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Biology 111 Lab Practical #2
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66
Biology
Undergraduate 1
03/03/2013

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Term
exergonic reactions
Definition
free energy of products is less than free energy of reactants; spontaneous
Term
activation energy
Definition
initial energy input for reaction to proceed
Term
enzyme
Definition
biological catalyst; required for must life-sustaining processes
*usually proteins
Term
alkaline phophatase
Definition
catalyzes the removal of phosphate from molecules within a cell
Term
para-nitrophenyl-phosphate (pNPP)
Definition
synthetic substrate fro alkaline phosphatase
Term
para-nitophenol (pNP)
Definition
product of the hydrolysis of pNPP; yellow substance; absorbs blue light
Term
equation for hydrolysis of pNPP
Definition
pNPP-------------------> pNP + PO4
alkaline phosphatase
Term
6 parts of spectrophometer
Definition
light source, monochromator, test tube, light detector, amplifier, and readout
Term
independent variables of enzyme lab
Definition
enzyme concentration, initial substrate concentration, and pH
*change only 1 at a time while holding the other 2 constant
Term
dependent variable of enzyme lab
Definition
initial rate of reaction
Term
_____variable causes change in _______variable
Definition
independent; dependent
Term
purpose of buffer in enzyme lab
Definition
keep pH of reaction fixed
Term
relationship btwn enzyme concentration and initial reaction rate
(in enzyme lab)
Definition
they are directly proportional; as enzyme concentration increases, reaction rate increases
Term
relationship btwn initial substrate concentration and initial reaction rate
(in enzyme lab)
Definition
they are directly proportional, but eventually they level off because one substrate can only bind to 2 enzymes, and eventually all of the substrates are in use, with extra enzyme left
Term
relationship btwn pH and initial reaction rate
(in enzyme lab)
Definition
there is an optimal pH for the enzyme, and once it becomes too acidic, the enzyme won't work
Term
fertilization accomplishes:
(2 things)
Definition
a) activates oocyte (egg) so that it goes on to complete development
b) provides the means by which the haploid set of chromosomes of the sperm joins the haploid set of chromosomes of the egg
Term
fertilization membrane
Definition
long-term mechanical barrier taht helps to ensure that the zygote will be diploid; prevents polyspermy; lifts off the surface of the egg soon after first sperm makes contact
Term
polyspermy
Definition
entrance of more than one sperm into the egg
Term
3 prevention methods to polyspermy
Definition
a) long-term fertilization membrane
b) short-term and rapid electrical block
c) gametes are released into water which dilutes the egg and sperm
Term
holoblastic
Definition
describes cleavage in sea urchin; cleavage furrow cuts completely and quickly through the embryo
Term
polarity in sea urchin
Definition
nucleus is offset towards the animal pole, away from vegetal pole
Term
directionality of 1st cleavage in sea urchin
Definition
vertical; begins at animal pole and progresses to vegetal pole; creates 2 side-by-side blastomeres
Term
directionality of 2nd cleavage in sea urchin
Definition
vertical; at a right angle to first cleavage
Term
directionality of 3rd cleavage in sea urchin
Definition
horizontal; cuts 4 existing blastomeres into 8
Term
morula
(echinoderm)
Definition
when embryo is divided into 16 blastomeres
Term
blastocoel
(echinoderm)
Definition
cavity formed by ball of cells; signifies cell becoming a blastula
Term
gastrulation
(echinoderm)
Definition
a) few cells of vegetal pole detach and migrate into interior of embryo (primary mesenchyme cells or mesoderm)
b) vegetal pole buckles inward and extends from interior of embryo forming endoderm
*classic pushing in the leaky tennis ball: an invagination from the vegetal pole into the blastocoel
Term
mesoderm
(echinoderm)
Definition
cells that will form the skeleton of the larva
Term
endoderm
(echinoderm)
Definition
becomes primitive gut (aka archenteron)
Term
ectoderm
(echinoderm)
Definition
outside of cell; develops into the outer regions of larva
Term
blastopore
(echinoderm)
Definition
original opening of gastrula; becomes anus of larva
Term
difference btwn oocyte, egg, and zygote
Definition
oocyte is what is being fertilized
egg is before fertilization
zygots is after sperm and egg combine (diploid)
Term
biochemical consequences of egg activation
Definition
Increase in DNA synthesis.
Increase in RNA synthesis
Increase in protein synthesis.
Term
restoration of diploid condition during fertilization:
Definition
chromosomes of egg must join chromosomes of sperm
Term
where is yolk concentrated in amphibian egg?
