Term
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Definition
intricate network of protein filaments that extend throughout the cytoplasm |
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Term
what are the 3 main components of the cytoskeleton |
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Definition
intermediate filaments actin filaments microtubule filaments |
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Term
what holds together the subunits of the cytoskeleton |
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Definition
non-covalent bonds hydrophobic interactions |
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Term
what are the 4 functions of the cytoskeletn |
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Definition
support cellular cytoplasm intracellular transport cell shape motility |
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Term
which type cytoskeltal filament is twisted like a cable |
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Definition
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Term
where are the 2 main locations where intermediate filaments are found |
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Definition
nuclear lamina surrounding nucleus and extending to cell periphery |
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Term
which types of cells would be high in intermediate filaments |
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Definition
any that stretch (intermediate filaments have high tensile strength) muscle, GI, epithelial, etc |
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Term
what are the 2 types of actin subunits? what is the difference? |
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Definition
G actin - 'free' actin, globular, not in a filament F actin - 'filamentous actin', assembled in filaments |
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Term
which type of actin subunit is bound to ATP |
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Definition
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Term
what is the plus end of an actin filament? |
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Definition
the end that is assembled and disassembled quickly |
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Term
what are 3 main actin functions |
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Definition
muscle contraction cleavage furrow formation cell movement |
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Term
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Definition
fingerlike projections of a cell formed by actin arrangement |
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Term
where is actin located in a cell? |
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Definition
dispersed throughout cytoplasm but most concentrated in cortex |
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Term
what is the cortex. what are its main roles? |
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Definition
the layer of cytoplasm just beneath the plasma membrane. high in actin concentration 1) maintain cell shape 2) help in formation of cell surface extensions (ex microvilli) |
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Term
what is the general structure of microtubules? |
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Definition
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Term
what protein are microtubules made of? |
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Definition
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Term
which cytoskeletal protein is a heterodimer |
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Definition
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Term
which tubulin protein is always GTP bound (does not bind GDP) |
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Definition
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Term
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Definition
tubulin dimers bound together in chains that make up microtubule walls |
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Term
what are the 4 main microtubule functions |
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Definition
intracellular transport anchoring intracellular organelles form mitotic spindle csome separation during cell division |
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Term
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Definition
the microtubule organizing center |
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Term
what is meant by dynamic instability |
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Definition
rapid interconversion between growing and shrinking state |
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Term
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Definition
when an elongating microtubule shifts rapidly to shrinking |
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Term
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Definition
when a shortening microtubuleshifts rapidly to elongation |
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Term
whhich type of cells have microtubules that are not dynamic? |
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Definition
neurons, axons packed w microtubules |
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Term
explain how microtubules find a cellular target |
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Definition
dynamic instability - grow in one direction, if they don't find something they disassemble and try again |
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Term
what is the general name of proteins that bind to microtubules |
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Definition
microtubule associated proteins (MAPs) |
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Term
what are the two main functions of MAPs |
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Definition
microtubule stability motor function |
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Term
what are the two main motor MAPs? what is the main difference |
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Definition
kinesin - moves toward + end dynein - moves toward - end |
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Term
what are the three main parts of a motor MAP |
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Definition
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Term
what MAP associated with muscle contraction |
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Definition
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Term
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Definition
a family of similar proteins that bind to actin filaments and hydolyze ATP to move in the + direction |
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Term
explain the structure of a myosin molecule |
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Definition
head domain/motor domain = 2 light chains tail domain = 2 heavy chains, twisted together |
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Term
what does the sliding filament model explain? |
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Definition
