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Citric Acid Cycle & Oxidative Phosphorylation
Exam 2
25
Biochemistry
Undergraduate 3
02/29/2016

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Term
Where do most steps of cellular respiration occur?
Definition
in mitochondria
Term
What distinguishes the outer membrane of the mitochondria from the inner membrane?
Definition
outer = like plasma membrane; freely permeable to small molecules

inner = very evaginated for larger surface area; most things require transporters to cross it
Term
What is the main input for the CAC?
Definition
acetyl CoA from glycolysis or fatty acid breakdown
Term
Is the isomerization of citrate to isocitrate by aconitase reversible or irreversible?
Definition
reversible
Term
What kind of reaction happens when NAD+ dependent isocitrate dehydrogenase converts isocitrate --> alpha ketoglutarate?
Definition
the first oxidative decarboxylation
Term
What kind of reaction takes place when alpha ketoglutarate dehydrogenase converts alpha ketoglutarate --> succinyl CoA?
Definition
the second oxidative decarboxylation
Term
What energy coupling takes place when succinyl CoA synthetase converts succinyl CoA --> succinate?
Definition
release of energy from cleavage of thioester bond is coupled to phosphorylation of GDP
Term
What is the only citric acid cycle step not in the matrix?
Definition
succinate dehydrogenase converting succinate --> fumarate
Term
What takes place when fumarase converts fumarate --> L malate?
Definition
a stereospecific H2O addition
Term
How does pyruvate dehydrogenase control metabolism?
Definition
it is the irreversible conversion of pyruvate --> acetyl CoA
Term
2 primary control points for the control of citric acid cycle metabolism
Definition
1. alpha ketoglutarate dehydrogenase
2. citrate synthase
Term
Why must the CAC intermediates be replenished?
Definition
they are siphoned off as precursors for anabolic reactions
Term
hydride ion (H-)
Definition
hydrogen with an extra electron (2 valence electrons)
Term
How is succinate dehydrogenase different from other dehydrogenase complexes in the CAC?
Definition
succinate dehydrogenase = transfers electrons to FAD (which can't just accept 2 electrons so it --> FADH2)

other dehydrogenase complexes = transfer hydride ions to NAD
Term
electron transport
Definition
electrons are used to reduce a series of oxidized proteins with progressively higher affinities for electrons (positive E knot prime)
Term
4 complexes in the electron transport chain
Definition
1. complex I
2. complex II
3. complex III
4. complex IV
Term
reduction potential (E knot prime)
Definition
measure of how readily an oxidized molecule will accept electrons compared to the standard proton
Term
formula for change in reduction potential
Definition
reduction "reduction potential" - oxidation "reduction potential"
Term
equation relating reduction potential & free energy
Definition
standard free energy = -n(F)(reduction potential)
Term
How many multi-protein complexes are in the mitochondrial respiratory chain?
Definition
4
Term
reaction for ETC complex I (NADH:Q oxidoreductase)
Definition
NADH + Q + 5 H+ matrix --> NAD+ + QH2 + 4H+ IMS
Term
reaction for ETC complex II (succinate dehydrogenase)
Definition
FADH2 + Q --> FAD + QH2
Term
reaction for ETC complex III (Q-cytochrome c oxidoreductase)
Definition
QH2 + 2 cyt c ox + 2 H+ matrix --> Q + 2 cyt c red + 4 H+ IMS
Term
reaction for ETC complex IV (cytochrome c oxidase)
Definition
4 cyt c red + 8 H+ matrix + O2 --> 4 cyt c ox + 2 H2O + 4 H+ IMS
Term
What is the name for the key reaction in the electron transport chain?
Definition
Q cycle
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