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Cell Biology
Chapter 17
105
Biology
Undergraduate 3
11/10/2012

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Term
polarized, apical, basolateral
Definition
A sheet of cells known as the epithelium, such as the cells that line the small the small intestines. Such cells are clearly __--that is, they contain discrete functional domains at opposite ends of the cell. The end of the cell in contact with the external environment (ex lumen of small intestines) is often called the __ side of the cell. The parts on the other side of the tight junction, including the surfaces in contact with the basal lamina, are called the __ side of the cell.
Term
connective tissue
Definition
The cell type that forms a more loosely organized __ __, such as might be found in the dermis of the skin.
Term
basal lamina, cell wall, cell wall, rigidity, barriers, protect, attack
Definition
Epithelial cells, produce a specialized extracellular matrix called a __ __. Connective tissues, produce a more loosely organized matrix that, in plants, fungi, algae, and prokaryotes, is called a __ __. All though the chemical composition of the __ __ differs considerably among these organisms, they confer __ on the cells they encase, serve as permeability __, and __ cells from physical damage, and from __ by viruses and infectious organismes.
Term
tissues, organs, organ, cell-cell contact, intercellular junctions
Definition
The ablility of individual cells to associate in precise patterns to form __, __ and __ systems requires that idividual cells be able to recognize, adhere to , and communicate with eachother through __-__ __ and __ __.
Term
attach, transmembrane proteins
Definition
Animal cells use specialized adhesion receptors to __ to one another. Many of these adhesion proteins are __ __,which means the extracellular portion of these proteins can interact with the extracellular portion of similiar proteins onthe surface of neighboring cell.
Term
static
Definition
Adhesive structures are not __, they can move around within the plasma membrane.
Term
assemble,disassemble, endocytosis, exocytosis
Definition
Cells can __ and __ adhesions in response to a variety of events. Many adhesion proteins are continuously recycled: Protein at the cell surface is internalized by __, and new protein is deposited at the surface by __.
Term
signaling complexes, cytoskeletal structures
Definition
Adhesion proteins serve as key sites for assembly of __ __ in cells and for dynamically assembling __ __at sites of cell adhesion. In this way cell adhesion is coordinated with other major processes, including cell signaling, cell movement, cell proliferation, and cell survival.
Term
immunoglobulin superfamily, cadherins, selectins, ligand
Definition
Cell-cell adhesion receptors fall into a small number of classes including: __ __ (IgSF) proteins, __,  __ , and in a few cases integrins. In each case, the adhesion protein on the surface of one cell binds to the appropriate __ on the surface of a neighboring cell. 
Term
homophilic interactions
Definition
In cases where such as many cadherins and immunoglobulin superfamily members, cells interact with identical molecules on the surface of the cell that they adhere to. Such interactions are said to be __ __ ("like")
Term
heterophilic interactions
Definition
In other cases, such as the selectins and integrins, a cell adhesion receptor on one interacts with a different molecule on the surface of the cell to which it attaches. Such interactions are said to be __ __
Term
linker proteins
Definition
Many transmembrane adhesion receptors attach to the cytoskeleton by __ __, which differ depending on the class of molecule and its location within the cell.
Term
immunoglobulin superfamily
Definition
Cell adhesion molecules (CAMs) are members of the __ __ (IgSF). The founding member of this family is called the neural cell adhesion molecule (N-CAM).
Term
loops
Definition
Proteins in this large family are categorized here because they contain domains characterized by well-organized __, that are similiar to those in the immunoglobulin subunits that constitute antibodies
Term
homophilically, heterophilically
Definition
CAMs such as N-CAM, on once cell interact __ with CAMs on adjacent cell via those domains. Other IgSF members interact __ wither their ligands.
Term
neurons
Definition
Other IgSF members participate in a wide range of adhesion events. In the embryonic nervous system, CAMs, sucts as N-CAM and L1-CAM are involved in the outgrouwth and bundling of __. Humans with mutations in the L1-CAM gene show defects in the corpus callosum, memtal retardation, and other defects.
Term
cadherins
Definition
An important group of adhesive glycoproteins found in the membranes of most animal cells is called __. They play a crucial role in cell-cell recognition and adhesion.
