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Developmental Bio Exam 1
Developmental Biology
103
Biology
Undergraduate 4
09/11/2011

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Term
Epigenesis
Definition
organs and tissue formation
embryos occurs "de novo"
Aristotle
Term
Preformation
Definition
Organs and tissue grow from miniature forms the sperm or egg
Growth only
Term
Germ Plasm Theory
Definition
Separation of Germline and Soma
germline= heredity
Term
Weisman's Theory
Definition

-Heredity is effected by germ cells-distinct from soma/body

 

Term
Mosaic Development
Definition
determinants partitioned at each cell divion
only germ cells keep all determinants
Term
Regulative Development
Definition
Individual blastomeres could give rise to complete animal.
Term
Roux Experiment
Definition
supported mocaism
poked half of fertilized frog egg with hot needle
Term
Driesch Experiment
Definition
Regulative development in sea urchins
Tied string around larva and pinched one cell out
one cell developed normally the other died.
Term
Developmental Mechanics
Definition
identifying internal factors controlling development via direct experimental intervention
Term
3 main types of experiments
Definition
fate mapping, ablation/isolation, transplantation/ recombination
Term
Spemann's Organizer Experiment
Definition
transplanted organizer graft to dorsal axis
Term
5 basic processes of development
Definition
1. fertilization and cleavage(cell# increase)
2. pattern formation(axial pat. GL frmtn)
3. Morphogenesis/Gastrulation(3D shape)
4. Cell differentiation(strctrly,fxnly dif.)
5. Growth(cell div., incrsd emb. size, orgnognsis)
Term
Experiment proving differentiated cells have all the same genetic information
Definition
Xenopus albino embryos-->dif. cell nuclei inserted into enulcleated eggs of non-albino= genetic equiv.-->albino offspring
Term
Fate
Definition
what cells normally form in the embryo
(in chicago-->sox fan)
Term
determined
Definition
develop original fate in new position.
(in st. louis-->sox fan)
Term
Specified
Definition
develop normal fate in isolation
(in Iowa city-->sox fan)
Term
2 types of embryonic inductions and 2 things required for induction
Definition
permissive and instructive; competent to respond, and a threshold level of inducer must be present.
Term
Permissive induction
Definition
stimulation of a pre-existing potency, cells have only one response to inducer. (e.g. the action of hormones)
Term
Instructive Induction
Definition
Dose of inducer causes distinct changes in differentiation. (e.g. mesoderm induction)
Term
3 types of inducing signals
Definition
1. secreted growth factors
2. cell-cell contact
3. diffusion of small particles
Term
2 requirements for cell induction competence
Definition
1. cell needs appropriate receptors
2. intracellular signaling components must be present. (e.g. transcription factors)
Term
Positional Value
Definition
Related to cell's position along the line with respect to the boundaries on the ends. Interpretation depends on genetic information active and also influenced by development history
Term
Gradient
Definition
A mechanism for the detection of a cell's positional value. Gradient of chemical concentration across cells inducing a specific differentiation type
Term
Lateral inhibition
Definition
cells generate an inhibitor and release to immediate neighboring cells. allows for even spacing.
Term
asymmetric localization
Definition
caused by a specific cytoplasmic determinant becomes unequally divided. important for body axis patterning, neuronal diff, and stem cells
Term
progenitor
Definition
dont self renew, generate many types of progeny
Term
threshold
Definition
specific morphogen concentration necessary for cell to respond
Term
Correlation
Definition
two events occur together in development.
(beta catenin expressed in dorsal nuclei)
Term
causation
Definition
which causes which- coincidence or parallel event?
Starting point for investigations-- developing hypotheses.
Term
Loss of function
Definition
Demonstrates necessity. Stronger evidence than correlation, requires controls to show specificity
(loss of beta-catenin causes loss of dorsal axis)
Term
Gain of Function
Definition
Demonstrates sufficiency. Strongest evidence when coupled with loss of function.
(overexpression of beta-catenin protein causes second axis to form.)
Term
4 Characteristics of differentiated Cells
Definition
Terminal State, Protein differences, Structure, Post-mitotic
Term
2 variables important for control of transcription
Definition
1. specific transcription factors
2. chromatin architecture
Term
Enhancer
Definition
Sequence specific DNA elements
Term
Signal transduction pathway that controls transcription factor activity
Definition
Fibroblast Growth Factor Signaling Pathway- activity regulated by phosphorylation.
