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Block 1
Innate and Adaptive Immunities
124
Immunology
Post-Graduate
02/06/2014

Additional Immunology Flashcards

 


 

Cards

Term
Calcineurin leads to what transcription factor activation?
Definition
NFAT
Term
What cleaves PIP2?
Definition
Phospholipase c-γ1
Term
What pathway does Cyclosporin A and FK506 block?
Definition
Calcium signaling/NFAT gene transcription activity
Term
What is PIP2 cleaved into when it interacts with Phospholipase c-γ1?
Definition
DAG and IP3
Term
What does DAG activate?
Definition
PKC and NF-kB activation
Term
What type of signaling is Ras considered?
Definition
Small G protein
Term
What does Ras promote?
Definition
MAP Kinase activation and transcription factor activation
Term
What do rac and rho regulate?
Definition
Cytoskeletal changes
Term
What are the co-stimulatory molecules of T and B cells?
Definition

T cells: CD 4, CD 8

 

B Cells: CD 19, CD21

Term
What are the chains of the CD3 complex?
Definition
ε,γ,δ,ζ
Term
What is the protein complex associated with the TCR?
Definition
CD3 Complex
Term
What is the protein complex associated with the BCR?
Definition
Ig α/β
Term
What is the src of the CD3 complex?
Definition
Lck
Term
What is the src of the Iga/b complex?
Definition
Lyn
Term
What promotes src family tyrosine kinase activity?
Definition
CD45
Term
What down regulates kinase activity/SFKs?
Definition
Csk
Term
What phosphorylates the ITAM in T cells?
Definition
ZAP70
Term
What phosphorylates the ITAM in B cells?
Definition
Syk
Term
What is the secondary signaling on T cells required for activation?
Definition
CD28 interaction with B7
Term
Aside from helping a T cell hone on secondary lymphoid organs and peripheral sites of inflammation, how does LFA-1 interaction with ICAM-1 on the APC affect T cells?
Definition
Acts as a secondary signal
Term
What is the "third signal" considered during APC/lymphocyte interaction?
Definition
cytokine interactions
Term
What is the "secondary" signal expressed on B cells that is needed for germinal center formation, isotype switching, and somatic hypermutation?
Definition
CD40 (on the B cell) interacting with CD40L
Term
JAK/STAT signaling pathway is used by what cytokine receptors?
Definition
Type 1 and 2
Term
What are the professional APCs?
Definition

DC

MO

B cells

Term
What does L-selectin interact with on the HEV to enter the LN?
Definition
addressins
Term
After L-selectin has loose interactions, what interaction pulls the lymphocytes into the HEV?
Definition
LFA-1/ICAM-1
Term
What interaction causes the egress of lymphocytes from the LN?
Definition
Sphingosine 1 Phosphate with S1P receptors
Term
How will a drug that affects S1P interaction in the LN affect the immune response?
Definition
It down-regulates the immune response because lymphocytes will get stuck in the LN and can't migrate to sites of peripheral inflammation.
Term
What types of protein expression changes occur in an activated T cell?
Definition

L-selectin down regulation

VLA-4 up-regulation

Term
What is the purpose of VLA-4?
Definition
It causes lymphocytes to migrate to sights of peripheral inflammation by binding to VCAM expressed.
Term
What causes the expression of VCAM?
Definition
Inflammatory cytokines such as TNF-α
Term
What T effector cell is responsible for killing virus-infected cells?
Definition
CD8 cytotoxic T cells (CTL)
Term
What T effector cell is responsible for enhancing the neutrophil response and promoting the barrier integrity?
Definition
CD4 TH17 cells
Term
What effector T cell is most involved in switching to IgE expression?
Definition
CD4 TH2 Cells
Term
What effector T cell targets parastites?
Definition
CD4 TH2 cells
Term
What cytokine will stimulate T reg Cells?
Definition
TGF-β
Term
What cytokine will stimulate T FH cells?
Definition
IL-6
Term
What cytokine will stimulate TH17 cells?
Definition
IL-6, TGF-β
Term
What cytokine will stimulate TH1 cells?
Definition
IL-12 and IFN-γ
Term
What cytokine will stimulate TH2 cells?
Definition
IL-4
Term
What receptor on the TH1 cell stimulates differentiation?
Definition

