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Cell bio Mid 2
second mid term
150
Biology
Undergraduate 2
11/01/2010

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Term

Cell junctinos are interactions between what?

(2 examples)

Definition

cells and a substratum (ECM)

 

or between cells

Term
Cell junctions provide intergrety of?
Definition
multicellular organisms
Term
What do multicellular organsims depend on in terms of cell junctions?
Definition
Depends on specific associations of cells in precise patterns to form tissues, organs (systems) ect.
Term
List and describe 3 types of cell junctions
Definition

1. adhesive junction- link cells together or cells to extra cellular matrix

 

2. tight junctions- link cells together

 

3. gap junctions- provide cell-to-cell communication

Term
what are two types of adhesive junctions?
Definition
desmosomes and hemidesosomes
Term
when cells are linked by adhesive junctions, they form?
Definition
a functioning "unit"
Term
The process of adhesive junction involves?
Definition
anchoring cells cytoskeleton to another cells cytoskeleton or to extra cellular membrane that surronds cell.
Term
A tissues integritiy is maintained by what? and how?
Definition
interconnected cytoskeleton which helps the tissue withstnad mechanical stress/stretching
Term
Are adhesive junctions present in all tissues? where are they most prominent and why?
Definition
they are present in all tissues, but are most prominent in heart muscles, and skin epithelium because they are subjected to increased mechanical stress.
Term
Describe what demisomomes attach to and their adhesion.
Definition
desimsomes attach cell-to-cell and have "button like" points of strong adhesion between adjacent cells in tissues.
Term
describe 3 functions of desmosomes
Definition

procide strcutral integrity,

resist stress,

allow connected cells to form as a "unit"

Term
desmosomes are found in many tissue types but are most abundant in?
Definition
skin, heart, muscle that require strong "connections"
Term
Desmosomes form during _____ __________ __________ and maintain cell postioning ____________.
Definition

Desomeoms form during ealy embyronic development

 

and maintain cell positioning therafter

Term
define the desmosome core.
Definition
A ~30nm extraceullar space between two adjacent cells' permiable membranes alined in parallel.
Term
Describe plaque
Definition
a 1μm diameter "button" on the cytosolic side (surface) of the periable membrane of both cells. It consists of various intraceulluar attachment protiens.
Term
desmosomes core is filled with protiens that:
Definition
interact with the plaque and other eachother to mediate cell-cell adhesion
Term
the desmosome consits of transmembrane linker protiens that are called?
Definition
 cadherins
Term
What do cadherins mediate?
Definition
cell to cell adhesions
Term
A large group of integral membrane proteins the mediate cell to cell adhesion
Definition
cadherins
Term
Do the same cadherins occur in every cell type?
Definition
No, specific cadherins occur in specific cell types
Term
cadherins posses what type of binding properties?
Definition

homophilic

 

(which means:)

binds identical cadherins on the surface of an adjacent cell

Term
cadherins helps to form cells into _______________ and to maintain their ________________
Definition
cadherins helps to form cells into coheisve tissues (embyro) and to maintian their adhesion (adult)
Term
during formation of embryo, cahderins allow "mixed" cells to?
Definition
be sorted.
Term
describe 3 structral regions of cadherins
Definition

