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Ch. 2 & 3
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130
Biology
Undergraduate 1
02/23/2010

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Term
Nucleus
Definition
contains protons and neutrons
Term
Protons
Definition
have a positive charge
Term
Neutrons
Definition
have no charge
Term
Atomic number
Definition
{number of protons} determines the element
Term
Elements
Definition
consist only of atoms with the same atomic number; pure substances
Term
Atoms
Definition
the building blocks of all substances. Made up of electrons, protons and neutrons.
Term
Electrons
Definition
have a negative charge, and move around the nucleus
Term
Charge
Definition
is an electrical property, attracts or repels other subatomic particles.
Term
isotopes
Definition
different forms of the same element, with different numbers of neutrons.
Term
Mass number
Definition
Total protons and neutrons in a nucleus, used to identify isotopes.
Term
Periodic table of elements
Definition
an arrangement of the elements based on their atomic number and chemical properties; created by Dmitry Mendeleev
Term
radioisotopes
Definition
emit the subatomic particles of energy when their nucleus breaks down, transforming one element into another at at constant rate.
Term
Tracer
Definition
any molecule with a detectable substance attached.
Term
Shell model
Definition
electron orbitals diagrams electron vacancies; filled from inside out
Term
Ion
Definition
an atomic with a positive or negative charge due to loss or gain of electrons in its outer shell.
Term
Chemical bond
Definition
an attractive force existing between two atoms when their electrons interact.
Term
Compounds
Definition
Molecules consisting of 2 or more elements whose proportions do not vary
Term
Molecule
Definition
Two or more atoms joined in chemical bonds
Term
Mixture
Definition
2 or more substances that intermingle but do not bond; proportions of each can vary
Term
Covalent bond
Definition
2 atoms with similar electro negativity and unpaired electrons sharing a pair of electrons
Term
Polarity
Definition
separation of charge into distinct positive and negative regions in a polar covalent molecule
Term
Ionic bond
Definition
a strong mutual attraction between 2 oppositely charged ions with a large difference in electronegativity [an electron is not transferred]
Term
Nonpolar covalent bond
Definition
atoms sharing electrons equally; formed between atoms with identical electronegativity
Term
polar covalent bond
Definition
atoms with different electronegativity dont share electrons equally; one atom has a more negative charge, the other is more positive
Term
hydrogen bond
Definition
a weak attraction between a highly electronegative atom and a hydrogen atom taking part in a separate polar covalent bond.
Term
hydrophilic
Definition
polar molecules that are dissolved by water [water loving]
Term
hydrophobic
Definition
nonpolar molecules that are not dissolved by water
Term
solvent
Definition
a substance [usually liquid]that can dissolve other substances. many hydrogen bonds pulls ions apart and keeps them dissolved
Term
temperature
Definition
a way to measure the energy of molecular motion. Molecules move faster as they absorb heat.
Term
evaporation
Definition
conversion of a liquid to a gas by heat energy
Term
pH
Definition
a measure of the number of hydrogen ions in a solution; the more the hydrogen ions, the lower the number.
Term
Acids
Definition
donate hydrogen ions in a water solution [pH below 7]
Term
Bases
Definition
accept hydrogen ions in a water solution [pH above 7]
Term
Salt
Definition
a compound that dissolves easily in water and releases ions other than H+ and OH-
Term
Buffer System
Definition
A set of chemicals [a weak acid or base and its salt] that can keep the pH of a solution stable.
Term
oxygen, hydrogen, carbon
Definition
Most abundant elements in living things
Term
Simple sugars, fatty acids, amino acids and nucleotides
Definition
the four major families of small building blocks
Term
monomers
Definition
small biological molecules
Term
polymers
Definition
large biomolecules
Term
functional groups
Definition
atoms or groups of atoms covalently bonded to a carbon backbone; they convey distinct properties, such a solubility and chemical reactivity, to the complete molecule.
Term
functional groups
Definition
specific groups of atoms within molecules that are responsible for the characteristic chemical reactions of those molecules
Term
enzymes
Definition
secreted by liver
Term
enzymes
Definition
are a special class of proteins that mediate five categories of reactions.