STAT4 

 

Term
What is the transcription factor that TH1 cells induce?
Definition
T-bet
Term
What immune response is involved in the Delayed Type Hypersensitivity (DTH)?
Definition
TH-1 mediated immune effector response
Term
What will the IFN-γ secreted by TH1 stimulate?
Definition
MOs and other cells will promote a particular inflammatory response associated with activated MOs.
Term
What will the IL-4,5,13 secreted by TH2 cells cause?
Definition

Helps B cells secrete certain antibodies (IgE)

Activates eosinophils

Promotes mucous production in lung and gut

 

"allergic inflammatory response"

Term
What receptor on the TH2 cell stimulates differentiation?
Definition
STAT6
Term
What is the transcription factor induced by TH2 cells?
Definition
GATA-3
Term
What cells causes the allergic inflammatory response?
Definition
TH2 cells via IL4/5/13
Term
What cytokine promotes IgE isotype switching?
Definition
IL-4
Term
What cytokine promotes eosinophil development and activation?
Definition
IL-5
Term
What cytokine promotes mucous production in lung/gut?
Definition
IL-13
Term
What is the transcription factor expressed by TH17 cells?
Definition
RORγt
Term
What cell helps promote immunity to the extracellular bacteria and fungi in the skin and mucousal sites?
Definition
TH17
Term
What is the transcription factor expressed by T reg cells?
Definition
FOXP3
Term
How can T reg cells down-regulate T cell immune responses?
Definition
By producing TGf-b
Term
What is the transcription factor expressed by T FH cells?
Definition
Bcl 6
Term
What is the main purpose of T FH cells?
Definition
The express homing to B cell follicle to help B cells and promote germinal center formation
Term
What will CTL cells express once they begin to differentiate?
Definition

perforin and granzyme

 

fas ligand

Term
What does fas ligand cause?
Definition
Interaction with FAS on target cells to activate caspases
Term
What cytokines allow for memory T cells to survive and develop?
Definition
IL-7 and IL-15
Term
Where are B2 (conventional) Cells found?
Definition
Follicles of the LN and spleen
Term
What are the MZ B cells particularly important for?
Definition

Humoral response to encapsulated bacteria.

 

Term
What is the main function of B1 cells?
Definition
Production of "natural" antibodies
Term
What is linked recognition?
Definition
Basically, T cell help to B cells is linked to the recognition of different epitope on the same antigenic complex
Term
In what cells does Somatic Hypermutation occur?
Definition
B cells
Term
Where does somatic hypermutation occur?
Definition
Germinal Centers
Term
What will somatic hypermutation cause?
Definition
Affinity Maturation
Term
What is the only immunoglobulin molecule whose expression is mediated by alternative mRNA processing?
Definition
IgD
Term
What area of the DNA is altered for Isotype switching?
Definition
Constant Heavy Domain
Term
What cytokines promote isotype switching?
Definition
CD40L/CD40
Term
What enzyme is involved in somatic hypermutation and isotype switching?
Definition
AID
Term
What cytokine promotes IgG1 to switch to IgE?
Definition
IL-4
Term
What cytokine promotes IgG1 to switch to IgG2?
Definition
IFN-γ
Term
What cytokine promotes IgG1 to switch to IgA?
Definition
TGF-β
Term
What will FcR cause the activation of?
Definition
Macrophages
Term
What will IgG FcR cause the activation of?
Definition
NK Cell
Term
What will IgE FcR cause the activation of?
Definition
Mast cell
Term
Where are complement proteins produced?
Definition
Liver
Term
What complement pathway is Antibody dependent?
Definition
Classical pathway.
Term
What antibodies are effective at activating the classical complement pathway and why?
Definition
IgM and IgG3 - the area in the hinge region can associate with C1 component.
Term
Which component of C3 convertase is the anaphylatoxin and which is the opsonin?
Definition

C3a - anaphylatoxin

C3b - opsonin

Term
What forms the membrane attack complex (MAC)?
Definition
C5b
Term
What is needed to start the Lectin complement pathway?
Definition
Mannose
Term
What are the roles of MBL and MASP in the lectin complement pathway?
Definition

MBL binds to lectins on the bacterial surface

 