1. small cytoplasmic region which associtaes with plaque regions

2. single TMD

3. large extracellular region that includes several repeat domains

Term
what role do Ca2+ ions play in cadherins?
Definition
They are positioned between domains to maintain rigid (rod like) conformation.
Term
What happens to desmosomes if Ca2+ is washed away from tissue?
Definition
they are disrupted
Term
how are cell adhesion zippers formed?
Definition
repeat domains of apposing 'like-cadherins' associate latterally
Term
decribe plaque
Definition
A desmosomes structre which inner (cytoplasmic) surface contains a mixture of intraceulluar attachment protiens
Term
desmosomes includes prtoeins called?
Definition
desmoplakins and plakoglobins
Term
desmosome anchor to
Definition
intermediate filaments of the cytoskeleton called tonofilaments
Term
tonofilaments extend from
Definition
desmosome into the cell.
Term
describe how desmosomes serve as a supportive function
Definition
they link intermediate filaments  connected to other plaques within the cell and link adjacent cells to form a continuous cytoskeleton network throughout the tissue.
Term
Hemidesosomes are
Definition
an adhesive junction that tightly connects (anchors) a cell to the ECM of the basal lamina (baesment membrane eg epithelial layer)
Term
a hemidesomsomes is _____ a desmosome
Definition
'half'
Term
Where is plaque located on hemidesmosome?
Definition
on the inner surface of the p.m.
Term
hemidesmosomes consist of what protien?
Definition
plectin-(intracellular attachment protien)
Term
in hemidesomsomes, plectin links to what? and serves as?
Definition
plectin links to intermediate filatments (tonofilaments) of the cytoskeleton that extend itno the cell, and to a 'transmembrane linker protien'; serve a supportive function
Term
what does integrin anhor to in hemidesmosomes?
Definition
to laminins in the ECM (laminin receptor)
Term
as a general rule, cadherins link cells to_______ while intergrins link cells to ________
Definition
cadherins link cells to cells, while intergrins link cells to teh ECM
Term
Tight Junctions serve as? describe.
Definition
'seals', they are closest contacts between cells with littler or no extraceullar space between adjacent cell's pm.
Term
tight junctions prevent what?
Definition
flow of molecules and ions from one sdie of a cell layer to the other
Term
Tight junctions serve as what type of barrier?
Definition
selectively permeability
Term
what was observed during electron-opaque tracer studies (via TEM) of tight junctions?
Definition
that tracer molecules can move between adjacent cells (through ECM- the interceullular pathway) until they encoutner a tight junction. Some ions/ solutes allowed to pass through while others do not.
Term
intercellular and intracellular mean?
Definition

interceullular- between cells (equivalent to the extracellular space)

intracellular- within a cell

 

Term
tight junctions are prominent in?
Definition
epithelial cells
Term
Tight junctions act as ____ and form what at apical end of adjacent cells (tissue/organ)?
Definition
Tight junctions act a "fences" and form a conintuosu belt/barrier at apical end of adjacent cells.
Term
what causes liquid from intestine/vessel to be unable to cross layer?
Definition
tight junctions
Term
What helps to form the blood-brain-barrier? Descirbe the blood-brain barrier.
Definition
Tight junctions help to form blood brain barrier. it blocks certain solutes (including drugs) from leaving blood vessels and entering brain; but do allow pasages of cells of immune system.
Term
What arethe signals the open tight junctions?
Definition
SEE LECTURE 8 HANDOUTS IN THE "SUPPORTING MATERIALS" FOLDER ON COURSELINK!!
Term
Describe membrane positions in terms of tight junction strucutre.
Definition
membranes in close contact at various 'points'
Term
describe freeze fracture EM. what can be observed?
Definition

used to observe the innner surface of the plasma membrane bilayer leaflet

can observe 'ridiges' foremd by paired rows of aligned integral membrane protiens.

Term
tight junction 'ridges' are composed of
Definition
transmembrane junctional (linker) proteins.
Term
name two types of tight junctions
Definition
occludins and claudins
Term
what regulates permeabilty of tight junction?
Definition
claudins
Term
number of 'ridigids' in tight junctions correlate with?
Definition
correlatse with the overall tightness of the seal between cells.
Term
transmembrane junctional protiens (occludins and claudins) also prevent lateral movement of what?
Definition
other membrane protiens and lipids in the pm.
Term
Do tight junctions promote membrane symetry? elaborate.
Definition
no, they promote membrane asymetry. different membrane prtoiens (lipids) are maintained in different portions of the pm on opposites sides of tight junction.
Term
epithelial cell is a good example of tight junction because?
Definition

it is a polarized cell with different functional domains in the plamsma membrane

 

Na/glucose pump in the apical pm

 

cell to cell junctional protiens in the lateral pm.

Term
gap junctions are atype of ___________ junction. Is a region where ___________________________________
Definition
gap junctions are a tpye of cell to cell junction. Is a region where plamsma membranes of adjacent cells are tightly aligned.
Term
Describe the contact points of a gap junction.
Definition
2-3 nm 'gap'/extracellular space between adjacent pm.
Term
Gap Junctions serve as what type of cytoplasmic connections between cells?
Definition
Electrical and chemical connections
Term
which type of junction is refered to as a "doorway"
Definition
gap junction
Term
Desribe the strucutre of Gap Junctions
Definition

two pm from adjacent cells joined by tightly packed hollow cylinders/particles called connexons (7 nm diameter)

cylainders alighed forming direct hydrophilic channels between the opposing cells

 