Term
calcium, Ca+
Definition
CAMs and cadherins can be distinguished from eachother because cadherins require __ to function. __ binds to and stabilizes the conformation of cadherins that allows them to mediate cell-cell adhesion.
Term
similiar, repeats
Definition
Cadherins are characterized by a series of structurally __ domains (or repeats) in their extracellular domain. Members of the cadherin superfamily have a widely varying numbers of these __. 
Term
cell surface, cytoskeleton
Definition
At their cytosolic ends, cadherins associate with the cytoskeleton therby linking the __ __ to the __. These linkages differ for different types of cadherins.
Term
tissues, separate 
Definition
Different cadherins are expressed in specific __. Their regulated expression is a particularly striking feature of embryonic development and contributes to the ability of different tissues to __ from one another as embryos change their shape.
Term
bundles, synaptic connections
Definition
Other cadherins are involved in helping neuronal cells to form __ and to establish __ __.
Term
mesenchymal, epithelial-mesenchymal transition, metastasis
Definition
One particularly important event that occurs frequently in embryos is the breakdown of an epithelium into loosely organized, migratory cells called __ cells. This __-__ __ (EMT) is accompanied by changes in cadherin expression, which occurs in cancer cells and often stops the expression of cadherins which allows these cells to spread to other parts of the body known as __.
Term
carbohydrate, adhesion
Definition
Like other glycoproteins, the __ side chains of CAMs and cadherins likely affect their __ properties.
Term
lectins, sugar, sugars
Definition
Many animal and plant cells secrete carbohydrate-binding proteins called __, which promote cell-cell adhesion by binding to a specific __ or sequence of __ exposed at the outer cell surface.
Term
different, linking
Definition
Because lectins usually have more than one carbohydrate-binding site they can bind to a carbohydrate group on two __ cells, therby __ the cells together.
Term
selectins, cell type
Definition
Carbohydrate recognition plays an important role during the interaction of leukocyes with endothelial cells lining blood vessels or with platelets. Cell surface glycoproteins called __ mediate these interactions. A differnt selectin is expressed by each __ __ (L-selectin on leukocytes, E-selectin on endothelial cells, P-selectin on platelets).
Term
selectins
Definition
Rolling of leukocytes is mediated by __.
Term
integrins
Definition
Prior to invading a blood vessel, __ are activated.
Term
invasion
Definition
A firmer attachment must be made by an ICAM (IgSF) protein for __ of the blood vessel (endothelium) to occur.
Term
blood types, glycolipid
Definition
One especially well known example of the importance of carbohydrates at the cell surface is the determination of the human __ __ A, B, AB, and O by a specific carbohydrate side chain present on a __ of the erythrocyte plasma membrane.
Term
antibodies, clumping
Definition
The ABO blood groups involves differences in carbohydrate side chains on the surface of red blood cells that can be detected by __ present in the blood, leading to __ of red blood cells and likely to the patient's death if the wrong blood type is used in transfusion.
Term
GalNAc, Gal, GalNAc, Gal, none 
Definition
Individuals with blood type A have the amino sugar N-acetylgalctosamine (__) at the ends of this carbohydrate. Individuals with blood type B have galactos (__), instead. Individuals with blood type AB have both __ and __ , and individuals with blood type O contain __ of these terminal sugars.
Term
universal donors
Definition
Individuals with type O blood are called __ __ because their erythrocytes do not generate an immune response when transfused into individuals of any blood type.
Term
no
Definition
Unicellular organisms have __ permanent association between cells.
Term
tissues, organs, cell-cell junctions
Definition
Multicellular organisms have specific means of joining cells in long-term associations to form __ and __. Such associations usually involve specialized modifications of the plasma membrane at the point where the two cells come together. These specialized structures are called __-__ __.
Term
adhesive, tight, gap
Definition
The three most common kind of cell junctions are: __ junctions, __ junctions, and __ junctions.
Term
localized, integrity, stress 
Definition
Adhesive junctions link cells together into tissues therby enabling the cells to function as a unit. All junctions in this category anchor the cytoskeleton to the cell surface ( __ ). The resulting interconnected cytoskeletal network helps to maintain tissue __ and to withstand mechanical __. They stick like glue.