Term
4 Mechanisms of Chromatin Modification
Definition
1. heterochromatin- large scale silencing, x-inact.
2. Histone mod.
3. DNA methylation
4. Maintenance by transcription factors
Term
Facultative Heterochromatin
Definition
entire chromosome silenced; x-inactivation
Term
constitutive heterochromatin
Definition
large parts of chromosomes, centromeres, y chromosome.
Term
3 forms of post transcription modifications to histone tails
Definition
lysine acetylation-transcriptional activation
lysine methylation-tscriptional silencing
serine phosphorylation- mitotic/meiotic condensation
Term
totipotent
Definition
most potent of all cell types; only zygote and first cleavage blastomeres
Term
pluripotent
Definition
ability to differentiate into 3 different cell layers and all lineages
Term
Hematopoietic Stem Cells
Definition
Gives rise to all of the blood cell types; multipotent
Term
3 types of blood cells stem cells give rise to
Definition
Lymphoid, myeloid, and erythroid
Term
4 components formed from HSC
Definition
Fetal liver, thymus, spleen, bone marrow
Term
Experiment demonstrating the potency of HSC
Definition
In mice, irradiation stops blood cell production and eventually mice die. Inject HSC and mouse survives with many newly formed blood cells
Term
2 enzymes that define separate blood cell lineages and type of feedback involved
Definition
PU.1 and GATA; Negative feedback
Term
Nuclear transplantation experiment in xenopus
Definition
Take nucleus from either adult skin cell or tadpole epithelial gut cell→ take unfertilized frog egg and destroy DNA via UV radiation→transfer nucleus from ASC or TEGC to unfertilized egg=TADPOLE
Term
Cell type used for First Adult Cloned animal
Definition
Fully differentiated adult intestinal cell; South African clawed frog
Term
3 conclusions drawn from SCNT
Definition
1. Fully differentiated cells can be reprogrammed to be fully potent
2. There are no irreversible changes to the genome/genes during development
3. Inefficiency in reprogramming adult and late embryonic cells is likely due to epigenetic regulation
Term
3 early lineages of the blastocyst and their TFs
Definition
1. Epiblast(oct, nanog, sox2)
2. Trophectoderm(Cdx2, Eomes)
3. Primitive endoderm(Gata6, Sox7)
Term
Assay for developmental potential
Definition
ES cells carrying mutation of single gene in culture→ injected into ICM of normal blastocyst→ chimeric animal produces sperm carrying the mutation.
Term
Cdx2
Definition
-Transcription factor for spec. of TE
-inhibits oct4 gata6 and nanog in TE
-Stochastic expression
-B/t 8 & 16 cell stage:
(-) Inside Environment
Term
Oct4
Definition
Required for pluripot. Of ICM cells
Repressed by Cdx2 in TE
Mutants differentiate into TE cells
Uniform expression
Expressed in ICM
Term
Nanog
Definition
Overexpression of transcription factor induces reprogramming of cell to pluripotency
Epiblast specification
Grb2 represses nanog
Stochastic expression
Repressed in outer cells
Term
GATA-6
Definition
S.E.
PE spec.
Grb2 induces GATA6
Blastocoelic surface
Term
3 TF required for pluripotency (until implantation)
Definition
Oct4, Nanog, Sox2 (in epiblast and ES cells)
Bind their own promoters and each others.
Term
Totipotent
Definition
in mammals only the zygote and the first cleavage blastomeres
Term
Pluripotent
Definition
all three germ layers; ESC
Term
Multipotent
Definition
Adult stem cells; partially reprogrammed cells; HSCs
Term
Unipotent
Definition
form only one cell type; spermatogonial stem cells
Term
3 sources of stem cells
Definition
adult stem cells, human embryonal stem cells, reprogrammed cells
Term
Embryonal Carcinoma cells
Definition
Embryonal tumor inducing cancer cells that exibit differentiation in a way similar to normal development.
Term
Grb2
Definition
Transcription factor for PE
activates gata6
inhibits Nanog in sub pop of ICM
Ras-Map pathway
Term
cell fate--> cell position
Definition
epiblast
Term
cell position--> cell fate
Definition
ICM and TE
Term
Evans Reasoning
Definition
since EC cells differentiate in way that followed normal development (properly organized tissues) there might be a normal population of pluripotent cells in the early embryo.