5-1000 connexons per gap junction plaque

Term
Desribe the structure of a connexon.
Definition

Circular assembly of six identical intergral membrane protein subunits- connexins

 

 

Term
Desribe where each connexin spans.
Definition
connexin span the pm (contains a transmembrane domain) and extends into inter (extra)- and also intra-cellular spaces
Term
connexins form what type of channel?
Definition
a hydrophilic channel
Term
connexins are a large family of?
Definition
proteins
Term
true or false, connexins posses specificity? elaborate.
Definition
true, connexins have homo/heterohilic binding with only certain other connexin subunits on an adjacent cell.
Term
connexins provide what kind of role in communication between same/ diff cell types in an organ?
Definition
promoting or preventing.
Term
BE ABLE TO DRAW AND LABEL A HEMIDESOSOME
Definition
......just do it....
Term

Which of the following strucutures help form the blood brain barrier by restricting the movement of extraceulluar material between adjacent cells?

 

a) gap junctions

b) tight junctions

c) desmosomes

d) focal adhesion

e) adherens junction

Definition
b) tight junction
Term
What is the major protein in the gap junction?
Definition
connexin
Term
What do desmosomes link?
Definition
link cells to cells
Term
what are at desmosomes core?
Definition
cadherins
Term
what are the 2 proteins that are found in  desosomes plaque? where do they bind?
Definition

desmoplakin and plakoglobin

 

bind to cadherins and tonofilaments

Term
What part of the cytoskeleton links to plaque?
Definition
tonofilaments (IFs)
Term
Describe structure of cadherins
Definition

small cytoplasmic domain

single TMD

large exracellular domain

Term
what does the small cytoplasmic domain of cadherins associate with?
Definition
plaque protiens
Term
what type of binding occurs in the large extracullalur domain of cadherins?
Definition
homophilic binding "cell adhesion zippers"
Term
What do Hemidesmosomes link to?
Definition
links cells to the ECM
Term
an integrin is an anchor to what?
Definition
laminins in the ECM.
Term
What is the main protien in hemidesmosomes plaque? what does it bind to?
Definition
plectin and it binds to integrin and tonofilaments
Term
Describe how tight junctions are "seals"
Definition
they prevent flow of molecules and ions from one side of a cell layer to the other
Term
what type of permeablility do tight junctions have?
Definition
selective permeabaility
Term
What two proteins do tight junctions consist of? what type of protiens are they?
Definition

occludins and claudins

 

are transmembrane junctional proteins.

Term
which type of junction mediates membrane protein and lipid asymmetry within the pm?
Definition
tight junctions
Term
which type of junction serves as a membrane bilayer "fences"
Definition
tight junctions
Term
which type of junction serves as cytoplasmic connections "doorways"?
Definition
gap junctions
Term
gap junctions conist of aligned? via?
Definition
connexons in adjacent pm. via homo/heterophilic binding
Term
gap junctions procide intracellular communication between
Definition
same/different cell types in a tissue/organ
Term
each connexon is a circular assembly of?
Definition
six connexin proteins
Term
together, connexins form a _______nm ________pore/channel.
Definition
together, connexins form a ~3 nm hydrophilic pore/channel
Term
which junction allows passage of ions and small molecules?
Definition
gap junction!
Term
in gap juctions, pore opening/closing is regulated by____ and meidates?
Definition

[Ca2+ ]  which mediates the conformational changes in connexin subunits

 

 

 

 

 

 

Term
in terms of extracellular space, animals posses an ____ while bacteria, fungi and plants posses _______
Definition
animals posses an ECM while others posses cell walls.
Term
describe 5 propeties of plant cells dictated by the cell wall.
Definition

1. provide rigidity/strength- maintain cell shape and allow cells to withstand turgor pressures

 

2. extracellular metabolsim- site of cell wall enzymes

 

3.protection from pathogens (mechanical injuries)

 

4.mediate cell to cell interaction/adhesion and signaling between cells

 

5. serve as a permeability barrier- gases, water, ions, hormones, surgar, and amino acids diffuese freely thrhough cell walls.

