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Chapter 9
SCC Bio229 - Ch 9
102
Microbiology
Undergraduate 1
03/23/2014

Additional Microbiology Flashcards

 


 

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Term
sterilization
Definition
refers to the removal of the destruction of all microbes, including viruses and bacterial endospores
Term
prions
Definition
infectious proteins
very resistant, not killed during standard sterilization procedures
Term
aseptic
Definition
describes an environment or procedure that is free of contamination by pathogens
Term
disinfection
Definition
refers to the use of chemical or physical agents known as disinfectants to inhibit or destroy microorganisms, especially pathogens
-term only used for inanimate objects
Term
disinfectants
Definition
physical or chemical agents used to inhibit or destroy microorganisms especially pathogens
-ie: UV light, heat, alcohol, bleach
Term
antisepsis
Definition
less concentrated disinfectants to be used on skin or tissue
Term
antiseptic
Definition
less concentrated disinfectant chemical used on the skin or tissue
Term
degerming
Definition
removal of microbes from a surface by scrubbing
Term
sanitization
Definition
process of disinfecting places and utensils used by the public to reduce the number of pathogenic microbes to meet accepted public health standards
Term
pasteurization
Definition
the use of heat to kill pathogens and reduce the number of spoilage microorganisms in food and beverages
Term
-stasis/static
Definition
suffixes which indicate that a physical or chemical agent inhibits microbial growth, but does not necessarily kill microbes
Term
-cide/cidal
Definition
suffixes that refer to agents that destroy or permanently inactivate a particular type of microbe
-ie: virucides, bactericides, fungicides
Term
microbial death
Definition
permanent loss of reproductive activity under ideal environmental conditions
Term
microbial death rate
Definition
technique in evaluating the efficacy of an antimicrobial agent
Term
most resistant microbes
Definition
-bacterial endospores
-species of Mycobacterium
-cysts of protozoa
**prions are more resistant than any living thing
Term
high level germicides
Definition
kill all pathogens, including bacterial endospores
Term
intermediate level germicides
Definition
-kill fungal spores, protozoan cysts, viruses, and pathogenic bacteria
-does not kill bacterial endospores
Term
low level germicides
Definition
eliminate vegetative bacteria, fungi, protozoa, and some viruses
Term
phenol coefficient
Definition
calculating a ratio that compares a given agent's ability to control microbes to that of phenol under standardized conditions
-the larger the ratio, the greater the effectiveness
Term
use-dilution test
Definition
-researcher dips several metal cylinders into broth cultures of bacteria, and briefly dries them at 37*C
-each contaminated cylinder immersed into different dilutions of the disinfectants being evaluated
-most effective= the one that entirely prevents microbial growth at the highest dilution
Term
Kelsey-Sykes capacity test
Definition
-researchers add a suspension of bacterium to a suitable concentration of the chemicals being tested
-at predetermined times, they move samples of the mixture into growth medium containing a disinfectant deactivator
-lack of turbidity reveals the minimum time required for the disinfectant to be effective
Term
in-use test
Definition
-more realistic method
-swabs are taken from actual objects (ie, operating room equipment) both before and after the application of a disinfectant or an antiseptic
Term
thermal death point
Definition
the lowest temperature that kills all cells in a broth in 10 minutes
Term
thermal death time
Definition
the time it takes to completely sterilize a particular volume of liquid at a set temperature
Term
decimal reduction time
Definition
the time required to destroy 90% of the microbes in a sample
Term
moist heat
Definition
-commonly used to disinfectant, sanitize, sterilize, and pasteurize
-kills cells by denaturing proteins and destroying cytoplasmic membranes
-works better than dry heat because water is a better conductor of heat than air
-includes: boiling, autoclaving, pasteurizing, and ultrahigh temperature sterilization
Term
boiling
Definition
-moist heat
-kills the vegetative cells of bacteria and fungi, the trophozoites of protozoa, and most viruses within 10 minutes at sea level
-note: it is impossible to boil something more quickly just by adding more heat; the added heat is carried away by the escaping steam
Term
autoclaving
Definition
-sterilizing by means of higher temperatures than boiling water
-pressure is added to the boiling water in order to prevent the escape of steam and ultimately achieve the required temperature
Term
autoclaving
Definition
-sterilizing by means of higher temperatures than boiling water
-pressure is added to the boiling water in order to prevent the escape of steam and ultimately achieve the required temperature
Term
autoclave
Definition
-device that uses steam heat under pressure to sterilize chemicals and objects that can tolerate moist heat
-standard settings for sterilization: 121*C, 15 psi, 10 minutes
-sterilization requirements: steam must be able to contact all liquids and surfaces that might be contaminated with microbes
Term
pasteurization
Definition
-a method of heating food and/or beverages just enough to kill the microorganisms that cause spoilage without ruining the taste
-not a form of sterilization, thermophilic and thermodurmic prokaryotes survive
-batch method= 63*C for 30 min
-flash pasteurization= 72*C for 15 sec
-ultra-high temperature= 134*C for 1 sec
Term
ultra-high temperature sterilization
Definition
-flash heating milk or other liquids in order to rid them of all living microbes
-liquid is passed through superheated steam at 140*C for 1-3 sec and then cooling it rapidly
Term
dry heat
Definition
-sterilization with dry heat requires higher temperatures for longer times than moist heat b/c dry heat penetrates more slowly
-typically: 171*C for 1 hr or 160*C for 2 hrs
Term
ultimate means of sterilization
Definition
incineration.