Definition
yolk is more dense and conventrated in the vegetal hemisphere that in the animal hemisphere
Term
determination of polarity
(amphibian egg)
Definition
offset of nucleus toward animal pole and animal-vegetal polarization of yolk
*external pigment fo egg on animal half and non-pigmented on vegetal half
Term
gray crescent
Definition
shift of pigment so that a crescent of grayish hue is formed at what will ultimately be the dorsal region of the embryo
Term
effects of yolk on development:
Definition
effects progress of cleavage, morphology of the blastula, and the way that gastrulation occurs
Term
directionality of cleavage
(amphibians)
Definition
starts at the animal pole and proceeds to vegetal pole
*cleavage furrow slows as it plows through cytoplasm of vegetal side because of high concentration of yolk
*common for second cleavage to begin before first cleavage has ended
Term
2nd and 3rd cleavage directionality
(amphibians)
Definition
-second is vertical from animal pole and perpendicular to first cleavage
-3rd is horizontal and is offset toward animal pole so upper tier of blastomeres is smaller than the lower one
**more rapid in animal hemisphere so animal hemisphere blastomeres continues to be smaller
Term
blastocoel
(amphibian)
Definition
restricted to animal hemisphere because the vegetal hemisphere is solid with large, yolk-packed cells
Term
gastrulation
(amphibians)
Definition
begins at ventral margin where gray crescent has been, rather than vegetal pole; cells from ventral margin begin to migrate into the interior of the embryo, producing a blastopore and archenteron
*an involution of cells just ventral to where the gray crescent was located in the zygote; this inward movement continues as cells of the animal hemisphere migrate down over the larger yolky cells of the vegetal hemisphere
Term
endoderm
(amphibians)
Definition
located within; gives rise to the gut, digestive organs such as the pancreas and liver, and lungs
Term
ectoderm
(amphibians)
Definition
outside; develops into the outer layer of the skin and the nervous system
Term
mesoderm
(amphibians)
Definition
in between; forms many structures including muscle, bone, blood, kidneys, and gonads
Term
central nervous system
CNS
Definition
begins as a thickening of the layer of cells that overlies the upper cells of archenteron--archenteron roof--neural plate folds into neural tube that becomes brain and spinal cord
Term
blastodisc
(chicken)
Definition
very small portion of cell at animal pole that is free enough from yolk to have any cleavage occur at all
Term
cleavage
(chicken)
Definition
first several cleavages are vertical and extend only a short distance downward; horizontal cleavages eventually occur, giving rise to several layers of blastomeres tha tmake up a disc of cells situated on top of the mass of yolk below
Term
gastrulation
(chicken)
Definition
initiated by separation of cells from lower surface of blastoderm, forming a flimsy layer of endoderm--hypoblast--below epiblast
*two steps: a lower layer of blastodisc cells migrates away, forming a layer of hypoblast cells below the epiblast (which the remaining cells of the blastodisc are now known as). Then, as the hypoblast expands, the epiblast cells migrate rearwards and medially to form the primitive streak, through which streak cells migrate to form the mesoblast, a layer of cell between the epiblast and the hypoblast
Term
blastocoel
(chicken)
Definition
space btwn hypoblast and epiblast
Term
primitive streak
(chicken)
Definition
thickened region of epiblast from hypoblast expansion and migration of cells from epiblast toward posterior and central region
Term
notochord
(chicken)
Definition
formed from cells of primitive streak migrating to blastocoel, forming a middle layer of cells
Term
neural tube
(chicken)
Definition
formed from folding of neural plate; forms the brain at its broad antierior end and the spinal cord at its narrower posterior end
Term
optic vesicles
(chicken)
Definition
formed from anterio-lateral region of brain; will become the eyes
Term
cerebral vesicles
(chicken)
Definition
formed from anterior region of brain; will later develop into the cerebral hemispheres of the brain--most prominant feature of brain
Term
somites
(chicken)
Definition
blocks of mesoderm; develop from many structures life vertebrade and protect the spinal cord, dermis of skin, and muscles
Term
polarity
(chicken)
Definition
blastodisc is free from yolk, preventing cleavage
Term
blastocoel shapes
Definition
echinoderm: circular
amphibian: oval
chicken: like an eye
Term
polarity in amphibian
Definition
in addition to the nucleus being offset toward the animal pole, there is more dense yolk in the vegetal hemisphere than in the animal hemisphere, and there is pigment on the surface of the animal hemisphere
Term
cleavage
(echinoderms)
Definition
holoblastic
Term
cleavage
(amphibians)
Definition
holoblastic but slow at vegetal pole
Term
cleavage
(chicken)
Definition
restricted to the animal pole
The first several cleavages are vertical, and extend only a very short distance downward; horizontal cleavages eventually occur, which give rise to several layers of blastomeres that make up a disc of cells situated on top of the mass of yolk below
Term
blastula
(echinoderm)
Definition
the wall of the blastula is one-cell thick all around; the blastocoel forms so that it occupies the animal and vegetal hemispheres essentially equally
Term
blastula
(amphibian)
Definition
, the floor of the blastocoel is considerably thicker than the roof of the blastocoel. The blastocoel forms essentially exclusively in the animal hemisphere of the blastula
Term
blastula
(chicken)
Definition
, the blastocoel is a very narrow space underlying the blastodisc, sitting on an enormous amount of yolk
Term
derivatives of ectoderm, mesoderm, and endoderm
Definition
Ectoderm: epidermis of the skin, hair, nails, lens, cornea, entire nervous system; lining of the nose and mouth.
Mesoderm: muscle, bone, cartilage, notochord, blood, kidneys, gonads.
Endoderm: Lining of esophagus, stomach, intestine; lungs, liver, pancreas, thyroid, parathyroids, bladder lining.
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