[H+]
Term
 In the post-genomic era, what is the most common method to determine the sequence of a
protein?
Definition
Mass spectrometry sequencing of peptide fragments followed by a search against a genome database.
Term
   What does the acronym “DNA” represent?
Definition

 deoxyribonucleic acid

 

Term
Draw the structure of the A:T base pair.
Definition
[image]
Term
 Draw the structure of the G:C base pair.
Definition
[image]
Term
 Draw a lysine-glutamate salt bridge.
Definition
[image]
Term
 Draw the structure of urea.
Definition
[image]
Term
 Draw an arginine-aspartate salt bridge.
Definition
[image]
Term
 What does the acronym “SDS-PAGE” represent?
Definition
Sodium dodecyl sulfate polyacrylamide gel electrophoresis
Term
 What is the handedness of B-DNA?
Definition

 right-handed

 

Term
 Draw a schematic describing the fundamental process of information transfer in cells (the process described by Francis Crick in 1958 as the “central dogma of molecular biology”).
Definition
[image]
Term
 Draw the structure of guanidine hydrochloride (guanidine HCl).
Definition
[image]
Term
 What is the function of DNA Pol III?
Definition
DNA Pol III synthesizes new DNA at the replication fork (“elongation”).
Term
 What is the function of DNA Pol I?
Definition
DNA Pol I removes the RNA primers made by primase and fills with DNA.
Term
Draw the structure of the A:U base pair.
Definition
[image]
Term
What are the three most common amino acids in proteins, from most common to least
common?
Definition
leucine, alanine, serine
Term
 What are the three least common amino acids in proteins, from least common to most
common?
Definition
tryptophan, cysteine, histidine
Term
What is the visual shorthand for an α-helix?
Definition
Usually a flat, helical ribbon; sometimes a cylinder.
Term
 Describe the physical process of “reduction”.
Definition
Reduction is the process whereby a molecule or ion gains electrons, lowering its oxidation number.
Term
 Write the equation defining pOH.
Definition
pOH = −log10[OH-]
Term
 Write the equation defining pKw (include its value).
Definition
pKw=pH+pOH =14
Term
 What does the acronym “RNA” represent?
Definition
ribonucleic acid
Term
 What is the handedness of an  α-helix?
Definition
right-handed
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