MASPs cleave C4

Term
What initiates the Alternative Complement pathway?
Definition
The charged surfaces on bacteria, yeast, and parasites.
Term
Patients with a deficiency in GPI-linked anchors will have what?
Definition
Paroxysmal Nocturnal Hemoglobinuria (PNH)
Term
What is the function of MAC in the complement system?
Definition
Lysis
Term
What is the function of C3b during the complement system?
Definition
Opsonization/phagocytosis
Term
What is the function of C5a during the complement system?
Definition
Neutrophil chemotaxis
Term
What is the function of C3a, C5a during the complement system?
Definition
Anaphylatoxins (mast cell activation)
Term
What is the function of C4a during the complement system?
Definition
Weak anaphylatoxin
Term
What is the function of Complement Receptors on RBCs (i.e. CR1)?
Definition
Binds to immune complexes and transport them to the liver where MOs digest.
Term
What are examples of Pattern Recognition Receptors?
Definition
PAMPs and DAMPs
Term
What do Nod-like Receptors Bind to and where?
Definition
DAMPs - intracellular
Term
What do Toll-like receptors bind to?
Definition
PAMPs
Term
Which are germline encoded - Innate immunity receptors or T/B cell receptors?
Definition
Innate receptors
Term
What associates to form an inflammasome?
Definition
NALP and other molecules
Term
What are Nod-like Receptors with Pyrin-like Domains (NALP) important for?
Definition
IL-1β and IL-18 production
Term
What are P and E-selectin useful for?
Definition
They are expressed on the endothelial to help in-take neutrophils.
Term
What do plasmacytoid dendritic cells produce large amounts of?
Definition
Type I Interferons (IFN-a, IFN-b)
Term
What do plasmacytoid dendritic cells respond to?
Definition
Viral infections
Term
What is the purpose of NK cells?
Definition
Recognize and kill cells with intracellular organisms, particularly viruses.
Term
What do KIR receptors on NK cells recognize?
Definition
Low levels of MHC I induced by viral infection
Term
What do NK cells release to cause apoptosis?
Definition
Perforin, Granzymes
Term
How do TCR and BCR recognition differ?
Definition
BCR recognizes directly, TCR recognizes through MHC context.
Term
What are the hypervariable regions of the antigen receptor?
Definition
Complementary Determining Regions
Term
What is MHC restriction?
Definition
The T cell recognizes both self (MHC) and non-self (antigen peptide)
Term
What are superantigens?
Definition
They can bind directly to TCR and MHC without processing on the framework region.
Term
What gene expression is needed to undergo somatic recombination?
Definition
RAG gene
Term
How is ELISA used?
Definition
Antibodies are coated on the surface to detect and capture Antigen in the sample
Term
What is Flow Cytometry used for?
Definition
Detecting patterns of protein expression on complex mixtures of cell populations like blood leukocytes.
Term
What is the binding site on MHC I?
Definition
alpha 1 and alpha 2
Term
What is the binding site on MHC II?
Definition
alpha I and beta I
Term
Where is MHC I expressed?
Definition
All nucleated cells.
Term
Where are the proteins/pathogens of MHC I complexes from?
Definition
Endogenously/cytostolically derived
Term
What structures are used for MHC I formation?
Definition
Calnexin (to alpha), Calreticulin (to alpha and beta-2), TAP transporter, then a proteosome in the cytoplasm.
Term
Where are the antigens derived from for MHC II?
Definition
Exogenously/endocytotically
Term
What structures are used for MHC II formation?
Definition
Invariant chain (binding to alpha and beta), CLIP (binding to alpha and beta), HLA-DM (allowing peptide to bind)
Term
What is cross presentation?
Definition
Exogenously derived proteins access the MHC I complex (not the norm!).
Term
Where are MHC (HLA) genes located?
Definition
chromosone 6
Term
What are the genes for MHC I and II?
Definition

I: A, B, C

II: DP, DQ, DR

Term
How many alleles are there for the MHC I and II genes?
Definition
2 on each, exept MHC II DR, which has 4.
Term
What is allorecognition?
Definition
Developing an immune response to someone else's MHC
Term
What is the AIRE transcription factor?
Definition
Directs Medullary Epithelial cells to express proteins. Cells that recognize it will be negatively selected.
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