Term
5 Assays for accessing the developmental potential of cells
Definition
in vitro differentiation, teratoma formation, chimera formation, germline contribution, tetraploid complementation
Term
Teratoma formation
Definition
Induction of tumors demonstrating the potential to generate differentiated cell types of various lineages.
Term
Chimera Formation
Definition
Contribution of cells to normal development following injection into host blastocyst.
Term
Tetraploid complementation
Definition
injection of test cells into 4n blastocyst
4n host cells cannot contribute to somatic lineages embryo is exclusively composed of test cells
Term
mES cells
Definition
according to 5 tests, most potent
Term
3 Problems with using generic human ES cells
Definition
1. human ES dont not have exactly the same pluripotency properties as mouse ES cells
2. Ethics (132 lines)
3. Teratomas and Tissue rejection
Term
3 Reprogramming Strategies
Definition
1. SCNT
2. Nuclear transfer to amphibian oocyte
3. cell fusion
Term
MSP
Definition
Sperm specific protein used by nematode for sperm mobility in place of actin- allows for crawling via lamellapodia
Term
AMH
Definition
Hormone secreted by Sertoli Cells in Fetal Development. Inhibits Mullerian duct development
Term
Activin and Inhibin
Definition
Regulate FSH synthesis by ant. pit.
Term
Dynein
Definition
Motor protein on MT; if mutated: diabetes, infertilitly, respiratory tract problems
Term
Igf2
Definition
Insulin like growth factor
-cis acting
-regulation is reciprocal
-active in males
-involved in placental growth and ultimate size of embryo
Term
UBE3A
Definition
ubiquitin ligase
-controls protein stability
-If lost in genome of mom=Angelman syndrome
dad=prader willi syndrome
-chrom 15
Term
Bindin
Definition
-Protein released/ expressed after microvillar acrosomal process
-Mediates species specific recognition
-in sperm
Term
CG Protease
Definition
-Digests proteins connecting vitelline membrane to PM
-Also digests bindin receptors and attached sperm
Term
Mucopolysaccharides
Definition
causes influx of water b/t vitelline envelope- causes to swell and expand
Term
Peroxidase Enzymes
Definition
Hardens the F.E.
tyrosine cross linking
Term
Hyaline
Definition
extracellular matrix support for blastomeres
Term
SED 1
Definition
Protein used in human sperm instead of Binding when binding to egg intitially
Term
ZP3
Definition
Protein on Zona Pellucida that acts as a species specific receptor. (because mammals dont have jelly coat)
Term
GalT
Definition
Galactosyl Transferase
-Recognizes sugars on ZP3 to initiate the acrosome reaction (present in sperm)
Term
CD-9
Definition
Egg protein CD-9 binds sperm and initiates sperm-egg fusion
Term
cdc2 and cyclin B
Definition
MPF controls cell cycle degraded by Ca2+ which regulates exit from metaphase
Term
Oskar
Definition
-Assembly and organization of pole plasm
-ectopic
-mRNA localized at posterior pole (by stauffer protein)
Term
pie-1
Definition
involved in maintaining stem cell properties of P blastomere in nematodes and drosophila
-represses transcription
Term
Blimp-1
Definition
-repression of transcription in mammalian cells
-inhibits HoxB1 in somatic cells
Term
Fragilis
Definition
Transmembrane protein that demarcates GC's from neighboring somatic cells
Term
Stella
Definition
Exclusive to germ cell lineage
Term
Hox
Definition
repressed in Primitive Germ Cells
-ret. totipotent
Term
Vasa
Definition
RNA helicase present in pole cells used to trace
Term
Nanos & Pumilio
Definition
Required for transcriptional silencing but not for cell-pole budding
Term
RNA pol II
Definition
-Activated by phosphorylation of CTD
-Initiates transcription
Term
Wunen
Definition
idk
Term
HMGCoA Reductase
Definition
-columbus
-migration to mesoderm in drosophila
-used in prospective gonad
-attracts
Term
SDF-1
Definition
-Main guidance cue in both zebra fish and mic
-Long range attraction for PGC
-Ligand
Term
CXCR4
Definition
Receptor for SDF-1 chemoattractant
Term
CYP26B1
Definition
-Retinoic Acid (vit A)
-Regulates meiotic entry in males and females.
-prevents meiosis
-kept on in males
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