Term
functional-group
Definition
enzyme reaction that transfer from one molecule to another
Term
electron transfer
Definition
enzyme reaction where stripped from one molecule and given to another;
Term
rearrangement
Definition
enzyme reaction internal bonds converts one type of organic molecule to another;
Term
condensation
Definition
enzyme reaction changes two molecules into one;
Term
cleavage
Definition
enzyme reaction one molecule into two;
Term
hydrophobic
Definition
water insoluble
Term
hydrophilic
Definition
water soluble
Term
58
Definition
the number of elements that make up the human body?
Term
*Note*
Definition
*Note* The behavior of elements, which make up all living things, starts with the structure of individual atoms.
Term
Henri Becquerel
Definition
discovered radioisotopes of uranium
in the late 1800's
Term
Examples of Trace elements
Definition
Sodium, Zinc, Copper
Term
the number of electrons it has
Definition
the atoms interaction with other atoms depends on...?
Term
O, H, C, Ca, N, P
Definition
the 6 main elements found in the human body:
Term
sugar
Definition
ends in -ose
Term
enzyme
Definition
ends in -ase
Term
2 electrons
Definition
each orbital holds?
Term
decreases
Definition
the surface temperature of water_____ during evaporation
Term
O, H, C
Definition
most abundant elements in living things
Term
simple sugars, fatty acids, amino acids, and nucleotides
Definition
4 major families of small building blocks.
Term
hydroxyl, methyl, carbonyl, carboxyl, amino, phosphate, and sulfhydryl.
Definition
Common functional groups in biological molecules: [7]
Term
Hydroxyl
Definition
OH, Alcohols, Water Soluble
Term
Methyl
Definition
CH3, Fatty Acids, Water insoluble.
Term
Carbonyl
Definition
CHO, Sugars, Water soluble.
Term
Carboxyl
Definition
COOH, Amino Acids [AA], Water soluble.
Term
Phosphate
Definition
PO4, Nucleotides, Water Soluble.
Term
Sulfhydryl
Definition
SH, AA Cysteine, Stabilize protein.
Term
carbohydrates, lipids, proteins, and nucleic acids.
Definition
4 main groups of organic compounds that sustain lifes properties [biological molecules]
Term
5
Definition
Enzymes have how many categories of reactions?
Term
Condensation Reaction
Definition
One molecule is stripped of its H+, another is stripped of its OH-; the the 2 molecule fragments join to form a new compound and the H+ and OH- form water.
Term
Hydrolisis
Definition
the reverse of condensation; one molecule is split by the addition of H+ and OH- (from water) to components.
Term
Monosaccharides
Definition
one sugar unit, simplest carbohydrates.
Term
Monosaccharides
Definition
-water soluble, sweet taste, and have at least 2 OH groups and one aldehyde or ketone group
Term
Ribose and deoxyribose
Definition
[5 carbon backbone] are building blocks for nucleic acids
Term
glucose
Definition
6 carbon back bone; used by cells as instant energy
Term
Simple sugars
Definition
Monosaccharides
Term
short chain carbohydrates
Definition
oligosaccarides or dissacharides
Term
oligosaccharide
Definition
short chain of 2 or more sugar monomers
Term
Dissacharides
Definition
2 sugar units
Term
Sucrose
Definition
Most plentiful sugar in nature [glucose+fructose] --> table sugar
Term
Hexose
Definition
6 carbon backbone [glucose]
Term
Isomers
Definition
Same formula, yet atoms are arranged differently. [glucose & fructose]
Term
C6 H12 O6
Definition
sugar formula
Term
Lactose
Definition
present in milk [glucose+ galactose]
Term
Maltose
Definition
present in chocolate and beers [Malt sugar]
Term
Complex Carbohydrates
Definition
polysaccharides, starch, cellulose,glycogen, and Chitin
Term
polysaccharides
Definition
straight or branched chain of hundreds or thousands of sugar monomers.
Term
Starch
Definition
plant storage form of energy, arranged as unbranched coiled chains, easily hydrolyzed to glucose units [typical storage form of plants]
Term
Cellulose
Definition
fiberlike structural material--tough, insoluble-- used in plant cell walls.