Term
refrigeration
Definition
-decreases microbial metabolism, growth, and reproduction because chemical reactions occur more slowly at low temperatures
-halts the growth of most pathogens, which are predominantly mesophiles
->exceptions: Listeria and Yersinia
Term
slow freezing
Definition
-ice crystals have time to form and puncture cell membranes
-more effective than quick freezing in inhibiting microbial growth
Term
freezing for storage
Definition
-liquid water unavailable at subzero temperatures
-many bacteria and viruses are stored in low temperature freezers at -30*C to -80*C
-able to reconstitute the microbes into viable populations by warming them in media containing proper nutrients
Term
dessication
Definition
-aka drying
-inhibits microbial growth because metabolism requires liquid water
Term
lyophilization
Definition
technique combining freezing and drying, to preserve microbes and other cells for many years
Term
filtration
Definition
the passage of fluid (either liquid or gas)through a sieve designed to trap particles-ie, cells or viruses-and separate them from fluid
Term
membrane filters
Definition
-thin (0.1 mm) circles of nitrocellulose or plastic containing specific pore sizes, some small enough to trap viruses
-pore size: 0.22 micrometers typically used in labs, sometimes 0.45 micrometers
-smallest pore size 0.01 for smallest viruses
-healthcare and labs usually use filtration to prevent airborne contamination of microbes
Term
HEPA filters
Definition
->high-efficiency particulate air filters
-crucial parts of biological safety cabinets
-also mounted into the air ducts of some operating rooms, rooms occupied by airborne diseases, and rooms of immunocompromised patients
Term
osmotic pressure
Definition
-the pressure exerted across a selectively permeable membrane by the solutes in a solution on one side of the membrane
-the osmotic pressure exerted by high-salt or high-sugar solutions can be used to inhibit microbial growth in certain foods
-cells in a hypertonic solution lose water and the cell dessicates
-fungi are resistant
Term
particulate radiation
Definition
the release of high-speed subatomic particles, such as protons
Term
electromagnetic radiation
Definition
-waves of electromagnetic energy from atoms
-energy without mass traveling in waves at the speed of light
Term
wavelength
Definition
-the distance between two crests of a wave
-ranges from very short gamma rays, through X rays, ultraviolet light, and visible light, to long infrared rays, and to very long radio waves
-the shorter the wavelength of an electromagnetic wave, the more energy it carries, and thus is more damaging to cells
Term
ionizing radiation
Definition
-wavelengths shorter than 1 nm
-sufficient energy to eject electrons from atoms, creating ions
-includes electron beams, gamma rays, X rays
Term
electron beams
Definition
-produced by cathode ray machines
-highly energetic and therefore very effective in killing microbes in just a few seconds
-cannot sterilize thick objects or objects covered with large amounts of organic matter
Term
gamma rays
Definition
-emitted by some radioactive elements such as radioactive cobalt
-penetrate much farther than electron beams but require hours to kill microbes
Term
gamma irradiation
Definition
-FDA approved gamma irradiation for microbial control in meats, spices, fresh fruits and vegetables
-kills not only microbes, but also larvae and eggs of insects. also kills the cells of fruits and vegetables preventing spoilage or over-ripening
*many fast foods are irradiated
Term
nonionizing radiation
Definition
-electromagnetic radiation with a wavelength greater than 1 nm does not have enough energy to force electrons out of orbit
-only UV light has sufficient enough energy to be an antimicrobial agent
Term
ultraviolet light
Definition
-nonionizing radiation/antimicrobial agent
-UV light with 260 nm is specifically absorbed by adjacent pyrimidine nucleotide bases in DNA, causing them to form covalent bonds with each other rather than hydrogen bonds with bases in the complementary DNA strand (=pyrimidine dimers)
-UV light does not penetrate well
Term
pyrimidine dimers
Definition
-covalent bonds formed between adjacent pyrimidine nucleotide bases in DNA, rather than hydrogen bonds with bases of the complimentary DNA strand