Term
describe 3 main groups of compents of plant cell wall. compare it to animal ECM
Definition
  1. structual proteins- cellulse fibrils- rigid, fiber like shape (provide strength). like collagen and elastin in ECM
  2. polysaccharides- pectins- a matrix in which structural proteins and adhesive molecules are embedded. like proteoglycans in ECM
  3. adhesive molecules- hemicellulose (branched polysaccharides) extensins (glycoproteins). like fibronectins and laminins in ECM.
Term
What all link together to form a rigid, interconnected 3D network? (the cell wall)
Definition
structural protiens, polysaccharides, and adhesive molecules.
Term
What is the structural compent of the cell wall and of ECM?
Definition
cellulose for cell wall and collagen for ECM
Term
A polysaccharide is a long, unbranched polyer of 1000's of?
Definition
glucose units
Term
50-60 cellulose molecules (chains) twisted in a rope like fashion form?
Definition
microfibril
Term
How are microfibrils stabilized?
Definition
By H-bonds between adjacent polysacharide (sugar) chains.
Term
In cellulose chains, laterally alinged (side by side) microfibrils can from?
Definition
macrofibrils
Term
What is assositated with the matrix in cell wall and ECM?
Definition
Pectins in cell wall and proteoglycans in ECM
Term
What has a backbone and several side chains (branches) made up of repeating sugar units?
Definition
branched polysaccharides
Term
What charge is on the sugars in pectin? how do they work to create the matrix? (meniton conistency)
Definition

All surgarsr are negatively cahrged.

 

 

They bind/trap wter molecules to yield matrix with gel like to very rigid consisentcy

Term
the structural nautre of matrix (and thus cell wall) is dependent on?
Definition
types/ratios of pectin sugars
Term
List and dissucss four functions of pectin
Definition

1. cell adhesion - cross-linking to other pectins and other cell wall components and thus allows adjacent cell walls to bind together

 

2. determine cell wall porosity- increase in pectins means decrease in porosity of cell wall

 

3. pectin fragments serve as signialing molecules when cell wall is damaged physically by a pathogen- initate a plant defence responce (via receptor at plasma membrane)

 

4. gel-forming capacity- add pectins to fruit juice to make jams and jellies

Term
what are the adhesive molecules in the cell wall and ECM?
Definition
in the cell wall hemicellulose and in the ECM fibronectin/laminin
Term
is hemicellulose "half" a cellulose?
Definition
no, its strucutred differently.
Term
In the cell wall, waht functions to bond cellulose fibril and form a rigid interconnected 3D network?
Definition
Hemicellulose
Term
What are the adhesive molecules for the cell wall and for ECM
Definition
For the cell wall, extensins and for the ECM fibroncectin/laminin
Term
What is glycoprotein? Where is it found?
Definition
It is long polypeptide backbone attached to numerous sugar side cahins (branches). It is found in Extensis
Term

Glycoprotein's poly peptide chain is rich in?

Describe how this amino acid bind to pectin molecules.

Definition
polyeptide is rich in lysine residues, and the +ve charged amino acid binds to the -ve charged pectin molecules.
Term
What do extensins form in the cell wall?
Definition
they form a rigid and rod shaped protein-polysaccharide complex that is able to cross link to pectin, cellulose, hemicellulose and other extensin molecules
Term

True of False

 

are all the various compents sectreted from cell at pm into the extraceullar space at random?

Definition

False

 

all of the various componetns secreted from cell at pm into the extracelllular spaceu in a coordinated,stepwise manor.

Term
What are the three sites of synthesis of cell wall compents? What do they synthesize?
Definition

ER - extensins and other cell wall proteins

Golgi- pectins, hemicellulose, and protein modifications (such as sugar additions to extensins)

plasma membrane- cellulose

Term
describe what purpose exocytosis has.
Definition
trasnfers newly synthesized cell wall compents syntehsized at the ER and/or Golgi to pm.
Term
following cell division what is the name of the first layer of the cell wall? What is it mostly composed of?
Definition

the middle lamella

 

composed of mostly "sticky" pectin (matrix polysaccharide)

Term
which layer of the cell wall is shared by neighboring daughter cells?
Definition
the first layer; middle lamella
Term
What is the second layer of the cell wall to form? when does its formation occure?
Definition

the Primary cell wall

forms while cells are still growing

Term
What does the primary cell wall consist of?
Definition
consists of loosely organized microfibrils
Term
Individual microfibrils are generated by?
Definition
cellulose synthesizing enzyme complexes
Term
individual microfibrils consist of six individual ____________________________ organized togerther into a ring like sturcutre called a ________________
Definition
individual microfibrils consist of six individaul celllose synthase enzymes orgniazed together together into a ring like structure calle a particle rosette
Term
particle roesttes move which whay in the plane of the pm?
Definition
laterally
Term
new microfriblis in the cell wall are depostied where? and 'anchored' where?
Definition

new microfibrils are depostied outside of the cell- in the extracellular space

 

new microfirils are thne 'anchord' (connected) to other cell wall components.