Term
adherens junctions, desmosomes, intracellular attachment, cadherins
Definition
The two main kinds of cell-adhesive junctions are __ __ and __. Despite structural and functional differences, adhesive junctions all contain two distinct kinds of proteins: __ __ proteins, which link the junction to the appropriate cytoskeletal filaments on the inside of the plasma membrane, and __, which protrude on the ouer surface of the membrane and bind cells to each other.
Term
adherens junctions, epithelial
Definition
Cadherin-mediated adhesive junctions that interact with actin are called __ __ . Especially prominent in the __ cells.
Term
cytoskeleton
Definition
Adherens junctions are points of attachment between the cell surface and the __.
Term
adhesion systems
Definition
Many pathogens such as those responsible for several types of food poisoning, infect the body using these very same __ __ to gain entry into healthy cells.
Term
Desmosomes, structural integrity, Desmosomes
Definition
__ are button-like points of strong adhesion between adjacent cells in a tissue. They give tissue __ __, enabling cells to function as a unit and to resist stress. __ are especially abundant in skin, heart muscle, and the nuck of the uterus.
Term
heart failure, skin defects
Definition
Loss of desmosomal components can be devistating. For example, mice lacking plakoglobin die with __ __ and __ __. 
Term
Tight junctions, water
Definition
__ __ are used to seal spaces between cells, they function similiar to a ziploc bag and are completely __ sealed. 
Term
seal, internal
Definition
These tight junctions are important in intestinal cells because they must __ off the fluids that pass through the digestive tract from the __ fluids of the body. They are similarly important in the liver, pancreas, and bladder.
Term
gates, fences
Definition
Tight junctions act like "__" prevent the movement of fluids, ions, and molecules between cells. In addition, tight junctions act like "__" blocking the lateral movement of lipids and proteins within the membrane.
Term
outer monolayer, entirely, opposite
Definition
Lipid movement is blocked in the __ __ only, but the movement of integral membrane protens is blocked __. As a result, different kinds of integral membrane proteins can be maintained in the portions of a plasma membrane on __ sides of a tight junction belt.
Term
gap junction, cytoplasmic contact, electrical, chemical
Definition
A __ __ is a region where the plasma membrane of two cells are aligned and brought into contact with a gap, spanned by molecular "pipelines." This provides a point of __ __ between two adjacent cells through which ions and small molecules can pass. It allows two adjacent cells to be in direct __ and __ communication with each other.
Term
connexon, connexins, innexins
Definition
At a gap junction, the two plasma membranes from adjacent cells are joined by tightly packed, hollow cylinders called __. In vertebrates, each connexin is a circular assembly of 6 subunits of the protein __. Invertebrates have the protein __ instead, but they appear to serve the same function.
Term
tissues, connexons
Definition
Many different connexins are found in different __, but each one functions similarly in forming __. The assembly spans the membrane and protrudes into the space, or gap, between the two cells.
Term
hydrophilic, ions, small
Definition
Each connexon has a hollow center that forms a very thin __ channel thorugh the membrane. It is just large enough to allow the passage of __ and __ molecules (too small for proteins, nucleic acids, and organelles). Included in this range are single sugars, amino acids, and nucleotides -- most of the molecules involved in cellular metabolism.
Term
muscle, nerve
Definition
Gap junctions occur in most vertebrate and invertebrate cells. They are especially abundant in tissues such as __ and __, where extremely rapid communication between cells is required (e.g. electrical synapse).
Term
electrical current
Definition
In heart tissue, gap junctions facilitate the flow of __ __ that causes the heart to beat.
Term
neurodegenerative, skin, cataracts, deafness
Definition
Disorders caused by defective gap junctions include several types of demyelinating __ diseases, various __ disorders, formation of __, and some types of __.
Term
extracellular materials
Definition
Tissues are not simply composed of cells. Cells interact with __ __ that are crucial for tissue structure and function. In animal cells, this extracellular matrix (ECM) takes on a remarkable variety of forms in different tissues. 
Term
bone, cartilage, connective tissue, basal lamina
Definition
__ consists largely of a rigid extracellular matrix that contains a tiny number of interspersed cells. __ is another tissue constructed almost entirely of matrix materials, although the matrix is much more flexible than in bone. The __ __ surrounding glands and blood vessels has a relatively gelatinous extracellular matrix conatining numerous interspersed fibroblast cells. Epithelial cell produce a specialized ECM known as the __ __.