-occurs with adjacent C, T, or U
-most commonly thymine
-distorts the shape of DNA, making it nearly impossible for a cell to transcribe or replicate its genetic material
Term
biosafety levels
Definition
CDC established guidelines for four levels of safety in microbiological laboratories dealing with pathogens
Term
BSL-1
Definition
Biosafety Level 1:
-suitable for handling microbes not known to cause disease in healthy humans, ie: E. coli
-precautions are minimal and include hand washing with antimicrobial soap and washing surfaces with disinfectants
Term
BSL-2
Definition
Biosafety Level 2:
-similar to BSL-1 but designed for handling moderately hazardous agents
-ie: hepatitis, influenza, MRSA
-access to lab is limited when work is being conducted, extreme precautions with contaminated sharp objects, procedures with possible aerosols conducted in safety cabinets
Term
BSL-3
Definition
Biosafety Level 3:
-stricter. requiring that all manipulations be done with HEPA safety cabinets and specifying special design features for the lab
-double set of doors with ventilation, air leaving room through HEPA-filters
-ie: tuberculosis, anthrax bacteria, viruses of yellow fever and Rocky Mountain spotted fever
Term
BSL-4
Definition
Biosafety Level 4:
-most secure laboratories
-designated for dangerous or exotic microbes that cause severe or fatal diseases in humans
-ie: Ebola, smallpox, and Lassa fever viruses
-these labs are either isolated building or completely separated from all other areas of their buildings
-entry and exit are strictly controlled through electronically sealed airlocks with multiple showers, vacuum room, UV light room, and other safety precautions
-all air and water entering or leaving facility is filtered
-personnel wears "space suits" supplied with air hoses
Term
chemical methods of microbial control
Definition
-more commonly used than physical methods
-chemical agents tend to destroy or inhibit the growth of enveloped viruses, vegetative cells of bacteria, fungi and protozoa more than fungal spores, protozoan cysts, or bacterial endospores
-includes: phenols, alcohols, halogens, oxidizing agents, surfactants, heavy metals, aldehydes, gaseous agents, and enzymes
Term
phenolics
Definition
-in 1867, Dr. Joseph Lister began using phenols to reduce infection during surgery
-compounds that have been derived from phenol molecules that have been chemically modified by the addition of halogens or other organic functional groups
-intermediate to low level disinfectants
-denature proteins and disrupt cell membranes in large variety of pathogens
-commonly used in healthcare settings, laboratories, and households
-disagreeable odor and possible side effects
Term
bisphenolics
Definition
-composed of two covalently linked phenolics
-examples: orthophenylphenol = active ingredient in Lysol; triclosan = incorporated into numerous consumer products such as garbage bags, diapers, cutting boards
Term
hexachlorophene
Definition
once a popular household bisphenolic, found to cause brain damage in infants
Term
alcohols
Definition
-bactericidal, fungicidal, and virucidal against enveloped viruses
-not effective against fungal spores or bacterial endospores
-considered intermediate level disinfectants
-denature proteins and disrupt cytoplasmic membranes (note that denaturation of protein requires water)
-solutions of 70%-90% alcohol are typically used to kill microbes
-commonly used: rubbing alcohol (isopropanol) and drinking alcohol (ethanol)
Term
isopropanol
Definition
-rubbing alcohol
-slightly superior to ethanol as a disinfectant and antiseptic
Term
tinctures
Definition
solutions of other antimicrobial chemicals in alcohol and are more effective than the same chemicals dissolved in water
Term
halogens
Definition
-the four very reactive, nonmetallic chemical elements: iodine, chlorine, bromine, and fluorine
-intermediate level antimicrobial chemicals
-effective against vegetative bacterial and fungal cells, fungal spores, some bacterial endospores, and many viruses
-unfold and denature essential proteins including enzymes
Term
iodine
Definition
-well known antiseptic
-protozoan cysts survive water tx
-used as either a tincture or iodophor (ie: Betadine)
