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Chapters 7 8 9
Chapters 7 8 9
49
Biology
Undergraduate 1
10/10/2010

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Term
Cellular respiration
Definition
a process by which living cells obtain energy from organic molecules and release waste products
Term
Aerobic respiration
Definition
a type of cellular respiration in which O2 is consumed and CO2 is released
Term
Metabolic pathways
Definition
series of chemical reactions in which each step is catalyzed by a chemical reaction; glycolysis, breakdown of pyruvate, citric acid cycle, and oxidative phosphorylation
Term
Three energy intermediates
Definition
ATP, NADH, and FADH2
Term
Substrate-level phosphorylation
Definition
a method of synthesizing ATP that occurs when an enzyme directly transfers a phosphate from an organic molecule to make ADP
Term
Citric acid cycle (Krebs cycle)
Definition
cycle that results in breakdown of carbohydrates to carbon dioxide
Term
Metabolic cycle
Definition
biochemical cycle in which particular molecules enter while others leave; process is cyclical because it involves a series of organic molecules that are regenerated with each turn of cycle
Term
Oxidative phosphorylation
Definition
process during which NADH and FADH2 are oxidized to make more ATP via phosphorylation of ADP
Term
Electron transport chain (ETC)
Definition
Group of protein complexes and small organic molecules within inner membranes of mitochondria and chloroplasts and plasma membrane of prokaryotes; components accept and donate electrons to each other in linear manner of redox reactions; produce H+ electrochemical gradient with positive charge outside matrix
Term
ATP synthase
Definition
enzyme that utilizes energy stored in H+ electrochemical gradient for synthesis of ATP via chemiosmosis
Term
Anaerobic respiration
Definition
breakdown of organic molecules in the absence of oxygen
Term
Fermentation
Definition
breakdown of organic molecules to produce energy without any net oxidation of an organic molecule
Term
Primary metabolism
Definition
synthesis and breakdown of molecules and macromolecules found in all forms of life and essential for cell structure and function
Term
Secondary metabolism
Definition
synthesis of chemicals not essential for cell structure and growth and usually not required for cell survival but are advantageous to the organism (called secondary metabolites)
Term
Secondary metabolites
Definition
phenolics, alkaloids, terpenoids, and polyketides
Term
Phenolics
Definition
antioxidants with intense flavors and smells
Term
Alkaloids
Definition
bitter tasting molecules for defense
Term
Terpenoids
Definition
intense smells and colors
Term
Polyketides
Definition
chemical weapons
Term
Photosynthesis
Definition
process whereby light energy is captured by plant, algal, or bacterial cells and used to synthesize organic molecules from CO2 and H2O (or H2S)
Term
Heterotroph
Definition
organism that cannot produce own organic molecules and must obtain organic food from other organisms
Term
Autotroph
Definition
organism that has metabolic pathways that use energy from either inorganic molecules or light to make organic molecules
Term
Photoautotroph
Definition
organism that uses energy from light to make organic molecules from inorganic sources
Term
Chloroplast
Definition
semiautonomous organelle found in plant and algal cells that carry out photosynthesis
Term
Chlorophyll
Definition
a photosynthetic green pigment found in chloroplasts of plants algae, and some bacteria
Term
Mesophyll
Definition
internal tissue of plant leaf; site of photosynthesis
Term
Stomata
Definition
surface pores on plant surfaces that can be closed to retain water or open to allow entry of CO2 needed for photosynthesis and the exit of oxygen and water vapor
Term
Thylakoid membrane
Definition
membrane within chloroplast that forms many flattened, fluid filled tubules (thylakoids) that enclose a single, convoluted compartment (thylakoid lumen); contains chlorophyll, site where light-dependent reactions of photosynthesis occurs; stack on top of each other to form granum (plural, grana)
Term
Stroma
Definition
fluid filled region of chloroplast between thylakoid membrane and inner membrane
Term
Two stages of photosynthesis
Definition
light reactions and Calvin cycle
Term
Light reactions
Definition
photosystems II and I absorb light energy and produce ATP, NADPH, and O2
Term
Calvin cycle
Definition
ATP used as source of energy, NADPH used as source of high-energy electrons so CO2 can be incorporated into carbohydrate
Term
Wavelength
Definition
distance from peak of one light wave to the next
Term
Photons
Definition
discrete particles that make up light; massless and travel in wavelike patterns
Term
Pigment
Definition
molecule that can absorb light energy
Term
Carotenoids
Definition
type of photosynthetic or protective pigment found in plastids that imparts a color that ranges from yellow to orange to red
Term
Absorption spectrum
Definition
diagram that depicts wavelengths of electromagnetic radiation that are absorbed by a pigment
Term
Action spectrum
Definition
rate of photosynthesis plotted as a function of different wavelengths of light
Term
Photosystems pathway
Definition
P680 → Pp → QA → QB → Cytochrome complex → Pc → PSI → P700 → Fd → NADP+ reductase
Term
Cyclic phosporylation (cyclic electron flow)
Definition
pattern of electron flow in thylakoid membrane that is cyclic and generates ATP alone
Term
Light harvesting complex (antenna complex)
Definition
component of PSI and PSII composed of several dozen pigment molecules that are anchored to proteins in thylakoid membranes of chloroplast; role is to absorb photons of light
Term
Manganese cluster
Definition
site where oxidation of water occurs in photosystem II during photosynthesis
Term
Enhancement effect
Definition
phenomenon in which maximal activation of pigments in PSI and PSII is achieved when organisms are exposed to two wavelengths of light (680 nm and 700 nm simultaneously)
Term
Z scheme
Definition
model depicting series of energy changes of an electron during light reactions of photosynthesis; electron absorbs light energy twice, resulting in energy curve with zigzag shape
Term
Three stages of Calvin cycle
Definition
carbon fixation, reduction and carbohydrate production, and regeneration of RuBP
Term
Rubisco
Definition
enzyme that catalyzes first step in Calvin cycle
Term
Photorespiration
Definition
metabolic process occurring in C3 plants that occurs when enzyme rubisco combines with oxygen instead of carbon dioxide and produced only one molecule of 3PG instead of two, thereby reducing photosynthetic efficiency
Term
C3 plants
Definition
incorporate CO2 into organic molecules via RuBP to make 3PG, a three-carbon molecule
Term
C4 plants
Definition
use PEP carboxylase to initially fix CO2 into simple sugars; adaptation to hot, dry environments
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