muscle movement in vertebrates. myosin molecules connect actin filaments, move in opp directions to pull filaments together. myosin fibers along a sarcomere 'walk' along adjacent actin strands, pulling the 'z line' together |
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Term
what is a sarcomere. what are 2 main connecting strands |
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Definition
a functional unit of skeletal muscle. thick filaments (mostly myosin) thin filaments (mostly actin) |
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Term
explain role of ATP in myosin movement |
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Definition
ATP attached to mysoin 1. hydrolysis to ADP causes conformationaly change to head region allowing it to bind actin 2. when ATP binds actin-bound myosin head get release from actin 3. repeat |
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Term
how is calcium involved in muscle contraction |
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Definition
when Ca is absent: tropomysin/tropin complex inhibits binding of actin and myosin when Ca present: tropomysin/tropin complex released, allows movement |
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Term
where is the calcium needed to initiate muscle movement stored in cells |
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Definition
in the sarcoplasmic reticulum (special type of smooth ER) |
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Term
summarize muscle contracton from impulse to contraction. |
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Definition
1. neurotransmitter triggeres surface receptor on cell 2. sarcoplasmic reticulum releases Ca 3. Ca causes tropomysin/tropin complex to release from actin 4. ATP-ADP causes myosin to bind actin 5. ADP-ATP causes mysoin to release actin 6. Adjacent actin filaments pulled together |
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Term
what role does actin play in the formation of a cleavage furrown |
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Definition
actin filaments make a ring around cell that 'cinches' together for cytokinesis |
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Term
what protein involved in contractile ring 'cinching' |
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Definition
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Term
when is the contractile ring formed |
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Definition
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Term
how are microtubules involved in cytokinesis of animal cells |
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Definition
carry vessicles (via motor proteins) containing phospholipids and proteins needed to form new cell membrane |
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Term
explain cytokinesis in plant cells in regards to cytoskeletal components |
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Definition
early Anaphase - small vessicles containing polysaccharides and glycoproteins needed to form cell wall travel from Golgi on microtubules via motor proteins and align along equatorial region of the spindle |
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Term
what are some examples of cells that move by protruding cytoplasm |
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Definition
stem cells, macrophages, sex cells, fibroblases, amoeba |
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Term
what are the 3 main events of cell locomotion through cytoplasm extension |
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Definition
protrusion adhesion contraction |
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Term
what is the protrusion of cytoplasm used for cell movement called. how is this formed |
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Definition
lamellipodium. myosin I pushes + end actin filaments against plasma membrane |
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Term
what proteins involved in the adhesion step of cell locomotion. what are they connected to |
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Definition
integrins. intracellular domain - connected to actin filaments extracellular domain - connected to ECM |
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Term
what happens in the contraction step of cell locomotion. what protein may be involved |
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Definition
back of cell contracts, pushing rest forward. myosin II may be involved |
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Term
what is the structure of kinesin and dynein. how diff from mysoin? what drives movement? how diff functionally |
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Definition
head - 2 globular heavy chains tail - 2 light chains, twisted (mysoin has light head, heavy tail) ATP driven kinesin - + end directed dynein - - end directed |
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Term
what drives microtubule movement? which microtubules are + directed |
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Definition
ATP kinesisn + myosin I/II = plus end directed dynein = neg end |
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Term
which MAP involved in csome attachemnt? separation? |
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Definition
kinesin - attachment (+ end) dynein - separation (- end) |
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Term
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Definition
complex of proteins + RNA that attach to centromere. link csome and spindle fiber |
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Term
what are 3 classifications of microtubules in cell division |
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Definition
astral microtubules -face csome side of centrosome polar microtubules - face pm side of centrosome kinetochore microtubule - astral mctble that is attached to csome |
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Term
how doea csome separtation occur |
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Definition
tubulin subunits taken off of both ends of microtubule (kintetochore end and centrosome end) |
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Term
which protein associated w centrosome end of microtubule? kinetochore end? |
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Definition
centrosome end (-) - kinesin kinetochore end (+) - dynein |
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Term
how do csomes align during metaphase? |
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Definition
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Term
what are growth factors? how linked to cancer |
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Definition
extracellular signal proteins that bind surface receptors and cause intracellular signaling resulting in expression of genes needed for cell division - in some cancer, growth factors are continually bound to their recpetors |
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Term
what is a main checkpoint involved in monitoring DNA replication |
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Definition
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Term
what are the 4 stages of the cell cycle |