Term
iodophor
Definition
-an iodine-containing organic compound that slowly releases iodine
-long lasting and non-irritating to the skin
-ie, Betadine: used for surgery prep, prior to injections, and for burns
Term
chlorine
Definition
-elemental form of chlorine: used for to treat drinking water, swimming pools, and waste water
-compounds containing chlorine: sodium hypochlorite (household chlorine bleach), and calcium hypochlorite.. used for disinfection of utensils or dialysis systems
Term
emergency drinking water
Definition
-2 drops of household bleach added to a liter of water for an emergency
-does not kill protozoan cysts, bacterial endospores, or viruses
Term
chlorine dioxide
Definition
-a gas that can be used to disinfect large spaces
-used in the federal buildings contaminated with anthrax spores following the 2001 bioterrorism attack
Term
chloramines
Definition
-chemical combinations of chlorine and ammonia
-used in wound dressings, as skin antiseptics, and in some municipal water supplies
-less effective antimicrobial agents than other forms of chlorine, but they release chlorine slowly and thus are longer lasting
Term
bromine
Definition
-an effective disinfectant in hot tubs because it evaporates more slowly than chlorine at high temperatures
-used as an alternative to chlorine in swimming pools, cooling towers, and other water containers
Term
fluorine
Definition
-the form of fluoride is antibacterial in drinking water and toothpastes
-can help reduce the incidence of dental caries
-disrupts the metabolism in the biofilm of dental plaque
Term
oxidizing agents
Definition
-kill microbes by oxidizing their enzymes, thereby preventing metabolism
-high level disinfectants and antiseptics that work by releasing oxygen radicals (especially effective for anaerobic microorganisms)
-ie: peroxide, ozone, and peracetic acid
-used in deep puncture wounds
Term
hydrogen peroxide
Definition
-common household chemical that can disinfect and even sterilize the surfaces of inanimate objects
-not a good antiseptic for open wounds because catalase neutralizes the hydrogen peroxide into oxygen and water
-hot hydrogen peroxide used by food processors to sterilize packages like juice boxes
Term
ozone
Definition
-reactive form of oxygen generated when molecular oxygen 02 is subjected to electrical discharge
-ozone is what gives the fresh air smell after thunderstorms
-Canadian and European municipalities treat their water with ozone instead of chlorine. better antimicrobial agent, but more expensive.
Term
peracetic acid
Definition
-extremely effective sporicide that can be used to sterilize surfaces
-used by food processors and medical personnel
-it is not adversely effected by organic contaminants and does not leave behind any toxic residue
Term
surfactants
Definition
-"surface active" chemicals
-reduces the surface tension of solvents such as water by decreasing the attraction among molecules
-reduction of surface tension results in the solvent becoming more effective at dissolving solute molecules
-low level disinfectants
-include: soaps, detergents, and quats
Term
soap
Definition
-by themselves are good degerming surfactant, but poor antimicrobial agents
-when household soaps are antiseptic, it is because they contain antimicrobial chemicals
Term
synthetic detergents
Definition
-positively charged organic surfactants that are more soluble in water than soaps
-most popular detergents for microbial control= quaternary ammonia compounds (aka quats)
Term
quats
Definition
-quaternary ammonia compounds
-composed of an ammonium cation, in which the hydrogen atoms are replaced by other functional groups or hydrocarbon chains
-colorless, tasteless, and harmless to humans
-ideal for many medical and industrial applications
-ie: benzalkonium chloride (Zephiran) and cetylpyridinium chloride (Cepacol mouthwash)
-function by disrupting cellular membranes, so that cells lose essential ions such as potassium ions
-bactericidal (Gm+), fungicidal, virucidal (enveloped viruses)
-some pathogens thrive in quats= low level disinfectant
Term
heavy metals
Definition
-heavy metal ions combine with sulfur atoms in molecules of cysteine, an amino acid. such bonding denatures proteins, inhibiting or eliminating their function