Term
collagens, elastins, proteoglycans, fibronectins, laminins
Definition
Despite this diversity of function, the ECM of animals cells almost always consists of the same 3 classes of molecules: 1) structural proteins such as __ and __, which give the ECM its strength and flexibility. 2) protein-polysaccharide complexes called __ that provide the matrix in which the structural molecules are embedded. 3) adhesive glycoproteins such as __ and __, which allow cells to attach to the matrix. 
Term
structural proteins, proteoglycans, ratio, glycoprotiens
Definition
The considerable variety in the properties of the ECM in different tissues results not only from differences in the types of __ __ and the kinds of __ present but also from variations in the __ of structural proteins --collagen, most commonly-- to proteoglycans and in the kinds and amounts of adhesive __ present.
Term
ECM, collagens, elastins, cell wall, cellulose
Definition
Animals have an extracellular structure __ that has the structural fiber __ and __. Plants have an extracellular structure __ __ that has the structural fiber __.
Term
collagens
Definition
The most abundant component of the ECM in animals is a large family of closely related proteins called __, which form fibers with high tensile strengh and thus account for much of the strength of the ECM.
Term
fibroblasts
Definition
Collagen is secreted by several types of cells in connective tissues, including __. Without collagen, cells in these and other tissues would not have sufficient adhesive strength to maintain a given form. 
Term
triple helix, amino acid
Definition
Two defining characteristics are shared by all collagens: their occurrences as a rigid __ __ of three intertwined polypeptide chains and their unusual __ __ composition. 
Term
glycine, hydroxylysine, hydroxyproline
Definition
collagens are high in both the common amino acid __ and the unusual amino acids __ and __, which rarely occur in other proteins.
Term
laterally, end, end
Definition
Collagen molecules are aligned both __ and __ to __ within the fibrils.
Term
procollagen, procollagen, cell
Definition
3 α chains assemble to form a triple helix called __. At both ends of the triple-helical structure, short nonhelical sequences of amino acids prevent the fomation of of collagen fibrils, as long as the __ remains in the __.
Term
procollagen peptidase, laterally
Definition
Once the procollagen is secreted from the cell into the intercellular space, it is converted to collagen by __ __, an enzyme that removes the extra animo acids from both the N- and C-terminal ends of the triple helix. The resulting collagen molecules spontaneously associate to form mature collagen fibrils, which then assemble __ into fibers.
Term
hydrogen bonds
Definition
The stability of collagen fibril is reinforced by __ __ that involve the hydroxyl groups of hydroxyproline and hydroxylysine residues in the α chais 
Term
15, I
Definition
There are 15 types of collagen molecules. Type I, II, and III are the most abundant forms of collagen. Type __ makes up about 90% of the collagen in the human body.
Term
elastins, elastins, glycine, proline
Definition
Elasticity is provided by stretchable elastic fibers, whose principle constituent is a family of ECM proteins called __. Like collagen, __ are rich inthe amino acids __ and __. However the proline residues are hot hydroxylated, and not hydroxylysine is present.
Term
covalent bonds, stretch, relax
Definition
Elastin molecules are crosslinked to one another by __ __ between lysine residues. Tension on an elastin network causes the overall network to __. When the tension is released, the individual molecules __, returning to their normal, less extended conformations.
Term
crosslinked, inflexible, flexible, wrinkled
Definition
Over time, collagens become increassingly __ and __, and elastins are lost from tissues like skin. As a result, older people often find that their bones and joints are less __, and their skin becomes __.
Term
proteoglycans
Definition
The hydrated, gell like network in which the collagen and elastin fibrils of the ECM are enmeshed consists primarily of __, glycoproteins in which a large number of glycosaminoglycans are attached to a single protein molecule.
Term
glycosaminoglycans (GAGs), chondroitin sulfate, keratan sulfate, hyaluronate
Definition
__ ( __ ) are large carbohydrates characterized by repeating disaccharide units, for the three most common types: __ __,  __ __, __.
