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Exam 3 Biochem-Lecture 34
From Lecture Notes
30
Chemistry
Professional
11/06/2009

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Term
What are purines and pyrimidines?
Definition

 

Purines and pyrimidines, often called bases, are nitrogen-containing heterocyclic compounds.

Term
Purine bases you will find in DNA are
Definition
  • Adenine
  • Guanine
Term

 

Pyrimidines have a single .......sided ring structure.

Definition

 

Pyrimidines have a single six sided ring structure.

Term
   Example of Pyrimidines base
Definition

 

Uracil is found in RNA.

Term
 The purine NSs  end in 
Definition
"-sine"
Term
The pyrimidine NSs end in
Definition
"-dine"
Term
To name the NTs:
Definition
  • use the NS name
  •  followed by "mono-", "di-"
Term
NMP means
Definition

 

Nucleotide monophosphate

Term
NDP means
Definition

 

Nucleotide diphosphate

Term
NTP means
Definition

 

Nucleotide triphosphate

Term
Functions of Nucleotides
Definition

nEnergy metabolism
nMonomeric units of nucleic acids
nPhysiological mediators
nPrecursor function
nComponents of coenzymes
nActivated intermediates
nAllosteric effectors

 

Term
Nucleotides are  components of coenzymes:
Definition
  • Coenzyme A
  •  FAD
  • NAD+
  • NADP+
Term
Nucleotide activate intermediates like:
Definition
  • SAM (AdoMet)
  •  CDP-choline (phospholipids)
Term

Why is purine salvage pathway of metabolism of purine  important?

Definition

  • Because free purines are somewhat toxic.
The salvage pathway decreases the levels of PRPP, and therefore decreases the rate 
  • The salvage pathway decreases the levels of PRPP, and therefore decreases the rate 
of purine synthesis. This is an important regulatory mechanism for purine metabolism.

Term
Synthesis of purines requires
Definition

 

nAmino acids
¨Glycine
¨Glutamine (2)
¨Aspartate
nCO2   
nOne carbon units transferred via THF (2)
Term
GOUT is a disorder characterized by:
Definition
high levels of uric acid in blood, as a result of either the overproduction or under excretion of uric acid.
Term

 

nGout is treated with drug such as
Definition
allopurinol  that inhibit xanthineoxidase
Term
CPS I has:
Definition
  • Mitochondria
  • Urea Cycle
  • Ammonia
  • Activator:N-acetyl-glutamate
Term

 

              CPS II

Definition

 Cytosol

Pyrimidine Synthesis
g-amide group of glutamine
Activator:ATP
Inhibitor:UTP
Term
Source of carbon and nitrogen on pyrimidines are
Definition
  • 1,4,5,6 from ASparate
  • 2 from HCO3-
  • 3 from Glutamine amide
Term
Source of carbon and nitrogen atoms in purine ring
Definition

1 from Asparate amine

2 from C1-H4folate

3 from Glutamine amide

4, 5,7 from Glycine

8 from C1 H4folate

9 from Glutamine amide 

Term

 

In de novo synthesis, the pyrimidine ring is synthesized from

Definition
  • bicarbonate
  • aspartate
  • glutamine (or ammonium ion).
Term
Synthesis of pyrimidines vs. purines.
Definition

nFirst, the ring structure is assembled as a free base in pyrimidines, not built upon PRPP like purines.

nSecond, there is no branch in the pyrimidine synthesis pathway.
Term

 

In Synthesis of Pyrimidine Nucleotides, what is regulated step?

Definition

 Carbamoyl phosphate

   Synthetase II

Term

 

 

In Synthesis of Pyrimidine Nucleotides, committed step involves which enzyme?

Definition
Carbamoylaspartate
Term

The regulatory step in  Synthesis of Pyrimidine

Nucleotides involves which enzyme?

Definition
  • Carbamoyl phosphate
  • aspartate
Term
Regulation of Purine Synthesis
Definition

Inactivate Purine + PRPP----> Active Purine

Activate Purine + IMP/GMP/IMP---> Inactivate Purine

Term

Inactivate Purine + ????----> Active Purine

 

Definition
PRPP
Term
Activate Purine +????---> Inactivate Purine
Definition
 IMP/GMP/IMP
Term
Metabolism of Purine Nucleotides include:
Definition

 

nSynthesis of purine nucleotides
nPurine salvage
nPurine nucleotide interconversions
nGTP and tetrahydobiopterin
nUric acid
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