-low level bacteriostatic and fungistatic agents
-includes: arsenic, zinc, mercury, silver, and copper
-ie: 1% silver nitrate, thimerosal, copper
Term
1% silver nitrate
Definition
-previously used in the eyes of newborns to prevent blindness caused by N. gonorrhoeae
-silver still plays an antimicrobial role in surgical dressings, burn creams, and catheters
Term
thimerosal
Definition
-example of a heavy metal
-mercury containing compound to preserve vaccines
Term
copper
Definition
-interferes with chlorophyll
-used to control algal growth in reservoirs, fish tanks, swimming pools, and water storage tanks
-effective algicide in concentrations as low as 1 ppm
-blue solution added to ponds
Term
aldehydes
Definition
-compounds containing terminal -CHO groups
-function in microbial control by cross-linking (forming covalent bonds between) amino, hydroxyl, sulfhydryl, and carboxyl organic functional groups; which denatures proteins and inactivates nucleic acids
-includes: glutaraldehyde, formaldehyde, and formalin
Term
glutaraldehyde
Definition
-liquid
-highly reactive chemical
-2% sol'n kills bacteria, fungi, and viruses
-disinfects in 10 minutes, sterilizes in 10 hours
-less irritating and more effective than formaldehyde, but more expensive
Term
formalin
Definition
-example of an aldehyde
-37% solution of formaldehyde dissolved in water
-used by morticians and health care workers for embalming, disinfection of isolation rooms, exhaust cabinets, surgical instruments, and reusable kidney dialysis machines
Term
formaldehyde
Definition
-must be handled with care b/c it disrupts mucous membranes and is a carcinogen
-typically diluted in water to form a 37% sol'n called formalin
Term
cross-linking
Definition
-formation of covalent bonds (that shouldn't be there)
-aldehydes cross-link functional groups such as amino, hydroxyl, sulfhydryl, and carboxyl groups in order to denature proteins and inactivate nucleic acids
Term
gaseous agents
Definition
-highly reactive microbicidal and sporicidal gases used within closed chambers to sterilize
-over time, functions by denaturing and DNA by cross-linking organic functional groups
-penetrates paper and plastic wraps and diffuse into every crack
-high level/sterilization
-includes: ethylene oxide, propylene oxide, beta-propiolactone
-must be used in very controlled environments (toxic)
Term
ethylene oxide
Definition
frequently used as a gaseous sterilizing agent in hospitals and dental offices and NASA uses this to sterilize spacecraft designed to land on other planets
Term
enzymes
Definition
-antimicrobial enzymes:many fungi produce chemicals that inhibit or destroy a variety of bacteria, fungi, and viruses
-include: lysozyme, Prionzyme
Term
lysozyme
Definition
-contained in human tears
-a protein that digests the peptidoglycan cell wall of bacteria, causing the cell wall to rupture because of osmotic pressure in the eye
-used by food processors to reduce the number of bacteria in cheese
Term
Prionzyme
Definition
-removes prions from medical instruments
-first noncaustic chemical to target prions
-approved in 2006 by the European Union
Term
antimicrobials
Definition
-includes: abx, semisynthetics, and synthetics
-typically used for the tx of disease, not for environmental control of microbes
-some for use outside the body; ie, nisin and natamycin (for cheese)
Term
antibiotics
Definition
-form of antimicrobials
-chemicals made by one type of organism that inhibits or kills another (ie: pcn, fungi that kills bacteria)
-"in other words": antimicrobials produced naturally by microorganisms
Term
semi-synthetic
Definition
-form of antimicrobials
-chemically modifying an abx or other natural chemical
Term
synthetics
Definition
-form of antimicrobials
-designed chemicals created in a laboratory
Term
nisin and natamycin
Definition
-forms of antimicrobials
-used outside of the body
-reduces the growth of bacteria and fungi in cheese
Term
resistant microbes
Definition
-little evidence that extensive use of antiseptics and disinfectants adds to human or animal health
-extensive use does promote the development of resistant microbes
-while susceptible cells die, resistant cells remain to proliferate
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