Term
direction of particle rosette movement dictated by their bindg to
Definition
intracellular microtubules (cytoskeleton) orientated along the inner surface of the pm.
Term
What is the third layer formed in the cell wall? What is specific about this layer? (ie where does it form specifically?)
Definition

secondary cell wall.

 

occurs in only certain plant cells that require a thicker, more rigid cell wall.

Term

The secondary cell wall consitst of how many layers of cellulose?

Each layer consisting of bundles of microfibrils arranged in paralel to from?

Definition

three layers

 

larger macrofibrils

Term
In the seconday cell wall, strength and rigidity is achieved by
Definition
macrofibrils in different layers orientated at different angles.
Term
Surrounded by a solid cell wall bariier, how do plant cells communicate with eachother?
Definition
plasmodesmata- cytoplasmic connections between adjacent plant cells.
Term
plasmodesmata is formed during
Definition
cell divsion while new cell wall is being formed
Term
The plasmodoesmata consists of a ______ whisch is a tubular membrane strucutre located within the cahnnel opening
Definition
desmotububle
Term
name three components of the plasmodesmata and decribe each
Definition

desmotubule- tubular membrane strucutre loacted within the channel opening

annulus- ring of cytosol continuous between adjacent cells, and servers as a 'filter' to allow only small molecules to pass through from cell to cell

protein particles- globular and spoke-shaped protiens attached to pm and desmotuble membrane

Term
In the plasmodesmata, how is the size of the opening/annulus regulated?
Definition
most unkown except for stuies with plant virus movement proteins were virus portiens interact with plamsodesmata and (somehow) increase the diamter of the annulus and allows for virus to move from cell to cell during the infection process.
Term
BE ABLE TO DRAW AND LABEL A PLASMA!!!!!!
Definition
Term
The cytoskeleton is a complex and dynamic network of?
Definition
uinterconnected filaments and tubules
Term
What provides arictecutal framework/ structure for eukaryotic cells and internal orgainzation?
Definition
Cytoskeleton
Term
Name the 5 cellular processes the cytokseleton is involved in:
Definition
  1. structural support
  2. postion membrane bound organeels wihtin the cytosol
  3. serve as 'highways' for movement of materials to specific parts of the cell
  4. cell movement
  5. cell division
Term
Which part of the cell acts as a 'scaffold'?
Definition
cytoskeleton
Term
which part of the cell assisnt with movement of organelles and vesicles within the cell?
Definition
cytoskeleton
Term
Which part of the cell is in charge of sorting protiens and RNA, anchoring of soluble cytoslic enzymes of the same pathway, and transport of the attached moelcuels?
Definition
cytoskeleton
Term
Which part of the cell is a force generating apparatus?
Definition
cytoskeleton
Term
describe movement of both single cell and multi-cellular organisms.
Definition

single celled- movement 'crawling' due to changes in teh cell shape or specialzed locomostion organelles

 

multi-cellular- certain cells capable of idnependent movement/locaomtion; skeletal muscle contration- due to sliding of actin filiaments

Term
which part of the cell is responsible for cytokinesis?
Definition
cytoskeleton
Term
explain the difference between the contactile ring and the phragmoplast
Definition

contctile ring is in animal cell and consists of actin microfilament that encricle the cell and serve to physciall "pinch" the cell in two,

 

while the phragmoplast is in plant cells and consists of actin microfilaments and microtubules and serves in building (positioning) a new cell wal between the separated nuclei of a dividing cell

Term
What ar the three main strucutral elements of the cytoskeleton?
Definition

microtubles (MTs)

microfilaments (MFs)

intermediate filaments (IFs)

Term
list the proteins that are assosiated with microtubles, microfilimanets, and intermediate filaments
Definition

microtubles- tubulin

microfilaments- actin

intermediate filaments- keratin

Term
Name and describe two groups of Microtubules
Definition

1. axonemal MTs- highly organized, stable found in subceullualr strucutres assoicated with cell movement

 

2. cytoplasmic MTs- loosely organized dynamic network loacted throughout the cytosol  (orgniazes cell shape, orientation of cellulose microfibrils, chromosome movement, cellular highway)

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