Term
hydrophobic, water, cations
Definition
Because GAGs are __ molecules with many negatively charged sulfate and carboxyl groups, they attract both __ and __, therby forming the hydrated gelatinous matrix in which collagen and elastin fibrils become embedded.
Term
proteoglycans, core protein
Definition
Most glycosaminoglycans in the ECM are covalently bound to protein molecules to form __. Each proteoglycan consists of numerous GAG chains attached along the length of a __ __. Many types of proteoglycans can be formed by the combination of different core proteins and GAGs of varying lengths and types. Most are huge.
Term
free glycosaminoglycans, hyaluronate
Definition
Although most of the GAGs foud in the extracellular matrix exist only as comoponents of proteoglycans and not as __ __, __ is and exception. 
Term
lubricating, reduced
Definition
In addition to its role as the backbone of the proteoglycan complex in cartilage, hyaluronate occurs as a free moleucle consisting of hundres of even thousands of repeating disaccharide units. Hyaluronate molecules have __ properties and are most abundant in places where fricion must be __, such as joints between movable bones.
Term
adhesive glycoproteins, domains, macromolecules, membrane receptors
Definition
Direct links between the ECM and plasma membrane are reinfroced by a family of __ __ that bind proteoglycans and collagen molecules to each other and to receptors on the membrane surface. These proteins typically have multiple __, some with binding sites for __ in the ECM and others with binding sites for __ __.
Term
fibronectins, laminins, integrins
Definition
The two most common kinds of adhesive glycoproteins are __ and __. Many of the membrane receptors to which these glycoproteins bind belong to a family of transmembrane proteins called __.
Term
Fibronectins, soluble, insoluble, intermediate
Definition
__ are a family of closely related glycoproteins in the ECM and are widely distributed in vertebrates. They occur in __ form in blood and other body fluids, as __ fibrils in the extracellular matrix, and as __ form loosely associated with cell surfaces. These different forms of the protein are generated because the RNA transcribed form the fibronectin gene is processed to generate many different mRNAs.
Term
polypeptide, carboxyl
Definition
A fibronectin molecule consists of two very large __ subunits that are linked near their __ ends by a pair of disulfide bonds.
Term
macromolecules, cell surface receptors
Definition
Several of the domains bind to one or more specific kinds of __ located in the ECM or on cell surfaces, including several types of collagen, heparin, and the blood-clotting protein fibrin. Other domains recognize and bind to __ __ __.
Term
arginine-glycine-aspartate, motif, integrins
Definition
The receptor-binding activity of these domains has veen localized to a specific tripeptide sequence, RGD (__-__-__), which is a common __ among extracellular adhesive proteins and is recognized by various __ on the cell surface.
Term
collagen, heparin, bridging, anchoring
Definition
Fibronectin binds to cell surface receptors as well as to ECM components such as __ and __. It thus functions as a __ molecule that attaches cells to the ECM, and therefore has a __ role. 
Term
cellular movement, adhere, binding
Definition
Fibronectin is also involved in __ __. For example, when migratory embyronic cells are grown on fibronectin, they __ readily to it. The pathways followed by migrating cells are rich in fibronectin, suggesting that such cells are guided by __ to fibronectin
Term
musculature, vasculature, embryonic
Definition
Genetically engineered mice that cannot produce fibronectin have severe defects in some cells that make the __ and the __. These defects highlight the crucial importance of fibronectin during __ development.
Term
fibronectin, shape, detachment, normal, bind, malignant
Definition
A possible involvement of fibronectin in cancer is suggested by the obsevation that many kinds of cancer cells do not synthesize __, with an accompanying loss of normal cell __ and __ from the ECM. If such cells are supplied with fibronectin, they often return to a more __ shape, recover their ability to __ to the ECM, and no longer appear __.
Term
plasma fibronectin, promoting, fibrin, fibrin
Definition
The soluble form of fibronectin present in the blood, called __ __, is involved in __ blood clotting becasuse it has several binding domains that recognize __, the blood clotting protein, and it can attach platelets to __ as the blood clot forms.
Term
laminins, invertebrates
Definition
Another major adhesive glycoprotein present in the ECM is a family of proteins called __, which are conserved from simple __ to humans. 
