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Exam 2
Material from Exam 2
22
Biochemistry
Undergraduate 2
05/11/2012

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Term
Activation Energy (EA)
Definition
the minumum amount of energy required by molecule for a reaction to occur
"the hump"
Term
metastable state
Definition
thermodynamically unstable but kinetically stable
Term
Qualities of catalyst (4)
Definition
decrease Ea
do not change delta G
form transient complex with substrate
not altered or changed
Term
Enzyme reaction sequence
Definition
1. subrate binding specificity (active site)
2. induced fit model
3. substrate activation-bonds weakens
4. catalytic event
5. products released
Term
michaelis-menton (1913)
Definition
v=vmax[s]/km+[s]
Term
vmax definition
Definition
the max speed at infinite substrate concentration
Term
km definition
Definition
how well the enzyme binds to the substrate
if binding is good, km is low
Term
lineweaver-burk
Definition
1/v=(km/vmax)x(1/[s])+1/vmax
Term
y-intercept and x-intercept of L-B plot
Definition
y-int=1/vmax
x-int=-1/km
Term
irreversable enzyme inhibition
Definition
covalent bonds formed
(nerve gas inhibits Ache)
Term
rversable inhibitor
Definition
non-covalent bonds formed
Term
compettitive inhibition (4)
Definition
increases km
no change in vmax
binds to the same active site
at high [s], substrate will be favored
Term
non compettitive inhibition (4)
Definition
doesnt bind to active site
decreases vmax
no change in km
changes induced fit
Term
3 types of enzyme regulation
Definition
1. substrate level regulation (inhibition of enzyme)
2. allosteric activation/inhibition
3. covalent modification
Term
covalent modification examples
Definition
1. phosphorylation
2. cleavage
Term
allosteric activator/inhibitor
Definition
binds to the regulatory subunit
makes change to catalytic subunit
Term
how many ATP made in:
1.Glycolysis
2.TCA and OxPhos
Definition
1.2 ATP
2.34 ATP
Term
DOMS
Definition
delayed onset muscle sorness
Term
as ________ are flowing, _________ are pumped.
This reaction is (un)favorable?
Definition
electrons, protons
favorable
Term
Inputs to TCA cycle (3 amino acids)
Definition
Alanine-->pyruvate
Aspartate-->oxaloacetate
glutamate-->a-ketoglutamate
Term
movement of electrons in electron transport
Definition
NADH-->complex1-->CoQ-->complex3-->CytC-->complex4-->Oxygen

succinate-->complex2-->CoQ
Term
Who proposed the structure of F0F1 ATP synthase?
In what year? (same as dolly)
Definition
Boyer and Walker
1997
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