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Definition
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Term
what is metastasis. how does it ocur |
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Definition
migration of cancer cells. 1) adhesion to neighboring cells broken 2) migration via actin filaments to other parts of the body |
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Term
what are 2 cancer drugs that target MTs? how diff |
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Definition
Vinblastine - binds MTs, causes disassembly Taxol - binds MTs, prevents disassembly |
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Term
other than cancer, what other disease have MTs been implicated in |
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Definition
Alzheimer's, Parkinsons - axon MTs should be fixed, may be collapsing in these disease |
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Term
how do proteins synthesized in cell find target in cytoplasm |
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Definition
localization signals - small aa sequences that are specific to destination |
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Term
what is the nuclear envelope |
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Definition
double nuclear membrane containing nuclear pore complex |
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Term
what is the basic structure of a nuclear pore |
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Definition
octagonal structure of repeating subunits called nucleoporins with fibrils extending into cytoplasm and nycleus making up the nuclear cage |
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Term
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Definition
fibrils associated w nuclear pore that extend into nucleus and into cytoplasm |
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Term
what types of molecules are transported into the nuc? out? |
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Definition
in = histones, nucleotides, helicase, transcription and replication enzymes out = mRNA, ribosomes |
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Term
what is facilitated diffusion |
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Definition
movement across a membrane through a channel |
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Term
how do small molecules such as water and ions travel across nuc membrane |
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Definition
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Term
explain transport of large molecules across nuc membrane |
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Definition
1. beta importin binds alpha importin to form active transport protein 2. transport protein binds adaptor proteins attached to nuc localization signal on molecule. 3. importins bind FG repeats on nucleoporins 4. GTP associated w pore is cleaved changing pore shape and allowing transport across memb. 5. importins released |
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Term
what is the benefit of adaptor proteins |
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Definition
allow importins to bind many diff nuc localization signals. |
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Term
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Definition
1. molecules have nuclear export signals 2. export signals bind nuc export receptors (soluble proteins) 3. export receptors bind nucleoporin 4. GTP cleaved to open pore 5. transported across |
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Term
what are the 2 types of ribosomes |
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Definition
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Term
explain how proteins transported into ER |
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Definition
1. cytosollic (free) ribosome begins translation of mRNA 2. ER signal sequence on protein directs ribosome to ER 3. Signal recognition particle releases from ER, attaches to signal sequence 4. Translation is paused 5. SRP binds SRP receptor on ER surface 6. SRP releases, returns to ER membrane, translation resumes 7. Peptide threaded through protein translocator/Sec61 pore protein |
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Term
what does cotranslational transport mean |
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Definition
tansport occurs as protein is being made (ex ER transport) |
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Term
what is the structure of SRP. what allows it to bind to many proteins |
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Definition
6 polypeptides w an RNA. has pocket of methionines (flexible, multi-binding) |
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Term
what enzyme cleaves a soluble protein after it is threaded into the ER? what portion left in membrane? |
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Definition
signal peptidase enzyme signal sequence left in membrane |
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Term
what sequence associated with a single pass TM protein? |
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Definition
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Term
what is unique about a multi-pass TM protein? |
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Definition
signal sequence is in the middle of the polypeptide |
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Term
why are chaperones needed in the lumen of the ER? |
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Definition
because proteins threaded in need to be refolded to be active |
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Term
what are 2 types of chaperone proteins |
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Definition
binding proteins heat shock proteins |
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Term
what are 2 ways that a chaperone protein can work |
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Definition
protect protein from misfolding lower energy |
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Term
what is one way a chaperone can protect a protein from misfolding |
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Definition
forming a larger aggregate that prevents degradation |
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Term
how can a chaperone lower energy required for a protein to fold? |
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Definition
add side chains and/or cause conformational change that lowers E required |
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Term
explain how protein import occurs in mitochondria and chloroplasts |
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Definition
protein synthesized on cytosollic ribosomes signal sequence casues migration to organelle protein imported signal peptidase cleaves protein (post translational import) |
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Term
explain an example of the symbiotic nature of mitochondria and nucleus |
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Definition
many transcription factors needed to activate mitochondrial/chloroplast DNA produced by nucleus |
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