Term
basal lamina, epithelial, connective tissues
Definition
Unlike fibronectins, which occur widely throughout supporting tissues and body fluids, laminins are found mainly in the __ __. This thin sheet of specialized extracellular material underlies __ cells, therby separating them from __ __, and also surrounds muscle cells, fat cells, and Schwann cells that form myelin sheaths around nerve cells.
Term
structural support, permeability barrier
Definition
The basal lamina serves as __ __ that maintains tissue orgainzation and as a __ __ that regulates the movement of molecules as well as cells.
Term
thick
Definition
In the kidneys we have an extremely __ basal lamina which functions as a filter that allows small molecules but not blood proteins to move from the blood to the urine.
Term
connective tissue, white blood cells, increased, migrate
Definition
The basal lamina beneath epithelial cells prevents passage of underlying __ __ cells into the epithelium but permits the migration of the __ __ __ needed to fight infections. This effect of the basal lamina on cell migration is of special intrest because some cancer cells show __ binding to the basal lamina which may facilitate their movement through it and allow them to __ from one region of the body to another. 
Term
IV, proteoglycans, laminins, entactin, nidogen, epithelial cells, anchor
Definition
All forms of basal lamina contain type __ collagen, __, __, and other glycoproteins called __, or __. Laminins are the most abundant adhesive glycoproteins in the basal lamina, and they are thought to be localized mainly on the surface of the lamina that faces the overlying __ __, where they help bind the cells to the lamina. Fibronectins are located on the other side of the lamina, where they help __ cells of the connective tissue.
Term
MMPs, cofactors, MMP, high
Definition
Cells can alter the properties of the basal lamina by secreting enzymes that catalyze changes in the basal lamina. One important class of such enzymes is matrix metallproteinases ( __ ). These enzymes, which require metal ions as __, degrade the ECM locally, allowing cells to pass through the ECM. This activity is important for cells such as leukocytes to invade injured tissues during inflammation, and the __ activity of invasive cancer cells such as metastatic melanoma cells, is very __.
Term
polypeptides, disulfide, 3-stranded coil
Definition
Laminin is a very large protein consisting of 3 large __ denoted α, β, and γ. There are several types of each of the 3 subunits, which can combine to form many types of laminin. __ bonds hold the polypeptide chains togeter in the shape of a cross, with part of the long arm wound into a _-__ __.
Term
bridging, basal lamina
Definition
Like fibronectin, laminin consists of several domains that include binding sites for type IV collagen, heparin, heparan sulfate, and entactin, as well as for laminin receptor proteins on the surface of overlying cells. Its binding sites allow laminin to serve as a __ molecule that attaches cells to the __ __. 
Term
laminin, IV collagen
Definition
Entactin molecules have binding sites for both __ and type __ __ and are therefore thought to reinforce the binding of type IV collagen and laminin networks in the basal lamina.
Term
receptors, integrins
Definition
Fibronectins and laminins can bind to animal cells because the plasma membranes of most cells have sepcific __ on their surfaces that recognize and bind to specific regions of the fibronectin of laminin molecule. These receptors -and those for a variety of other ECM constituents- belong to a large family of transmembrane proteins that are called __ because of their role in integrating the cytoskeleton with the ECM.
Term
collagen, fibronectin, laminin
Definition
Integrins are important receptors because they are the primary means by which cells bind to ECM proteins such as __, __, and __.
Term
noncovalently (ionic), specificity
Definition
An integrin consists of two large transmembrane polypeptides, the α and β subunits, that associate with eachother __ ( __ ). Integrins display a greater __ of glycoproteins binding than can be accounted for by the RGD sequence alone.
Term
 indirectly
Definition
Integrins link the ECM and the cytoskeleton together __ by interacting with protens in the cytosol that link integrins to cytoskeletal proteins.
Term
cell movement, cell attachment
Definition
Integrins play important roles in regulating __ __ and __ __. Mutations in integrins lead to progressive muscular dystrophy and progressive muscul degeneration.
Term
signaling pathways
Definition
A key role of integrins is the ability to link the cytoskeleton and the extracellular matrix, they also interact with intracellular __ __. For ex. signals such as binding growth factors that lead to MAP kinase activation can result in integrin clustering (inside out). They can also act as a receptors that activate intracellular signaling themselves (outside in).
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