Term
Ose
Definition
Sugar
Term
ase
Definition
enzyme
Term
glycogen
Definition
is a highly-branched chain used by animals to store energy in muscles and liver. [typical storage form in animals]
Term
Chitin
Definition
is a specialized polysaccharide with nitrogen attached to glucose units; and used as a structural material in arthropod exoskeletons and fungal cell walls.
Term
Lipids
Definition
nonpolar hydrocarbons that do not dissolve in water
Term
fats
Definition
have 1,2, or 3 fatty acids attached to 1 glycerol molecule. [make cell membranes, provides insulation]
Term
Fatty acid
Definition
long, unbranched hydrocarbon with a COOH group at one end.
Term
Unsaturated
Definition
fatty acids are liquids [oils] at room temp. because 1 or more double bonds between carbons in the tails permit "kinks" [come from plants]
Term
saturated
Definition
fatty acids that have only single carbon bonds in their tails and are solids at room temperature. [come from animals]
Term
triglycerides
Definition
the body's most abundant and richest source of energy and insulation [such as butter, lard, and oils]
Term
3
Definition
how many fa tails are attached to a molecule of glycerol?
Term
Note
Definition
triglycerides yield more than twice as much energy as carbohydrates
Term
phospholipids
Definition
have a glycerol backbone, 2 fa, a phosphate group , and a small hydrophilic group.
Term
Waxes
Definition
Long-chain FA attached to long-chain alcohols or C rings.
Term
Waxes
Definition
all are firm and repel water; ex: plant, cuticles, bee honey combs, and animal coverings.
Term
Sterols
Definition
have a backbone of 4 C rings, but no FA
Term
Sterols
Definition
are found in cell membranes in all eukaryotes, and in animals are most common as cholesterol.
Term
Cholesterol
Definition
can be modified to form sex hormones [testosterone and estrogen] bile salts and vitamin D
Term
Proteins
Definition
[polymers] function as enzymes, in cell movements, as storage and transport agents, as hormones, as anti-disease agents, and as structural material throughout the body. *over 400 found in the body*
Term
Amino Acids [AA]
Definition
[Monomers] small organic molecules with an amino group, an acid group, a hydrogen atom and an "R" group-- building blocks of proteins
Term
*note*
Definition
20 different R groups determine the 20 naturally occurring amino acids
Term
primary structure
Definition
the chain [polypeptide] of AA each linked together in a definite sequence by peptide bonds between an amino group of one unit and an acid group of another
Term
secondary structure
Definition
helical coil or sheetlike array into which polypeptide chain is formed by interaction of hydrogen bonds, which join the side groups of the amino acids [like old phone cords]
Term
tertiary structure
Definition
result of interactions among R groups that produce a complex 3 dimensional shape such as is found in globular proteins.
Term
globular
Definition
proteins found in hemoglobin [red blood cells]
Term
fibrous
Definition
collagen-provides flexibility, structure, and plumpness to the cell.
Term
Quaternary structure
Definition
describes the complexing of 2 or more polypeptide chains.
Term
glycoproteins
Definition
have side chains of oligosaccharides [sugar coating]
Term
Lipoproteins
Definition
bind and transport lipids
Term
Hemoglobin
Definition
is a highly organized protein consisting of 4 polypeptides, each with a heme group that can bind an oxygen molecule
Term
glutamate
Definition
the 6th AA in a normal beta polypeptide chain, when a mutation does not occur and substitutes a valine
Term
Note
Definition
Nucleotides--> monomers, Nucleic Acid--> polymers
Term
Nucleotide
Definition
has a 5 carbon sugar [ribose or deoxyribose], a nitrogen-containing base [single or double ringed] and a phosphate group
Term
ATP
Definition
most common nucleotide; has 3 phosphate groups attached to its deoxyribose sugar.
Term
ATP
Definition
is a molecule that provides energy for cellular metabolism
Term
coenzymes
Definition
transport hydrogen atoms and electrons
Term
NOte
Definition
In nucleic acids, a covalent bond forms between the sugar of one nucleotide and the phosphate group of the next.
Term
DNA
Definition
is the double stranded; genetic messages are encoded in its base sequences: adenine, guanine, cytosine, thymine.
Term
RNA
Definition
is single stranded; it functions in assembly of proteins.
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