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BSI- Lectures 7, 8, 9, 10
BSI- Lectures 7, 8, 9 ,10
48
Science
Graduate
08/26/2013

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Term
The DNA in every cell contains all the genes to make a:
Definition
complete human
Term
But cells _______ express all genes
Definition
do not
Term
Genes expression can be regulated at many of the steps in the pathway from ____ to _____ to _____
Definition
DNA to RNA to Protein
Term
There are _____ to shut off certain genes in certain cell types
Definition
mechanisms
Term
DNA and histone modifications:
Definition
Methylation and acetylation
Term
______of DNA and/or histones usually turns genes off
Definition
methylation
Term
Methylation of DNA and/or histones usually turns genes ____
Definition
off
Term
______ leads to tighter packing of gene which turns the genes off
Definition
methylation
Term
____ of histones usually turns genes on
Definition
acetylation
Term
Acetylation of histones usually turns genes ____
Definition
on
Term
_____ of lysine residues on histone tails leads to looser packaging of gene
Definition
Acetylation
Term
Acetylation of ____ residues on histone tails leads to looser packaging of gene
Definition
Lysine
Term
Must be ______ to alter the rate of transcription if gene is turned on
Definition
mechanism
Term
_______ factors are proteins that bind to gene regulatory sequences upstream of the initiation site of a gene to stimulate or repress transcription
Definition
upstream transcription
Term
Upstream transcription factors are proteins that bind to gene regulatory sequences upstream of the initiation site of a gene to:
Definition
stimulate or repress transcription
Term
Genes are usually regulated by ______
Definition
several upstream transcription factors
Term
Activators promote assembly of ____
Definition
TIC
Term
______ promote assembly of TIC
Definition
TIC
Term
_____ hinder assembly of TIC
Definition
Repressors
Term
Repressors hinder assembly of _____
Definition
TIC
Term
The combination ____ and ______ determine the level of gene expression of a particular gene
Definition
Activators and repressors
Term
Alternative splicing produces variable ____ from a single ____
Definition
mRNA --- pre-mRNA
Term
Alternative splicing can alter protein function by:
Definition
1) Changing the chemical properties or shape of binding proteins. 2) Adding or deleting specific domains. 3) Adding or deleting post-translation modification sites.
Term
RNA splicing can be regulated negatively by a regulatory molecule by:
Definition
blocking a splice site
Term
RNA Splicing can be regulated positively by a regulatory molecule:
Definition
that helps direct splicing machinery to an otherwise overlooked splice site
Term
Multiple forms of the same protein that differ slightly in amino acid sequences
Definition
Isoforms (isoenzymes)
Term
Isoforms are multiple forms of the same protein that differ slight in:
Definition
amino acid sequence
Term
Control of mRNA transport out of nucleus
Definition
(refer to powerpoint)
Term
The three parts of translation control
Definition
Translation initiation, mRNA stability, and miRNA
Term
phosphorylation of eIF-2 inhibits ______
Definition
translation initiation
Term
phosphorylation of ____ inhibits translation initation
Definition
eIF-2
Term
degradation of poly-A-tail decreases ______
Definition
mRNA stability
Term
degradation of _______ decreases mRNA stability
Definition
poly-A-tail
Term
miRNA translation control:
Definition
1) short RNAs (21-23 nucleotides)
2) Bind to mRNA
3) Inhibits translation
Term
Control of the actin of a protein is also know as:
Definition
post-translational control
Term
Post-translational control:
Definition
1) Protein modification
2) Inhibitor binding
3) protein degradation
Term
A common variation of a DNA sequence or gene that differs by one base pair
Definition
Single nucleotide polymorphism (SNP)
Term
____ are point mutation that have been evolutionarily successful enough to recur in a significant proportion of the population
Definition
SNP (Single nucleotide polymorphism)
Term
____ can be anywhere in the genome.
Definition
SNP (Single nucleotide polymorphism)
Term
The location of ___ will determine the effect it has on the phenotype.
Definition
SNP (Single nucleotide polymorphism)
Term
____ can alter susceptibility to disease
Definition
SNP (Single nucleotide polymorphism)
Term
can alter response to drugs.
Definition
SNP (Single nucleotide polymorphism)
Term
Basis for pharmacogenomics when dealing with altering responses to drugs.
Definition
SNP (Single nucleotide polymorphism)
Term
Heritable changes in the genome that are NOT due to changes in the DNA sequence
Definition
Epigenetic
Term
_______ of DNA is one of the most common types of epigenetic modifications studied right now.
Definition
Methylation
Term
____ patters can alter expression pattern of genes
Definition
Methylation
Term
_____ patterns of some genes can be modified by environment (diet, stress, toxins, ect)
Definition
Methylation
Term
____ Patterns can be heritable.
Definition
Methylation
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